RNA–Protein interactions for RNA: ENST00000509206.1

RNF4-211, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 490 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-211ENST00000509206 USP9YO00507 2555 aaPredicted RBP4.1□□□□□ -1.75
RNF4-211ENST00000509206 A0A087X0B3 334 aa4.1□□□□□ -1.75
RNF4-211ENST00000509206 A1L4Q6 167 aa4.1□□□□□ -1.75
RNF4-211ENST00000509206 FAM47DPA6NHR8 397 aa4.1□□□□□ -1.75
RNF4-211ENST00000509206 KCNJ18B7U540 433 aa4.1□□□□□ -1.75
RNF4-211ENST00000509206 WASH3PC4AMC7 463 aa4.1□□□□□ -1.75
RNF4-211ENST00000509206 NEDD8-MDP1E9PL57 170 aa4.1□□□□□ -1.75
RNF4-211ENST00000509206 CCER2I3L3R5 266 aa4.1□□□□□ -1.75
RNF4-211ENST00000509206 CLDN3O15551 220 aa4.1□□□□□ -1.75
RNF4-211ENST00000509206 PAPSS1O43252 624 aaPredicted RBP4.1□□□□□ -1.75
RNF4-211ENST00000509206 EDIL3O43854 480 aa4.1□□□□□ -1.75
RNF4-211ENST00000509206 VPS4BO75351 444 aa4.1□□□□□ -1.75
RNF4-211ENST00000509206 NOL4O94818 638 aa4.1□□□□□ -1.75
RNF4-211ENST00000509206 RECKO95980 971 aa4.1□□□□□ -1.75
RNF4-211ENST00000509206 RPLP1P05386 114 aaKnown RBP4.1□□□□□ -1.75
RNF4-211ENST00000509206 CYP11B2P19099 503 aa4.1□□□□□ -1.75
RNF4-211ENST00000509206 CYP2F1P24903 491 aa4.1□□□□□ -1.75
RNF4-211ENST00000509206 CASRP41180 1078 aa4.1□□□□□ -1.75
RNF4-211ENST00000509206 TXKP42681 527 aa4.1□□□□□ -1.75
RNF4-211ENST00000509206 PPP3CCP48454 512 aa4.1□□□□□ -1.75
RNF4-211ENST00000509206 AARSP49588 968 aaKnown RBP eCLIP4.1□□□□□ -1.75
RNF4-211ENST00000509206 DGKGP49619 791 aa4.1□□□□□ -1.75
RNF4-211ENST00000509206 ZNF132P52740 706 aa4.1□□□□□ -1.75
RNF4-211ENST00000509206 CDH8P55286 799 aa4.1□□□□□ -1.75
RNF4-211ENST00000509206 RACK1P63244 317 aaKnown RBP4.1□□□□□ -1.75
RNF4-211ENST00000509206 SLC7A9P82251 487 aa4.1□□□□□ -1.75
RNF4-211ENST00000509206 GRIN1Q05586 938 aa4.1□□□□□ -1.75
RNF4-211ENST00000509206 SAFBQ15424 915 aaKnown RBP eCLIP4.1□□□□□ -1.75
RNF4-211ENST00000509206 ENOX2Q16206 610 aaKnown RBP4.1□□□□□ -1.75
RNF4-211ENST00000509206 TSNAXIP1Q2TAA8 658 aa4.1□□□□□ -1.75
RNF4-211ENST00000509206 GAB4Q2WGN9 574 aa4.1□□□□□ -1.75
RNF4-211ENST00000509206 SLC10A6Q3KNW5 377 aa4.1□□□□□ -1.75
RNF4-211ENST00000509206 KRTAP21-3Q3LHN1 58 aa4.1□□□□□ -1.75
RNF4-211ENST00000509206 FUT11Q495W5 492 aa4.1□□□□□ -1.75
RNF4-211ENST00000509206 C8orf34Q49A92 452 aa4.1□□□□□ -1.75
RNF4-211ENST00000509206 SEZ6Q53EL9 994 aa4.1□□□□□ -1.75
RNF4-211ENST00000509206 MPZL3Q6UWV2 235 aa4.1□□□□□ -1.75
RNF4-211ENST00000509206 NEK8Q86SG6 692 aa4.1□□□□□ -1.75
RNF4-211ENST00000509206 LRRTM3Q86VH5 581 aa4.1□□□□□ -1.75
RNF4-211ENST00000509206 ZC3H18Q86VM9 953 aaKnown RBP4.1□□□□□ -1.75
RNF4-211ENST00000509206 CHD1LQ86WJ1 897 aa4.1□□□□□ -1.75
RNF4-211ENST00000509206 CCDC83Q8IWF9 413 aa4.1□□□□□ -1.75
RNF4-211ENST00000509206 OXR1Q8N573 874 aa4.1□□□□□ -1.75
RNF4-211ENST00000509206 MAPK15Q8TD08 544 aa4.1□□□□□ -1.75
RNF4-211ENST00000509206 SAP25Q8TEE9 199 aa4.1□□□□□ -1.75
RNF4-211ENST00000509206 SSC4DQ8WTU2 575 aa4.1□□□□□ -1.75
RNF4-211ENST00000509206 BSNDQ8WZ55 320 aa4.1□□□□□ -1.75
RNF4-211ENST00000509206 KIFAP3Q92845 792 aa4.1□□□□□ -1.75
RNF4-211ENST00000509206 OTUB2Q96DC9 234 aa4.1□□□□□ -1.75
RNF4-211ENST00000509206 BICD1Q96G01 975 aa4.1□□□□□ -1.75
RNF4-211ENST00000509206 TRMT2BQ96GJ1 504 aaKnown RBP4.1□□□□□ -1.75
RNF4-211ENST00000509206 HSH2DQ96JZ2 352 aa4.1□□□□□ -1.75
RNF4-211ENST00000509206 MYRFLQ96LU7 910 aa4.1□□□□□ -1.75
RNF4-211ENST00000509206 TCEANC2Q96MN5 208 aa4.1□□□□□ -1.75
RNF4-211ENST00000509206 SLC46A1Q96NT5 459 aa4.1□□□□□ -1.75
RNF4-211ENST00000509206 HSD17B14Q9BPX1 270 aa4.1□□□□□ -1.75
RNF4-211ENST00000509206 PYM1Q9BRP8 204 aaKnown RBP4.1□□□□□ -1.75
RNF4-211ENST00000509206 CCDC113Q9H0I3 377 aa4.1□□□□□ -1.75
RNF4-211ENST00000509206 IL25Q9H293 177 aa4.1□□□□□ -1.75
RNF4-211ENST00000509206 ZNF768Q9H5H4 540 aaKnown RBP4.1□□□□□ -1.75
RNF4-211ENST00000509206 C6orf106Q9H6K1 298 aaPredicted RBP4.1□□□□□ -1.75
RNF4-211ENST00000509206 POLD4Q9HCU8 107 aa4.1□□□□□ -1.75
RNF4-211ENST00000509206 NEUROD4Q9HD90 331 aa4.1□□□□□ -1.75
RNF4-211ENST00000509206 KCNMB3Q9NPA1 279 aa4.1□□□□□ -1.75
RNF4-211ENST00000509206 SH3GLB2Q9NR46 395 aa4.1□□□□□ -1.75
RNF4-211ENST00000509206 SPHK2Q9NRA0 654 aa4.1□□□□□ -1.75
RNF4-211ENST00000509206 GEMIN8Q9NWZ8 242 aaKnown RBP4.1□□□□□ -1.75
RNF4-211ENST00000509206 USP36Q9P275 1121 aaKnown RBP4.1□□□□□ -1.75
RNF4-211ENST00000509206 WDR35Q9P2L0 1181 aa4.1□□□□□ -1.75
RNF4-211ENST00000509206 ORC3Q9UBD5 711 aaPredicted RBP4.1□□□□□ -1.75
RNF4-211ENST00000509206 ANAPC2Q9UJX6 822 aa4.1□□□□□ -1.75
RNF4-211ENST00000509206 VPS4AQ9UN37 437 aa4.1□□□□□ -1.75
RNF4-211ENST00000509206 SATB2Q9UPW6 733 aa4.1□□□□□ -1.75
RNF4-211ENST00000509206 NCKAP1Q9Y2A7 1128 aa4.1□□□□□ -1.75
RNF4-211ENST00000509206 ZBTB32Q9Y2Y4 487 aaPredicted RBP4.1□□□□□ -1.75
RNF4-211ENST00000509206 STON1Q9Y6Q2 735 aa4.1□□□□□ -1.75
RNF4-211ENST00000509206 PTPRDP23468 1912 aa4.09□□□□□ -1.75
RNF4-211ENST00000509206 FBN2P35556 2912 aa4.09□□□□□ -1.75
RNF4-211ENST00000509206 MYO18AQ92614 2054 aaKnown RBP4.09□□□□□ -1.75
RNF4-211ENST00000509206 A0A1B0GTH6 734 aa4.09□□□□□ -1.75
RNF4-211ENST00000509206 A0A1B0GTL3 188 aa4.09□□□□□ -1.75
RNF4-211ENST00000509206 CLEC18AA5D8T8 446 aa4.09□□□□□ -1.75
RNF4-211ENST00000509206 FIGNL2A6NMB9 653 aa4.09□□□□□ -1.75
RNF4-211ENST00000509206 TTLL8A6PVC2 850 aa4.09□□□□□ -1.75
RNF4-211ENST00000509206 LACTBL1A8MY62 500 aa4.09□□□□□ -1.75
RNF4-211ENST00000509206 CPLX1O14810 134 aa4.09□□□□□ -1.75
RNF4-211ENST00000509206 SLC27A2O14975 620 aa4.09□□□□□ -1.75
RNF4-211ENST00000509206 NPC1O15118 1278 aa4.09□□□□□ -1.75
RNF4-211ENST00000509206 TRIM24O15164 1050 aa4.09□□□□□ -1.75
RNF4-211ENST00000509206 VILLO15195 856 aa4.09□□□□□ -1.75
RNF4-211ENST00000509206 HOXC11O43248 304 aaPredicted RBP4.09□□□□□ -1.75
RNF4-211ENST00000509206 EFSO43281 561 aa4.09□□□□□ -1.75
RNF4-211ENST00000509206 OPA1O60313 960 aa4.09□□□□□ -1.75
RNF4-211ENST00000509206 TADA3O75528 432 aa4.09□□□□□ -1.75
RNF4-211ENST00000509206 TNFSF15O95150 251 aa4.09□□□□□ -1.75
RNF4-211ENST00000509206 SEMA4FO95754 770 aa4.09□□□□□ -1.75
RNF4-211ENST00000509206 DNTTP04053 509 aa4.09□□□□□ -1.75
RNF4-211ENST00000509206 CYP11A1P05108 521 aa4.09□□□□□ -1.75
RNF4-211ENST00000509206 EDN1P05305 212 aa4.09□□□□□ -1.75
RNF4-211ENST00000509206 EPHX1P07099 455 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms