RNA–Protein interactions for RNA: ENST00000508756.2

CHD1-205, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 724 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-205ENST00000508756 ZNF268Q14587 947 aaPredicted RBP8.14□□□□□ -1.11
CHD1-205ENST00000508756 KPNB1Q14974 876 aaKnown RBP8.14□□□□□ -1.11
CHD1-205ENST00000508756 SRSF7Q16629 238 aaKnown RBP eCLIP8.14□□□□□ -1.11
CHD1-205ENST00000508756 MIS18BP1Q6P0N0 1132 aa8.14□□□□□ -1.11
CHD1-205ENST00000508756 ZNF813Q6ZN06 617 aa8.14□□□□□ -1.11
CHD1-205ENST00000508756 GALNT16Q8N428 558 aa8.14□□□□□ -1.11
CHD1-205ENST00000508756 SEMA4CQ9C0C4 833 aa8.14□□□□□ -1.11
CHD1-205ENST00000508756 SEMA5BQ9P283 1151 aa8.14□□□□□ -1.11
CHD1-205ENST00000508756 PCSK5Q92824 1860 aa8.14□□□□□ -1.11
CHD1-205ENST00000508756 SMIM35A0A1B0GVV1 85 aa8.13□□□□□ -1.11
CHD1-205ENST00000508756 GOLGA6L3A6NEY3 463 aa8.13□□□□□ -1.11
CHD1-205ENST00000508756 LGALS16A8MUM7 142 aa8.13□□□□□ -1.11
CHD1-205ENST00000508756 NPC1O15118 1278 aa8.13□□□□□ -1.11
CHD1-205ENST00000508756 TNFRSF6BO95407 300 aa8.13□□□□□ -1.11
CHD1-205ENST00000508756 PRR35P0CG20 571 aa8.13□□□□□ -1.11
CHD1-205ENST00000508756 MMP8P22894 467 aa8.13□□□□□ -1.11
CHD1-205ENST00000508756 CSHL1Q14406 222 aa8.13□□□□□ -1.11
CHD1-205ENST00000508756 SPARCL1Q14515 664 aa8.13□□□□□ -1.11
CHD1-205ENST00000508756 ELF2Q15723 593 aa8.13□□□□□ -1.11
CHD1-205ENST00000508756 KIAA1614Q5VZ46 1190 aa8.13□□□□□ -1.11
CHD1-205ENST00000508756 SLC18B1Q6NT16 456 aa8.13□□□□□ -1.11
CHD1-205ENST00000508756 KRT27Q7Z3Y8 459 aa8.13□□□□□ -1.11
CHD1-205ENST00000508756 NEK8Q86SG6 692 aa8.13□□□□□ -1.11
CHD1-205ENST00000508756 TTC30AQ86WT1 665 aa8.13□□□□□ -1.11
CHD1-205ENST00000508756 ZNF398Q8TD17 642 aa8.13□□□□□ -1.11
CHD1-205ENST00000508756 MCRS1Q96EZ8 462 aa8.13□□□□□ -1.11
CHD1-205ENST00000508756 RXFP3Q9NSD7 469 aa8.13□□□□□ -1.11
CHD1-205ENST00000508756 SCAF8Q9UPN6 1271 aaKnown RBP8.13□□□□□ -1.11
CHD1-205ENST00000508756 C16orf96A6NNT2 1141 aa8.12□□□□□ -1.11
CHD1-205ENST00000508756 RNF8O76064 485 aa8.12□□□□□ -1.11
CHD1-205ENST00000508756 PDIA3P30101 505 aaKnown RBP8.12□□□□□ -1.11
CHD1-205ENST00000508756 ALDH18A1P54886 795 aaKnown RBP8.12□□□□□ -1.11
CHD1-205ENST00000508756 GAB1Q13480 694 aa8.12□□□□□ -1.11
CHD1-205ENST00000508756 MORC3Q14149 939 aa8.12□□□□□ -1.11
CHD1-205ENST00000508756 EZH2Q15910 746 aaKnown RBP8.12□□□□□ -1.11
CHD1-205ENST00000508756 PGBD2Q6P3X8 592 aa8.12□□□□□ -1.11
CHD1-205ENST00000508756 ACSM6Q6P461 480 aa8.12□□□□□ -1.11
CHD1-205ENST00000508756 C16orf89Q6UX73 402 aa8.12□□□□□ -1.11
CHD1-205ENST00000508756 OSR1Q8TAX0 266 aaPredicted RBP8.12□□□□□ -1.11
CHD1-205ENST00000508756 SLC22A17Q8WUG5 538 aa8.12□□□□□ -1.11
CHD1-205ENST00000508756 POF1BQ8WVV4 589 aa8.12□□□□□ -1.11
CHD1-205ENST00000508756 F5H423 210 aaPredicted RBP8.11□□□□□ -1.11
CHD1-205ENST00000508756 DNPH1O43598 174 aa8.11□□□□□ -1.11
CHD1-205ENST00000508756 CER1O95813 267 aa8.11□□□□□ -1.11
CHD1-205ENST00000508756 DUSP1P28562 367 aa8.11□□□□□ -1.11
CHD1-205ENST00000508756 GALNT1Q10472 559 aaPredicted RBP8.11□□□□□ -1.11
CHD1-205ENST00000508756 PUM3Q15397 648 aaKnown RBP8.11□□□□□ -1.11
CHD1-205ENST00000508756 CNGA3Q16281 694 aa8.11□□□□□ -1.11
CHD1-205ENST00000508756 SLC2A7Q6PXP3 512 aa8.11□□□□□ -1.11
CHD1-205ENST00000508756 GATAD2AQ86YP4 633 aa8.11□□□□□ -1.11
CHD1-205ENST00000508756 CNGA4Q8IV77 575 aa8.11□□□□□ -1.11
CHD1-205ENST00000508756 C16orf71Q8IYS4 520 aaPredicted RBP8.11□□□□□ -1.11
CHD1-205ENST00000508756 OR52L2PQ8NGH6 319 aa8.11□□□□□ -1.11
CHD1-205ENST00000508756 FAM71BQ8TC56 605 aa8.11□□□□□ -1.11
CHD1-205ENST00000508756 AKAP1Q92667 903 aaKnown RBP eCLIP8.11□□□□□ -1.11
CHD1-205ENST00000508756 MAP4K1Q92918 833 aa8.11□□□□□ -1.11
CHD1-205ENST00000508756 CDCP1Q9H5V8 836 aa8.11□□□□□ -1.11
CHD1-205ENST00000508756 FBXO28Q9NVF7 368 aa8.11□□□□□ -1.11
CHD1-205ENST00000508756 PCDHB7Q9Y5E2 793 aa8.11□□□□□ -1.11
CHD1-205ENST00000508756 SPATA31A1Q5TZJ5 1347 aa8.1□□□□□ -1.11
CHD1-205ENST00000508756 GXYLT2A0PJZ3 443 aa8.1□□□□□ -1.11
CHD1-205ENST00000508756 MATN1P21941 496 aa8.1□□□□□ -1.11
CHD1-205ENST00000508756 SFPQP23246 707 aaKnown RBP eCLIP8.1□□□□□ -1.11
CHD1-205ENST00000508756 KELP23276 732 aa8.1□□□□□ -1.11
CHD1-205ENST00000508756 AKT1P31749 480 aa8.1□□□□□ -1.11
CHD1-205ENST00000508756 YPEL5P62699 121 aa8.1□□□□□ -1.11
CHD1-205ENST00000508756 PFKFB3Q16875 520 aaPredicted RBP8.1□□□□□ -1.11
CHD1-205ENST00000508756 PFKFB4Q16877 469 aa8.1□□□□□ -1.11
CHD1-205ENST00000508756 MTX3Q5HYI7 312 aa8.1□□□□□ -1.11
CHD1-205ENST00000508756 ZNF626Q68DY1 528 aa8.1□□□□□ -1.11
CHD1-205ENST00000508756 RINT1Q6NUQ1 792 aa8.1□□□□□ -1.11
CHD1-205ENST00000508756 KYAT3Q6YP21 454 aaKnown RBP8.1□□□□□ -1.11
CHD1-205ENST00000508756 NPIPB3Q92617 1050 aa8.1□□□□□ -1.11
CHD1-205ENST00000508756 NUAK2Q9H093 628 aa8.1□□□□□ -1.11
CHD1-205ENST00000508756 DNAJC9-AS1A6NH13 148 aa8.09□□□□□ -1.11
CHD1-205ENST00000508756 PRYO14603 147 aa8.09□□□□□ -1.11
CHD1-205ENST00000508756 RRHO14718 337 aa8.09□□□□□ -1.11
CHD1-205ENST00000508756 SKAP2O75563 359 aaPredicted RBP8.09□□□□□ -1.11
CHD1-205ENST00000508756 RPP40O75818 363 aaKnown RBP8.09□□□□□ -1.11
CHD1-205ENST00000508756 NDUFS1P28331 727 aa8.09□□□□□ -1.11
CHD1-205ENST00000508756 VPS41P49754 854 aa8.09□□□□□ -1.11
CHD1-205ENST00000508756 CHAF1AQ13111 956 aaPredicted RBP8.09□□□□□ -1.11
CHD1-205ENST00000508756 PTK2BQ14289 1009 aa8.09□□□□□ -1.11
CHD1-205ENST00000508756 TRIM71Q2Q1W2 868 aaKnown RBP8.09□□□□□ -1.11
CHD1-205ENST00000508756 ZACNQ401N2 412 aa8.09□□□□□ -1.11
CHD1-205ENST00000508756 MEX3CQ5U5Q3 659 aaKnown RBP8.09□□□□□ -1.11
CHD1-205ENST00000508756 TFAP2DQ7Z6R9 452 aa8.09□□□□□ -1.11
CHD1-205ENST00000508756 ATG16L2Q8NAA4 619 aa8.09□□□□□ -1.11
CHD1-205ENST00000508756 OR1N1Q8NGS0 311 aa8.09□□□□□ -1.11
CHD1-205ENST00000508756 PAAF1Q9BRP4 392 aa8.09□□□□□ -1.11
CHD1-205ENST00000508756 ELOVL1Q9BW60 279 aa8.09□□□□□ -1.11
CHD1-205ENST00000508756 RNF26Q9BY78 433 aaPredicted RBP8.09□□□□□ -1.11
CHD1-205ENST00000508756 TP63Q9H3D4 680 aaPredicted RBP8.09□□□□□ -1.11
CHD1-205ENST00000508756 ARL8BQ9NVJ2 186 aa8.09□□□□□ -1.11
CHD1-205ENST00000508756 ASNSD1Q9NWL6 643 aa8.09□□□□□ -1.11
CHD1-205ENST00000508756 HEMK1Q9Y5R4 338 aaPredicted RBP8.09□□□□□ -1.11
CHD1-205ENST00000508756 KCNU1A8MYU2 1149 aa8.08□□□□□ -1.12
CHD1-205ENST00000508756 M0QYT0 321 aa8.08□□□□□ -1.12
CHD1-205ENST00000508756 DSCR3O14972 297 aa8.08□□□□□ -1.12
CHD1-205ENST00000508756 BCAR3O75815 825 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms