RNA–Protein interactions for RNA: ENST00000510245.1

CAST-231, Transcript of calpastatin, human

TSL 4

Gene CAST, Length 561 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CAST-231	ENST00000510245	TRIM8	Q9BZR9	551 aa		8.31	□□□□□ -1.08
CAST-231	ENST00000510245	CHST12	Q9NRB3	414 aa		8.31	□□□□□ -1.08
CAST-231	ENST00000510245	MARCH5	Q9NX47	278 aa		8.31	□□□□□ -1.08
CAST-231	ENST00000510245	G3BP2	Q9UN86	482 aa	Known RBP	8.31	□□□□□ -1.08
CAST-231	ENST00000510245	HEMK1	Q9Y5R4	338 aa	Predicted RBP	8.31	□□□□□ -1.08
CAST-231	ENST00000510245	SPAG17	Q6Q759	2223 aa		8.3	□□□□□ -1.08
CAST-231	ENST00000510245	HRK	O00198	91 aa		8.3	□□□□□ -1.08
CAST-231	ENST00000510245	RNF113A	O15541	343 aa	Known RBP	8.3	□□□□□ -1.08
CAST-231	ENST00000510245	HBP1	O60381	514 aa		8.3	□□□□□ -1.08
CAST-231	ENST00000510245	MAF	O75444	373 aa	Predicted RBP	8.3	□□□□□ -1.08
CAST-231	ENST00000510245	POU2F2	P09086	479 aa		8.3	□□□□□ -1.08
CAST-231	ENST00000510245	EIF2S3	P41091	472 aa	Known RBP	8.3	□□□□□ -1.08
CAST-231	ENST00000510245	SLC26A2	P50443	739 aa		8.3	□□□□□ -1.08
CAST-231	ENST00000510245	MTMR1	Q13613	665 aa		8.3	□□□□□ -1.08
CAST-231	ENST00000510245	SLC5A9	Q2M3M2	681 aa		8.3	□□□□□ -1.08
CAST-231	ENST00000510245	USP41	Q3LFD5	358 aa		8.3	□□□□□ -1.08
CAST-231	ENST00000510245	USP39	Q53GS9	565 aa	Known RBP	8.3	□□□□□ -1.08
CAST-231	ENST00000510245	ASPRV1	Q53RT3	343 aa		8.3	□□□□□ -1.08
CAST-231	ENST00000510245	STEAP3	Q658P3	488 aa		8.3	□□□□□ -1.08
CAST-231	ENST00000510245	RPTN	Q6XPR3	784 aa		8.3	□□□□□ -1.08
CAST-231	ENST00000510245	RALGPS2	Q86X27	583 aa	Predicted RBP	8.3	□□□□□ -1.08
CAST-231	ENST00000510245	NOSTRIN	Q8IVI9	506 aa		8.3	□□□□□ -1.08
CAST-231	ENST00000510245	RNF168	Q8IYW5	571 aa	Predicted RBP	8.3	□□□□□ -1.08
CAST-231	ENST00000510245	PGBD4	Q96DM1	585 aa		8.3	□□□□□ -1.08
CAST-231	ENST00000510245	SEMA4C	Q9C0C4	833 aa		8.3	□□□□□ -1.08
CAST-231	ENST00000510245	SLC6A20	Q9NP91	592 aa		8.3	□□□□□ -1.08
CAST-231	ENST00000510245	EMC7	Q9NPA0	242 aa		8.3	□□□□□ -1.08
CAST-231	ENST00000510245	OXSM	Q9NWU1	459 aa		8.3	□□□□□ -1.08
CAST-231	ENST00000510245	DSE	Q9UL01	958 aa		8.3	□□□□□ -1.08
CAST-231	ENST00000510245	COL5A1	P20908	1838 aa	Predicted RBP	8.3	□□□□□ -1.08
CAST-231	ENST00000510245	COL1A2	P08123	1366 aa		8.3	□□□□□ -1.08
CAST-231	ENST00000510245	PTPRQ	Q9UMZ3	2332 aa		8.3	□□□□□ -1.08
CAST-231	ENST00000510245	C2CD3	Q4AC94	2353 aa		8.29	□□□□□ -1.08
CAST-231	ENST00000510245	COL12A1	Q99715	3063 aa		8.29	□□□□□ -1.08
CAST-231	ENST00000510245	MYH7	P12883	1935 aa		8.29	□□□□□ -1.08
CAST-231	ENST00000510245	SLC12A8	A0AV02	714 aa		8.29	□□□□□ -1.08
CAST-231	ENST00000510245	MYBPHL	A2RUH7	354 aa		8.29	□□□□□ -1.08
CAST-231	ENST00000510245	SLC27A2	O14975	620 aa		8.29	□□□□□ -1.08
CAST-231	ENST00000510245	SH3BP5	O60239	455 aa		8.29	□□□□□ -1.08
CAST-231	ENST00000510245	BRINP1	O60477	761 aa		8.29	□□□□□ -1.08
CAST-231	ENST00000510245	C22orf31	O95567	290 aa		8.29	□□□□□ -1.08
CAST-231	ENST00000510245	APBB3	O95704	486 aa		8.29	□□□□□ -1.08
CAST-231	ENST00000510245	POMC	P01189	267 aa		8.29	□□□□□ -1.08
CAST-231	ENST00000510245	ZFY	P08048	801 aa	Predicted RBP	8.29	□□□□□ -1.08
CAST-231	ENST00000510245	DBH	P09172	617 aa		8.29	□□□□□ -1.08
CAST-231	ENST00000510245	CD59	P13987	128 aa		8.29	□□□□□ -1.08
CAST-231	ENST00000510245	ADSS	P30520	456 aa		8.29	□□□□□ -1.08
CAST-231	ENST00000510245	VIPR2	P41587	438 aa		8.29	□□□□□ -1.08
CAST-231	ENST00000510245	RAB27A	P51159	221 aa		8.29	□□□□□ -1.08
CAST-231	ENST00000510245	DGKE	P52429	567 aa		8.29	□□□□□ -1.08
CAST-231	ENST00000510245	IRF9	Q00978	393 aa		8.29	□□□□□ -1.08
CAST-231	ENST00000510245	RHD	Q02161	417 aa		8.29	□□□□□ -1.08
CAST-231	ENST00000510245	GFPT1	Q06210	699 aa	Predicted RBP	8.29	□□□□□ -1.08
CAST-231	ENST00000510245	TRAF1	Q13077	416 aa		8.29	□□□□□ -1.08
CAST-231	ENST00000510245	LY6D	Q14210	128 aa		8.29	□□□□□ -1.08
CAST-231	ENST00000510245	NR1I3	Q14994	352 aa		8.29	□□□□□ -1.08
CAST-231	ENST00000510245	SEC23A	Q15436	765 aa		8.29	□□□□□ -1.08
CAST-231	ENST00000510245	ZNF484	Q5JVG2	852 aa		8.29	□□□□□ -1.08
CAST-231	ENST00000510245	PAQR3	Q6TCH7	311 aa		8.29	□□□□□ -1.08
CAST-231	ENST00000510245	SPATS2	Q86XZ4	545 aa	Known RBP	8.29	□□□□□ -1.08
CAST-231	ENST00000510245	MARCH9	Q86YJ5	346 aa		8.29	□□□□□ -1.08
CAST-231	ENST00000510245	KRTAP1-3	Q8IUG1	177 aa		8.29	□□□□□ -1.08
CAST-231	ENST00000510245	GPR65	Q8IYL9	337 aa		8.29	□□□□□ -1.08
CAST-231	ENST00000510245	GALNT15	Q8N3T1	639 aa		8.29	□□□□□ -1.08
CAST-231	ENST00000510245	MINDY1	Q8N5J2	469 aa		8.29	□□□□□ -1.08
CAST-231	ENST00000510245	TTC8	Q8TAM2	541 aa		8.29	□□□□□ -1.08
CAST-231	ENST00000510245	SMARCD2	Q92925	531 aa		8.29	□□□□□ -1.08
CAST-231	ENST00000510245	MTMR8	Q96EF0	704 aa		8.29	□□□□□ -1.08
CAST-231	ENST00000510245	KIF1BP	Q96EK5	621 aa		8.29	□□□□□ -1.08
CAST-231	ENST00000510245	ZNF668	Q96K58	619 aa	Predicted RBP	8.29	□□□□□ -1.08
CAST-231	ENST00000510245	SMAD5	Q99717	465 aa	Known RBP	8.29	□□□□□ -1.08
CAST-231	ENST00000510245	BOC	Q9BWV1	1114 aa		8.29	□□□□□ -1.08
CAST-231	ENST00000510245	GCM1	Q9NP62	436 aa		8.29	□□□□□ -1.08
CAST-231	ENST00000510245	FSCN3	Q9NQT6	498 aa		8.29	□□□□□ -1.08
CAST-231	ENST00000510245	SLC9A2	Q9UBY0	812 aa		8.29	□□□□□ -1.08
CAST-231	ENST00000510245	COL4A2	P08572	1712 aa		8.29	□□□□□ -1.08
CAST-231	ENST00000510245	DOCK5	Q9H7D0	1870 aa		8.28	□□□□□ -1.08
CAST-231	ENST00000510245	CREBBP	Q92793	2442 aa		8.28	□□□□□ -1.08
CAST-231	ENST00000510245	ASCC3	Q8N3C0	2202 aa	Known RBP	8.28	□□□□□ -1.08
CAST-231	ENST00000510245	ALG1L2	C9J202	215 aa		8.28	□□□□□ -1.08
CAST-231	ENST00000510245	SCD	O00767	359 aa		8.28	□□□□□ -1.08
CAST-231	ENST00000510245	DVL2	O14641	736 aa		8.28	□□□□□ -1.08
CAST-231	ENST00000510245	ZBTB5	O15062	677 aa		8.28	□□□□□ -1.08
CAST-231	ENST00000510245	IPO8	O15397	1037 aa	Known RBP	8.28	□□□□□ -1.08
CAST-231	ENST00000510245	S100B	P04271	92 aa	Predicted RBP	8.28	□□□□□ -1.08
CAST-231	ENST00000510245	PARP1	P09874	1014 aa	Known RBP	8.28	□□□□□ -1.08
CAST-231	ENST00000510245	HLA-E	P13747	358 aa		8.28	□□□□□ -1.08
CAST-231	ENST00000510245	TRIM27	P14373	513 aa		8.28	□□□□□ -1.08
CAST-231	ENST00000510245	DARS	P14868	501 aa	Known RBP	8.28	□□□□□ -1.08
CAST-231	ENST00000510245	DPP6	P42658	865 aa		8.28	□□□□□ -1.08
CAST-231	ENST00000510245	LSS	P48449	732 aa		8.28	□□□□□ -1.08
CAST-231	ENST00000510245	CLCN3	P51790	818 aa		8.28	□□□□□ -1.08
CAST-231	ENST00000510245	ACTR2	P61160	394 aa		8.28	□□□□□ -1.08
CAST-231	ENST00000510245	ATP13A4	Q4VNC1	1196 aa		8.28	□□□□□ -1.08
CAST-231	ENST00000510245	RNF219	Q5W0B1	726 aa	Predicted RBP	8.28	□□□□□ -1.08
CAST-231	ENST00000510245	PRSS55	Q6UWB4	352 aa	Predicted RBP	8.28	□□□□□ -1.08
CAST-231	ENST00000510245	SYT12	Q8IV01	421 aa		8.28	□□□□□ -1.08
CAST-231	ENST00000510245	NAXD	Q8IW45	347 aa		8.28	□□□□□ -1.08
CAST-231	ENST00000510245	RAVER1	Q8IY67	606 aa	Known RBP	8.28	□□□□□ -1.08
CAST-231	ENST00000510245	KBTBD3	Q8NAB2	608 aa		8.28	□□□□□ -1.08

Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms