RNA–Protein interactions for RNA: ENST00000509102.5

UBE3D-207, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,246 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-207ENST00000509102 GPD2P43304 727 aa19.46■□□□□ 0.71
UBE3D-207ENST00000509102 SLC11A2P49281 568 aa19.46■□□□□ 0.71
UBE3D-207ENST00000509102 SNX16P57768 344 aa19.46■□□□□ 0.71
UBE3D-207ENST00000509102 CSRP2Q16527 193 aa19.46■□□□□ 0.71
UBE3D-207ENST00000509102 MSANTD2Q6P1R3 559 aa19.46■□□□□ 0.71
UBE3D-207ENST00000509102 GJB7Q6PEY0 223 aa19.46■□□□□ 0.71
UBE3D-207ENST00000509102 TMEM92Q6UXU6 159 aa19.46■□□□□ 0.71
UBE3D-207ENST00000509102 MDGA1Q8NFP4 955 aa19.46■□□□□ 0.71
UBE3D-207ENST00000509102 SLC2A11Q9BYW1 496 aa19.46■□□□□ 0.71
UBE3D-207ENST00000509102 SEMA4GQ9NTN9 838 aa19.46■□□□□ 0.71
UBE3D-207ENST00000509102 CDV3Q9UKY7 258 aaKnown RBP19.46■□□□□ 0.71
UBE3D-207ENST00000509102 SLC27A6Q9Y2P4 619 aa19.46■□□□□ 0.71
UBE3D-207ENST00000509102 CEP83Q9Y592 693 aa19.46■□□□□ 0.71
UBE3D-207ENST00000509102 PCDHGA5Q9Y5G8 931 aa19.46■□□□□ 0.71
UBE3D-207ENST00000509102 TCRBV21S2A2A0A5A6 115 aa19.45■□□□□ 0.7
UBE3D-207ENST00000509102 KCNJ18B7U540 433 aa19.45■□□□□ 0.7
UBE3D-207ENST00000509102 NPC1O15118 1278 aa19.45■□□□□ 0.7
UBE3D-207ENST00000509102 TRIM24O15164 1050 aa19.45■□□□□ 0.7
UBE3D-207ENST00000509102 EEF1GP26641 437 aaKnown RBP19.45■□□□□ 0.7
UBE3D-207ENST00000509102 KCNJ12Q14500 433 aa19.45■□□□□ 0.7
UBE3D-207ENST00000509102 PUM1Q14671 1186 aaKnown RBP eCLIP19.45■□□□□ 0.7
UBE3D-207ENST00000509102 HSP90AA4PQ58FG1 418 aa19.45■□□□□ 0.7
UBE3D-207ENST00000509102 ADGRF1Q5T601 910 aa19.45■□□□□ 0.7
UBE3D-207ENST00000509102 FYB2Q5VWT5 728 aa19.45■□□□□ 0.7
UBE3D-207ENST00000509102 DENND1BQ6P3S1 775 aa19.45■□□□□ 0.7
UBE3D-207ENST00000509102 SASS6Q6UVJ0 657 aa19.45■□□□□ 0.7
UBE3D-207ENST00000509102 TOGARAM2Q6ZUX3 1019 aa19.45■□□□□ 0.7
UBE3D-207ENST00000509102 SCUBE3Q8IX30 993 aa19.45■□□□□ 0.7
UBE3D-207ENST00000509102 HMGB4Q8WW32 186 aa19.45■□□□□ 0.7
UBE3D-207ENST00000509102 SHC3Q92529 594 aa19.45■□□□□ 0.7
UBE3D-207ENST00000509102 SERPINB11Q96P15 392 aa19.45■□□□□ 0.7
UBE3D-207ENST00000509102 DDX50Q9BQ39 737 aaKnown RBP19.45■□□□□ 0.7
UBE3D-207ENST00000509102 ZDHHC4Q9NPG8 344 aa19.45■□□□□ 0.7
UBE3D-207ENST00000509102 DNAJC12Q9UKB3 198 aa19.45■□□□□ 0.7
UBE3D-207ENST00000509102 TYW5A2RUC4 315 aaKnown RBP19.44■□□□□ 0.7
UBE3D-207ENST00000509102 MSI1O43347 362 aaKnown RBP19.44■□□□□ 0.7
UBE3D-207ENST00000509102 ADAM23O75077 832 aa19.44■□□□□ 0.7
UBE3D-207ENST00000509102 EPN2O95208 641 aa19.44■□□□□ 0.7
UBE3D-207ENST00000509102 MBD3O95983 291 aa19.44■□□□□ 0.7
UBE3D-207ENST00000509102 KRT9P35527 623 aa19.44■□□□□ 0.7
UBE3D-207ENST00000509102 TBX4P57082 545 aa19.44■□□□□ 0.7
UBE3D-207ENST00000509102 BPIFB4P59827 614 aa19.44■□□□□ 0.7
UBE3D-207ENST00000509102 ARID5AQ03989 594 aa19.44■□□□□ 0.7
UBE3D-207ENST00000509102 RING1Q06587 406 aa19.44■□□□□ 0.7
UBE3D-207ENST00000509102 PLK5Q496M5 336 aa19.44■□□□□ 0.7
UBE3D-207ENST00000509102 EGFLAMQ63HQ2 1017 aa19.44■□□□□ 0.7
UBE3D-207ENST00000509102 ERMP1Q7Z2K6 904 aa19.44■□□□□ 0.7
UBE3D-207ENST00000509102 ANKS1BQ7Z6G8 1248 aa19.44■□□□□ 0.7
UBE3D-207ENST00000509102 FAM217AQ8IXS0 508 aa19.44■□□□□ 0.7
UBE3D-207ENST00000509102 C12orf50Q8NA57 414 aaPredicted RBP19.44■□□□□ 0.7
UBE3D-207ENST00000509102 CLEC4CQ8WTT0 213 aa19.44■□□□□ 0.7
UBE3D-207ENST00000509102 RMDN1Q96DB5 314 aa19.44■□□□□ 0.7
UBE3D-207ENST00000509102 ARRDC1-AS1Q9H2J1 176 aa19.44■□□□□ 0.7
UBE3D-207ENST00000509102 FBXO10Q9UK96 956 aa19.44■□□□□ 0.7
UBE3D-207ENST00000509102 NFE2L3Q9Y4A8 694 aa19.44■□□□□ 0.7
UBE3D-207ENST00000509102 ANTXRLA6NF34 631 aa19.43■□□□□ 0.7
UBE3D-207ENST00000509102 PRRT4C9JH25 899 aa19.43■□□□□ 0.7
UBE3D-207ENST00000509102 GFRA2O00451 464 aa19.43■□□□□ 0.7
UBE3D-207ENST00000509102 MAP3K13O43283 966 aa19.43■□□□□ 0.7
UBE3D-207ENST00000509102 CISD3P0C7P0 127 aa19.43■□□□□ 0.7
UBE3D-207ENST00000509102 RPL34P49207 117 aaKnown RBP19.43■□□□□ 0.7
UBE3D-207ENST00000509102 FOXK2Q01167 660 aa19.43■□□□□ 0.7
UBE3D-207ENST00000509102 PDCLQ13371 301 aa19.43■□□□□ 0.7
UBE3D-207ENST00000509102 STARD3Q14849 445 aa19.43■□□□□ 0.7
UBE3D-207ENST00000509102 EIF4HQ15056 248 aaKnown RBP19.43■□□□□ 0.7
UBE3D-207ENST00000509102 RSPO4Q2I0M5 234 aaPredicted RBP19.43■□□□□ 0.7
UBE3D-207ENST00000509102 TCP11X2Q5H9J9 407 aa19.43■□□□□ 0.7
UBE3D-207ENST00000509102 PRR23CQ6ZRP0 262 aa19.43■□□□□ 0.7
UBE3D-207ENST00000509102 BEND5Q7L4P6 421 aa19.43■□□□□ 0.7
UBE3D-207ENST00000509102 ZNF557Q8N988 423 aaPredicted RBP19.43■□□□□ 0.7
UBE3D-207ENST00000509102 ANKRD20A12PQ8NF67 263 aa19.43■□□□□ 0.7
UBE3D-207ENST00000509102 ENOX1Q8TC92 643 aaKnown RBP19.43■□□□□ 0.7
UBE3D-207ENST00000509102 TMA16Q96EY4 203 aaKnown RBP19.43■□□□□ 0.7
UBE3D-207ENST00000509102 SLC4A5Q9BY07 1137 aa19.43■□□□□ 0.7
UBE3D-207ENST00000509102 IRX2Q9BZI1 471 aaPredicted RBP19.43■□□□□ 0.7
UBE3D-207ENST00000509102 PDCL3Q9H2J4 239 aa19.43■□□□□ 0.7
UBE3D-207ENST00000509102 PARD6AQ9NPB6 346 aa19.43■□□□□ 0.7
UBE3D-207ENST00000509102 STOML2Q9UJZ1 356 aa19.43■□□□□ 0.7
UBE3D-207ENST00000509102 BECN2A8MW95 431 aa19.42■□□□□ 0.7
UBE3D-207ENST00000509102 E5RJQ4 531 aa19.42■□□□□ 0.7
UBE3D-207ENST00000509102 DCLK1O15075 740 aa19.42■□□□□ 0.7
UBE3D-207ENST00000509102 IRAK2O43187 625 aa19.42■□□□□ 0.7
UBE3D-207ENST00000509102 GABBR2O75899 941 aa19.42■□□□□ 0.7
UBE3D-207ENST00000509102 HNRNPLP14866 589 aaKnown RBP eCLIP19.42■□□□□ 0.7
UBE3D-207ENST00000509102 TGM1P22735 817 aa19.42■□□□□ 0.7
UBE3D-207ENST00000509102 WASP42768 502 aa19.42■□□□□ 0.7
UBE3D-207ENST00000509102 APBA1Q02410 837 aa19.42■□□□□ 0.7
UBE3D-207ENST00000509102 NNTQ13423 1086 aa19.42■□□□□ 0.7
UBE3D-207ENST00000509102 RAPGEF1Q13905 1077 aa19.42■□□□□ 0.7
UBE3D-207ENST00000509102 AASDHQ4L235 1098 aaPredicted RBP19.42■□□□□ 0.7
UBE3D-207ENST00000509102 DGLUCYQ7Z3D6 616 aa19.42■□□□□ 0.7
UBE3D-207ENST00000509102 TMEM110Q86TL2 294 aa19.42■□□□□ 0.7
UBE3D-207ENST00000509102 CCDC117Q8IWD4 279 aaPredicted RBP19.42■□□□□ 0.7
UBE3D-207ENST00000509102 DUSP15Q9H1R2 295 aaPredicted RBP19.42■□□□□ 0.7
UBE3D-207ENST00000509102 SYNCQ9H7C4 482 aa19.42■□□□□ 0.7
UBE3D-207ENST00000509102 POPDC2Q9HBU9 364 aa19.42■□□□□ 0.7
UBE3D-207ENST00000509102 SAMSN1Q9NSI8 373 aaKnown RBP19.42■□□□□ 0.7
UBE3D-207ENST00000509102 ANO10Q9NW15 660 aa19.42■□□□□ 0.7
UBE3D-207ENST00000509102 PCDHGC3Q9UN70 934 aa19.42■□□□□ 0.7
UBE3D-207ENST00000509102 INVSQ9Y283 1065 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms