RNA–Protein interactions for RNA: ENST00000511198.5

GYPB-212, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 444 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-212ENST00000511198 TSSK4Q6SA08 328 aa6.33□□□□□ -1.4
GYPB-212ENST00000511198 SPATS2Q86XZ4 545 aaKnown RBP6.33□□□□□ -1.4
GYPB-212ENST00000511198 FBXO18Q8NFZ0 1043 aa6.33□□□□□ -1.4
GYPB-212ENST00000511198 ZFP28Q8NHY6 868 aa6.33□□□□□ -1.4
GYPB-212ENST00000511198 COG1Q8WTW3 980 aa6.33□□□□□ -1.4
GYPB-212ENST00000511198 POF1BQ8WVV4 589 aa6.33□□□□□ -1.4
GYPB-212ENST00000511198 MTG1Q9BT17 334 aaPredicted RBP6.33□□□□□ -1.4
GYPB-212ENST00000511198 KRTAP17-1Q9BYP8 105 aa6.33□□□□□ -1.4
GYPB-212ENST00000511198 DHX36Q9H2U1 1008 aaKnown RBP6.33□□□□□ -1.4
GYPB-212ENST00000511198 RBM12Q9NTZ6 932 aaKnown RBP6.33□□□□□ -1.4
GYPB-212ENST00000511198 CCM2LQ9NUG4 571 aaPredicted RBP6.33□□□□□ -1.4
GYPB-212ENST00000511198 PRKAB1Q9Y478 270 aa6.33□□□□□ -1.4
GYPB-212ENST00000511198 RIPK3Q9Y572 518 aa6.33□□□□□ -1.4
GYPB-212ENST00000511198 PARP14Q460N5 1801 aa6.33□□□□□ -1.4
GYPB-212ENST00000511198 DNHD1Q96M86 4753 aa6.33□□□□□ -1.4
GYPB-212ENST00000511198 RALGAPA1Q6GYQ0 2036 aa6.32□□□□□ -1.4
GYPB-212ENST00000511198 SHROOM3Q8TF72 1996 aa6.32□□□□□ -1.4
GYPB-212ENST00000511198 K7ESF4 209 aa6.32□□□□□ -1.4
GYPB-212ENST00000511198 PARNO95453 639 aaKnown RBP6.32□□□□□ -1.4
GYPB-212ENST00000511198 IFIT1P09914 478 aaKnown RBP6.32□□□□□ -1.4
GYPB-212ENST00000511198 ECHS1P30084 290 aa6.32□□□□□ -1.4
GYPB-212ENST00000511198 MALLQ13021 153 aa6.32□□□□□ -1.4
GYPB-212ENST00000511198 DUSP6Q16828 381 aa6.32□□□□□ -1.4
GYPB-212ENST00000511198 ZNF618Q5T7W0 954 aa6.32□□□□□ -1.4
GYPB-212ENST00000511198 DZIP1Q86YF9 867 aaKnown RBP6.32□□□□□ -1.4
GYPB-212ENST00000511198 PLXDC1Q8IUK5 500 aa6.32□□□□□ -1.4
GYPB-212ENST00000511198 TEX11Q8IYF3 940 aa6.32□□□□□ -1.4
GYPB-212ENST00000511198 FBXO28Q9NVF7 368 aa6.32□□□□□ -1.4
GYPB-212ENST00000511198 DNAJC28Q9NX36 388 aa6.32□□□□□ -1.4
GYPB-212ENST00000511198 NOP58Q9Y2X3 529 aaKnown RBP6.32□□□□□ -1.4
GYPB-212ENST00000511198 Q9Y3F1 56 aa6.32□□□□□ -1.4
GYPB-212ENST00000511198 PATJQ8NI35 1801 aa6.32□□□□□ -1.4
GYPB-212ENST00000511198 UTP20O75691 2785 aaKnown RBP6.31□□□□□ -1.4
GYPB-212ENST00000511198 NDUFA10O95299 355 aa6.31□□□□□ -1.4
GYPB-212ENST00000511198 PPP2R1AP30153 589 aa6.31□□□□□ -1.4
GYPB-212ENST00000511198 DEKP35659 375 aaKnown RBP6.31□□□□□ -1.4
GYPB-212ENST00000511198 CHN2P52757 468 aa6.31□□□□□ -1.4
GYPB-212ENST00000511198 RIPPLY3P57055 190 aa6.31□□□□□ -1.4
GYPB-212ENST00000511198 SP140Q13342 867 aa6.31□□□□□ -1.4
GYPB-212ENST00000511198 SF3A2Q15428 464 aaKnown RBP6.31□□□□□ -1.4
GYPB-212ENST00000511198 TRIM71Q2Q1W2 868 aaKnown RBP6.31□□□□□ -1.4
GYPB-212ENST00000511198 ATXN7L2Q5T6C5 722 aaPredicted RBP6.31□□□□□ -1.4
GYPB-212ENST00000511198 STPG1Q5TH74 334 aa6.31□□□□□ -1.4
GYPB-212ENST00000511198 MAPKAPK5Q8IW41 473 aa6.31□□□□□ -1.4
GYPB-212ENST00000511198 ARHGEF19Q8IW93 802 aa6.31□□□□□ -1.4
GYPB-212ENST00000511198 PQLC1Q8N2U9 271 aa6.31□□□□□ -1.4
GYPB-212ENST00000511198 TDRD5Q8NAT2 981 aaKnown RBP6.31□□□□□ -1.4
GYPB-212ENST00000511198 LINS1Q8NG48 757 aa6.31□□□□□ -1.4
GYPB-212ENST00000511198 GPR150Q8NGU9 434 aa6.31□□□□□ -1.4
GYPB-212ENST00000511198 P2RX5Q93086 422 aa6.31□□□□□ -1.4
GYPB-212ENST00000511198 IFIH1Q9BYX4 1025 aaKnown RBP6.31□□□□□ -1.4
GYPB-212ENST00000511198 MYH16Q9H6N6 1097 aa6.31□□□□□ -1.4
GYPB-212ENST00000511198 ABCF2Q9UG63 623 aa6.31□□□□□ -1.4
GYPB-212ENST00000511198 SIK3Q9Y2K2 1263 aa6.31□□□□□ -1.4
GYPB-212ENST00000511198 CREBBPQ92793 2442 aa6.31□□□□□ -1.4
GYPB-212ENST00000511198 SETD2Q9BYW2 2564 aaPredicted RBP6.31□□□□□ -1.4
GYPB-212ENST00000511198 PLXNA4Q9HCM2 1894 aa6.3□□□□□ -1.4
GYPB-212ENST00000511198 MARCH11A6NNE9 402 aa6.3□□□□□ -1.4
GYPB-212ENST00000511198 VWA5AO00534 786 aa6.3□□□□□ -1.4
GYPB-212ENST00000511198 B3GALT2O43825 422 aa6.3□□□□□ -1.4
GYPB-212ENST00000511198 MAP4K4O95819 1239 aaPredicted RBP6.3□□□□□ -1.4
GYPB-212ENST00000511198 MMP3P08254 477 aa6.3□□□□□ -1.4
GYPB-212ENST00000511198 HSPA5P11021 654 aaKnown RBP6.3□□□□□ -1.4
GYPB-212ENST00000511198 TMPOP42166 694 aaKnown RBP6.3□□□□□ -1.4
GYPB-212ENST00000511198 NOVA1P51513 510 aaKnown RBP6.3□□□□□ -1.4
GYPB-212ENST00000511198 CNTN2Q02246 1040 aa6.3□□□□□ -1.4
GYPB-212ENST00000511198 SEPT2Q15019 361 aa6.3□□□□□ -1.4
GYPB-212ENST00000511198 PUM3Q15397 648 aaKnown RBP6.3□□□□□ -1.4
GYPB-212ENST00000511198 AGAP9Q5VTM2 703 aa6.3□□□□□ -1.4
GYPB-212ENST00000511198 AFMIDQ63HM1 303 aa6.3□□□□□ -1.4
GYPB-212ENST00000511198 SNRNP48Q6IEG0 339 aaKnown RBP6.3□□□□□ -1.4
GYPB-212ENST00000511198 FAM180AQ6UWF9 173 aa6.3□□□□□ -1.4
GYPB-212ENST00000511198 ATG9AQ7Z3C6 839 aa6.3□□□□□ -1.4
GYPB-212ENST00000511198 C8orf58Q8NAV2 365 aa6.3□□□□□ -1.4
GYPB-212ENST00000511198 PJA1Q8NG27 643 aa6.3□□□□□ -1.4
GYPB-212ENST00000511198 STON2Q8WXE9 905 aa6.3□□□□□ -1.4
GYPB-212ENST00000511198 KAZALD1Q96I82 304 aa6.3□□□□□ -1.4
GYPB-212ENST00000511198 ADAM2Q99965 735 aa6.3□□□□□ -1.4
GYPB-212ENST00000511198 SERHL2Q9H4I8 314 aa6.3□□□□□ -1.4
GYPB-212ENST00000511198 SAP30BPQ9UHR5 308 aaKnown RBP6.3□□□□□ -1.4
GYPB-212ENST00000511198 KLK13Q9UKR3 277 aa6.3□□□□□ -1.4
GYPB-212ENST00000511198 PACSIN3Q9UKS6 424 aa6.3□□□□□ -1.4
GYPB-212ENST00000511198 NEUROG3Q9Y4Z2 214 aa6.3□□□□□ -1.4
GYPB-212ENST00000511198 FLNCQ14315 2725 aa6.3□□□□□ -1.4
GYPB-212ENST00000511198 NF1P21359 2839 aa6.29□□□□□ -1.4
GYPB-212ENST00000511198 OSMP13725 252 aa6.29□□□□□ -1.4
GYPB-212ENST00000511198 GSPT1P15170 499 aaKnown RBP6.29□□□□□ -1.4
GYPB-212ENST00000511198 HOXB8P17481 243 aaPredicted RBP6.29□□□□□ -1.4
GYPB-212ENST00000511198 PHKA1P46020 1223 aa6.29□□□□□ -1.4
GYPB-212ENST00000511198 SLC6A9P48067 706 aa6.29□□□□□ -1.4
GYPB-212ENST00000511198 SLC5A3P53794 718 aa6.29□□□□□ -1.4
GYPB-212ENST00000511198 NOMO1Q15155 1222 aa6.29□□□□□ -1.4
GYPB-212ENST00000511198 ABCB5Q2M3G0 1257 aa6.29□□□□□ -1.4
GYPB-212ENST00000511198 AASDHQ4L235 1098 aaPredicted RBP6.29□□□□□ -1.4
GYPB-212ENST00000511198 SPICE1Q8N0Z3 855 aa6.29□□□□□ -1.4
GYPB-212ENST00000511198 CPEB3Q8NE35 698 aaKnown RBP6.29□□□□□ -1.4
GYPB-212ENST00000511198 KLHDC4Q8TBB5 520 aa6.29□□□□□ -1.4
GYPB-212ENST00000511198 LPIN2Q92539 896 aa6.29□□□□□ -1.4
GYPB-212ENST00000511198 ZNF689Q96CS4 500 aaPredicted RBP6.29□□□□□ -1.4
GYPB-212ENST00000511198 NECTIN4Q96NY8 510 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms