RNA–Protein interactions for RNA: ENST00000508740.5

NR1I3-226, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 977 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-226ENST00000508740 IFNB1P01574 187 aa8.26□□□□□ -1.09
NR1I3-226ENST00000508740 LTFP02788 710 aa8.26□□□□□ -1.09
NR1I3-226ENST00000508740 NUDT17P0C025 328 aa8.26□□□□□ -1.09
NR1I3-226ENST00000508740 GOLGA6DP0CG33 693 aa8.26□□□□□ -1.09
NR1I3-226ENST00000508740 RBP3P10745 1247 aa8.26□□□□□ -1.09
NR1I3-226ENST00000508740 NCAM1P13591 858 aa8.26□□□□□ -1.09
NR1I3-226ENST00000508740 CYP2F1P24903 491 aa8.26□□□□□ -1.09
NR1I3-226ENST00000508740 STIP1P31948 543 aaKnown RBP8.26□□□□□ -1.09
NR1I3-226ENST00000508740 CHKAP35790 457 aa8.26□□□□□ -1.09
NR1I3-226ENST00000508740 GATMP50440 423 aa8.26□□□□□ -1.09
NR1I3-226ENST00000508740 GYS2P54840 703 aa8.26□□□□□ -1.09
NR1I3-226ENST00000508740 CCL23P55773 120 aa8.26□□□□□ -1.09
NR1I3-226ENST00000508740 EIF3BP55884 814 aaKnown RBP8.26□□□□□ -1.09
NR1I3-226ENST00000508740 BCAR1P56945 870 aa8.26□□□□□ -1.09
NR1I3-226ENST00000508740 PITX1P78337 314 aaPredicted RBP8.26□□□□□ -1.09
NR1I3-226ENST00000508740 ROR1Q01973 937 aa8.26□□□□□ -1.09
NR1I3-226ENST00000508740 TLE2Q04725 743 aa8.26□□□□□ -1.09
NR1I3-226ENST00000508740 DEUP1Q05D60 604 aa8.26□□□□□ -1.09
NR1I3-226ENST00000508740 ZNF844Q08AG5 666 aa8.26□□□□□ -1.09
NR1I3-226ENST00000508740 GPS1Q13098 491 aa8.26□□□□□ -1.09
NR1I3-226ENST00000508740 MRPL58Q14197 206 aaKnown RBP8.26□□□□□ -1.09
NR1I3-226ENST00000508740 MORF4L2Q15014 288 aa8.26□□□□□ -1.09
NR1I3-226ENST00000508740 P3H1Q32P28 736 aa8.26□□□□□ -1.09
NR1I3-226ENST00000508740 TTMPQ5BVD1 217 aa8.26□□□□□ -1.09
NR1I3-226ENST00000508740 PPP6R3Q5H9R7 873 aaPredicted RBP8.26□□□□□ -1.09
NR1I3-226ENST00000508740 FAM171A1Q5VUB5 890 aa8.26□□□□□ -1.09
NR1I3-226ENST00000508740 DENND2CQ68D51 928 aa8.26□□□□□ -1.09
NR1I3-226ENST00000508740 DARS2Q6PI48 645 aaKnown RBP8.26□□□□□ -1.09
NR1I3-226ENST00000508740 C1orf228Q6PIY5 440 aa8.26□□□□□ -1.09
NR1I3-226ENST00000508740 CEP128Q6ZU80 1094 aa8.26□□□□□ -1.09
NR1I3-226ENST00000508740 TRMT10CQ7L0Y3 403 aaKnown RBP8.26□□□□□ -1.09
NR1I3-226ENST00000508740 BEND5Q7L4P6 421 aa8.26□□□□□ -1.09
NR1I3-226ENST00000508740 BHLHA9Q7RTU4 235 aa8.26□□□□□ -1.09
NR1I3-226ENST00000508740 PCGF5Q86SE9 256 aa8.26□□□□□ -1.09
NR1I3-226ENST00000508740 FAM131BQ86XD5 332 aa8.26□□□□□ -1.09
NR1I3-226ENST00000508740 NPAS4Q8IUM7 802 aa8.26□□□□□ -1.09
NR1I3-226ENST00000508740 UNC45BQ8IWX7 931 aa8.26□□□□□ -1.09
NR1I3-226ENST00000508740 DCP1BQ8IZD4 617 aaKnown RBP8.26□□□□□ -1.09
NR1I3-226ENST00000508740 SCML4Q8N228 414 aa8.26□□□□□ -1.09
NR1I3-226ENST00000508740 ZCCHC9Q8N567 271 aaKnown RBP8.26□□□□□ -1.09
NR1I3-226ENST00000508740 OR2W6PQ8NHA6 318 aa8.26□□□□□ -1.09
NR1I3-226ENST00000508740 SLC7A14Q8TBB6 771 aa8.26□□□□□ -1.09
NR1I3-226ENST00000508740 P3H4Q92791 437 aa8.26□□□□□ -1.09
NR1I3-226ENST00000508740 WNT2BQ93097 391 aa8.26□□□□□ -1.09
NR1I3-226ENST00000508740 PGAP3Q96FM1 320 aaPredicted RBP8.26□□□□□ -1.09
NR1I3-226ENST00000508740 SCLYQ96I15 445 aa8.26□□□□□ -1.09
NR1I3-226ENST00000508740 PKNOX2Q96KN3 472 aa8.26□□□□□ -1.09
NR1I3-226ENST00000508740 GUCD1Q96NT3 240 aa8.26□□□□□ -1.09
NR1I3-226ENST00000508740 SLC9A7Q96T83 725 aa8.26□□□□□ -1.09
NR1I3-226ENST00000508740 MAGEB5Q9BZ81 275 aa8.26□□□□□ -1.09
NR1I3-226ENST00000508740 SEMA4AQ9H3S1 761 aa8.26□□□□□ -1.09
NR1I3-226ENST00000508740 HIPK3Q9H422 1215 aa8.26□□□□□ -1.09
NR1I3-226ENST00000508740 C10orf88Q9H8K7 445 aa8.26□□□□□ -1.09
NR1I3-226ENST00000508740 FAM204AQ9H8W3 233 aa8.26□□□□□ -1.09
NR1I3-226ENST00000508740 PRDM16Q9HAZ2 1276 aa8.26□□□□□ -1.09
NR1I3-226ENST00000508740 GOLGA6AQ9NYA3 693 aa8.26□□□□□ -1.09
NR1I3-226ENST00000508740 RCOR3Q9P2K3 495 aaPredicted RBP8.26□□□□□ -1.09
NR1I3-226ENST00000508740 ADAM21Q9UKJ8 722 aa8.26□□□□□ -1.09
NR1I3-226ENST00000508740 ADAM28Q9UKQ2 775 aa8.26□□□□□ -1.09
NR1I3-226ENST00000508740 FZD10Q9ULW2 581 aa8.26□□□□□ -1.09
NR1I3-226ENST00000508740 USP3Q9Y6I4 520 aa8.26□□□□□ -1.09
NR1I3-226ENST00000508740 SYNJ2BP-COX16A0A087WUM0 186 aa8.25□□□□□ -1.09
NR1I3-226ENST00000508740 BCLAF3A2AJT9 711 aaKnown RBP8.25□□□□□ -1.09
NR1I3-226ENST00000508740 GOLGA6L10A6NI86 522 aa8.25□□□□□ -1.09
NR1I3-226ENST00000508740 H7C0C1 242 aa8.25□□□□□ -1.09
NR1I3-226ENST00000508740 RIPK2O43353 540 aa8.25□□□□□ -1.09
NR1I3-226ENST00000508740 F9P00740 461 aa8.25□□□□□ -1.09
NR1I3-226ENST00000508740 GALTP07902 379 aa8.25□□□□□ -1.09
NR1I3-226ENST00000508740 OR4Q2P0C623 313 aa8.25□□□□□ -1.09
NR1I3-226ENST00000508740 MYZAPP0CAP1 466 aa8.25□□□□□ -1.09
NR1I3-226ENST00000508740 CYP2C18P33260 490 aa8.25□□□□□ -1.09
NR1I3-226ENST00000508740 RPL22P35268 128 aaKnown RBP8.25□□□□□ -1.09
NR1I3-226ENST00000508740 ADRA1BP35368 520 aa8.25□□□□□ -1.09
NR1I3-226ENST00000508740 GRIK1P39086 918 aa8.25□□□□□ -1.09
NR1I3-226ENST00000508740 ATP5OP48047 213 aa8.25□□□□□ -1.09
NR1I3-226ENST00000508740 NR2C2P49116 596 aa8.25□□□□□ -1.09
NR1I3-226ENST00000508740 SLC11A1P49279 550 aa8.25□□□□□ -1.09
NR1I3-226ENST00000508740 AIF1P55008 147 aa8.25□□□□□ -1.09
NR1I3-226ENST00000508740 GDF10P55107 478 aa8.25□□□□□ -1.09
NR1I3-226ENST00000508740 USP46P62068 366 aa8.25□□□□□ -1.09
NR1I3-226ENST00000508740 SMAD3P84022 425 aaKnown RBP8.25□□□□□ -1.09
NR1I3-226ENST00000508740 IFFO1Q0D2I5 559 aa8.25□□□□□ -1.09
NR1I3-226ENST00000508740 NME3Q13232 169 aa8.25□□□□□ -1.09
NR1I3-226ENST00000508740 SLC29A2Q14542 456 aa8.25□□□□□ -1.09
NR1I3-226ENST00000508740 NFE2Q16621 373 aaPredicted RBP8.25□□□□□ -1.09
NR1I3-226ENST00000508740 PUS10Q3MIT2 529 aaKnown RBP8.25□□□□□ -1.09
NR1I3-226ENST00000508740 TRIM60Q495X7 471 aa8.25□□□□□ -1.09
NR1I3-226ENST00000508740 SLC39A12Q504Y0 691 aa8.25□□□□□ -1.09
NR1I3-226ENST00000508740 RNASEH2BQ5TBB1 312 aaKnown RBP8.25□□□□□ -1.09
NR1I3-226ENST00000508740 C1orf53Q5VUE5 145 aa8.25□□□□□ -1.09
NR1I3-226ENST00000508740 BSPRYQ5W0U4 402 aa8.25□□□□□ -1.09
NR1I3-226ENST00000508740 CCDC25Q86WR0 208 aa8.25□□□□□ -1.09
NR1I3-226ENST00000508740 RELL1Q8IUW5 271 aa8.25□□□□□ -1.09
NR1I3-226ENST00000508740 FAM71DQ8N9W8 422 aa8.25□□□□□ -1.09
NR1I3-226ENST00000508740 MAFAQ8NHW3 353 aaPredicted RBP8.25□□□□□ -1.09
NR1I3-226ENST00000508740 FAM76AQ8TAV0 307 aa8.25□□□□□ -1.09
NR1I3-226ENST00000508740 EXOC4Q96A65 974 aa8.25□□□□□ -1.09
NR1I3-226ENST00000508740 NTAN1Q96AB6 310 aa8.25□□□□□ -1.09
NR1I3-226ENST00000508740 FUBP3Q96I24 572 aaKnown RBP eCLIP8.25□□□□□ -1.09
NR1I3-226ENST00000508740 PWWP2AQ96N64 755 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms