RNA–Protein interactions for RNA: ENST00000508952.5

PACRGL-220, Transcript of parkin coregulated like, humanhuman

TSL 1 (best)

Gene PACRGL, Length 987 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACRGL-220ENST00000508952 MBD1Q9UIS9 605 aaPredicted RBP23.08■■□□□ 1.29
PACRGL-220ENST00000508952 RWDD2AQ9UIY3 292 aa23.08■■□□□ 1.29
PACRGL-220ENST00000508952 MSI1O43347 362 aaKnown RBP23.07■■□□□ 1.28
PACRGL-220ENST00000508952 FGFR1OPO95684 399 aaKnown RBP23.07■■□□□ 1.28
PACRGL-220ENST00000508952 DHPSP49366 369 aaPredicted RBP23.07■■□□□ 1.28
PACRGL-220ENST00000508952 MFAP3P55082 362 aa23.07■■□□□ 1.28
PACRGL-220ENST00000508952 STILQ15468 1287 aa23.07■■□□□ 1.28
PACRGL-220ENST00000508952 TRIP4Q15650 581 aaPredicted RBP23.07■■□□□ 1.28
PACRGL-220ENST00000508952 MAP7D1Q3KQU3 841 aa23.07■■□□□ 1.28
PACRGL-220ENST00000508952 KIAA1211LQ6NV74 962 aa23.07■■□□□ 1.28
PACRGL-220ENST00000508952 CREBRFQ8IUR6 639 aa23.07■■□□□ 1.28
PACRGL-220ENST00000508952 SCML4Q8N228 414 aa23.07■■□□□ 1.28
PACRGL-220ENST00000508952 CLEC4CQ8WTT0 213 aa23.07■■□□□ 1.28
PACRGL-220ENST00000508952 ABCC13Q9NSE7 274 aa23.07■■□□□ 1.28
PACRGL-220ENST00000508952 CACNA2D2Q9NY47 1150 aa23.07■■□□□ 1.28
PACRGL-220ENST00000508952 CLEC4EQ9ULY5 219 aa23.07■■□□□ 1.28
PACRGL-220ENST00000508952 HBS1LQ9Y450 684 aaKnown RBP23.07■■□□□ 1.28
PACRGL-220ENST00000508952 RAD54BQ9Y620 910 aa23.07■■□□□ 1.28
PACRGL-220ENST00000508952 TNRC6BQ9UPQ9 1833 aaKnown RBP23.07■■□□□ 1.28
PACRGL-220ENST00000508952 MAP3K13O43283 966 aa23.06■■□□□ 1.28
PACRGL-220ENST00000508952 KRT5P13647 590 aa23.06■■□□□ 1.28
PACRGL-220ENST00000508952 GEN1Q17RS7 908 aa23.06■■□□□ 1.28
PACRGL-220ENST00000508952 SDE2Q6IQ49 451 aa23.06■■□□□ 1.28
PACRGL-220ENST00000508952 CYP2U1Q7Z449 544 aa23.06■■□□□ 1.28
PACRGL-220ENST00000508952 FAM217AQ8IXS0 508 aa23.06■■□□□ 1.28
PACRGL-220ENST00000508952 CPXM2Q8N436 756 aa23.06■■□□□ 1.28
PACRGL-220ENST00000508952 GABRG3Q99928 467 aa23.06■■□□□ 1.28
PACRGL-220ENST00000508952 CRACR2AQ9BSW2 395 aa23.06■■□□□ 1.28
PACRGL-220ENST00000508952 CD248Q9HCU0 757 aa23.06■■□□□ 1.28
PACRGL-220ENST00000508952 UBE2TQ9NPD8 197 aaPredicted RBP23.06■■□□□ 1.28
PACRGL-220ENST00000508952 SLC27A6Q9Y2P4 619 aa23.06■■□□□ 1.28
PACRGL-220ENST00000508952 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa23.05■■□□□ 1.28
PACRGL-220ENST00000508952 WASH3PC4AMC7 463 aa23.05■■□□□ 1.28
PACRGL-220ENST00000508952 TSPAN3O60637 253 aa23.05■■□□□ 1.28
PACRGL-220ENST00000508952 CYBBP04839 570 aa23.05■■□□□ 1.28
PACRGL-220ENST00000508952 HARS2P49590 506 aaKnown RBP23.05■■□□□ 1.28
PACRGL-220ENST00000508952 ARMCX6Q7L4S7 300 aa23.05■■□□□ 1.28
PACRGL-220ENST00000508952 TMEFF1Q8IYR6 380 aa23.05■■□□□ 1.28
PACRGL-220ENST00000508952 IPO4Q8TEX9 1081 aaKnown RBP23.05■■□□□ 1.28
PACRGL-220ENST00000508952 DDI1Q8WTU0 396 aa23.05■■□□□ 1.28
PACRGL-220ENST00000508952 CALCOCO1Q9P1Z2 691 aa23.05■■□□□ 1.28
PACRGL-220ENST00000508952 CNTN6Q9UQ52 1028 aa23.05■■□□□ 1.28
PACRGL-220ENST00000508952 CEP192Q8TEP8 1941 aa23.05■■□□□ 1.28
PACRGL-220ENST00000508952 NDUFV2P19404 249 aa23.04■■□□□ 1.28
PACRGL-220ENST00000508952 LIMK1P53667 647 aa23.04■■□□□ 1.28
PACRGL-220ENST00000508952 APBA1Q02410 837 aa23.04■■□□□ 1.28
PACRGL-220ENST00000508952 STPG1Q5TH74 334 aa23.04■■□□□ 1.28
PACRGL-220ENST00000508952 MSANTD2Q6P1R3 559 aa23.04■■□□□ 1.28
PACRGL-220ENST00000508952 GJB7Q6PEY0 223 aa23.04■■□□□ 1.28
PACRGL-220ENST00000508952 LPCAT2Q7L5N7 544 aa23.04■■□□□ 1.28
PACRGL-220ENST00000508952 IRGQQ8WZA9 623 aa23.04■■□□□ 1.28
PACRGL-220ENST00000508952 PIWIL1Q96J94 861 aaKnown RBP23.04■■□□□ 1.28
PACRGL-220ENST00000508952 MIS12Q9H081 205 aa23.04■■□□□ 1.28
PACRGL-220ENST00000508952 SLC6A17Q9H1V8 727 aa23.04■■□□□ 1.28
PACRGL-220ENST00000508952 PATE3B3GLJ2 98 aa23.03■■□□□ 1.28
PACRGL-220ENST00000508952 LTFP02788 710 aa23.03■■□□□ 1.28
PACRGL-220ENST00000508952 SLC9A1P19634 815 aa23.03■■□□□ 1.28
PACRGL-220ENST00000508952 PTGER3P43115 390 aa23.03■■□□□ 1.28
PACRGL-220ENST00000508952 BYSLQ13895 437 aaKnown RBP23.03■■□□□ 1.28
PACRGL-220ENST00000508952 PPM1JQ5JR12 505 aa23.03■■□□□ 1.28
PACRGL-220ENST00000508952 IL31Q6EBC2 164 aa23.03■■□□□ 1.28
PACRGL-220ENST00000508952 DENND1BQ6P3S1 775 aa23.03■■□□□ 1.28
PACRGL-220ENST00000508952 TRIM65Q6PJ69 517 aa23.03■■□□□ 1.28
PACRGL-220ENST00000508952 ANKS1BQ7Z6G8 1248 aa23.03■■□□□ 1.28
PACRGL-220ENST00000508952 IRF2BP1Q8IU81 584 aa23.03■■□□□ 1.28
PACRGL-220ENST00000508952 PIGKQ92643 395 aa23.03■■□□□ 1.28
PACRGL-220ENST00000508952 HSFY1Q96LI6 401 aa23.03■■□□□ 1.28
PACRGL-220ENST00000508952 EDEM2Q9BV94 578 aa23.03■■□□□ 1.28
PACRGL-220ENST00000508952 ACP6Q9NPH0 428 aa23.03■■□□□ 1.28
PACRGL-220ENST00000508952 KCNA4P22459 653 aa23.02■■□□□ 1.28
PACRGL-220ENST00000508952 HOXD9P28356 352 aaPredicted RBP23.02■■□□□ 1.28
PACRGL-220ENST00000508952 GPD2P43304 727 aa23.02■■□□□ 1.28
PACRGL-220ENST00000508952 GOLGA1Q92805 767 aa23.02■■□□□ 1.28
PACRGL-220ENST00000508952 CLSTN2Q9H4D0 955 aa23.02■■□□□ 1.28
PACRGL-220ENST00000508952 ST7Q9NRC1 585 aa23.02■■□□□ 1.28
PACRGL-220ENST00000508952 STON1Q9Y6Q2 735 aa23.02■■□□□ 1.28
PACRGL-220ENST00000508952 CNOT1A5YKK6 2376 aaKnown RBP23.02■■□□□ 1.28
PACRGL-220ENST00000508952 GON4LQ3T8J9 2241 aa23.02■■□□□ 1.28
PACRGL-220ENST00000508952 LNP1A1A4G5 178 aa23.01■■□□□ 1.27
PACRGL-220ENST00000508952 GFRA2O00451 464 aa23.01■■□□□ 1.27
PACRGL-220ENST00000508952 ZBTB24O43167 697 aaPredicted RBP23.01■■□□□ 1.27
PACRGL-220ENST00000508952 FBXO21O94952 628 aa23.01■■□□□ 1.27
PACRGL-220ENST00000508952 LETM1O95202 739 aaPredicted RBP23.01■■□□□ 1.27
PACRGL-220ENST00000508952 IL12RB1P42701 662 aa23.01■■□□□ 1.27
PACRGL-220ENST00000508952 ARHGAP44Q17R89 818 aa23.01■■□□□ 1.27
PACRGL-220ENST00000508952 MPPE1Q53F39 396 aa23.01■■□□□ 1.27
PACRGL-220ENST00000508952 ADGRF1Q5T601 910 aa23.01■■□□□ 1.27
PACRGL-220ENST00000508952 RNF43Q68DV7 783 aa23.01■■□□□ 1.27
PACRGL-220ENST00000508952 SCUBE3Q8IX30 993 aa23.01■■□□□ 1.27
PACRGL-220ENST00000508952 DEFB119Q8N690 84 aa23.01■■□□□ 1.27
PACRGL-220ENST00000508952 MLKLQ8NB16 471 aa23.01■■□□□ 1.27
PACRGL-220ENST00000508952 CD93Q9NPY3 652 aa23.01■■□□□ 1.27
PACRGL-220ENST00000508952 THAP10Q9P2Z0 257 aaPredicted RBP23.01■■□□□ 1.27
PACRGL-220ENST00000508952 STOML2Q9UJZ1 356 aa23.01■■□□□ 1.27
PACRGL-220ENST00000508952 CYP8B1Q9UNU6 501 aa23.01■■□□□ 1.27
PACRGL-220ENST00000508952 THAP12O43422 761 aa23■■□□□ 1.27
PACRGL-220ENST00000508952 IGLV3-27P01718 113 aa23■■□□□ 1.27
PACRGL-220ENST00000508952 SGSHP51688 502 aa23■■□□□ 1.27
PACRGL-220ENST00000508952 RPL6Q02878 288 aaKnown RBP23■■□□□ 1.27
PACRGL-220ENST00000508952 TMEM215Q68D42 235 aa23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms