RNA–Protein interactions for RNA: ENST00000508668.1

HMGN1P11-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 11, humanhuman

BASIC

Gene HMGN1P11, Length 303 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P11-201ENST00000508668 NXF3Q9H4D5 531 aaKnown RBP4.08□□□□□ -1.76
HMGN1P11-201ENST00000508668 C17orf75Q9HAS0 396 aa4.08□□□□□ -1.76
HMGN1P11-201ENST00000508668 ZFP14Q9HCL3 533 aa4.08□□□□□ -1.76
HMGN1P11-201ENST00000508668 ASAH2Q9NR71 780 aa4.08□□□□□ -1.76
HMGN1P11-201ENST00000508668 DDX19AQ9NUU7 478 aaKnown RBP4.08□□□□□ -1.76
HMGN1P11-201ENST00000508668 THG1LQ9NWX6 298 aaKnown RBP4.08□□□□□ -1.76
HMGN1P11-201ENST00000508668 GDE1Q9NZC3 331 aa4.08□□□□□ -1.76
HMGN1P11-201ENST00000508668 LARSQ9P2J5 1176 aaKnown RBP4.08□□□□□ -1.76
HMGN1P11-201ENST00000508668 EPS15L1Q9UBC2 864 aa4.08□□□□□ -1.76
HMGN1P11-201ENST00000508668 ZMYM2Q9UBW7 1377 aa4.08□□□□□ -1.76
HMGN1P11-201ENST00000508668 CDH7Q9ULB5 785 aa4.08□□□□□ -1.76
HMGN1P11-201ENST00000508668 TPCN1Q9ULQ1 816 aa4.08□□□□□ -1.76
HMGN1P11-201ENST00000508668 USP18Q9UMW8 372 aa4.08□□□□□ -1.76
HMGN1P11-201ENST00000508668 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.08□□□□□ -1.76
HMGN1P11-201ENST00000508668 CDY1Q9Y6F8 540 aa4.08□□□□□ -1.76
HMGN1P11-201ENST00000508668 NUMBLQ9Y6R0 609 aa4.08□□□□□ -1.76
HMGN1P11-201ENST00000508668 X6R8D5 127 aa4.08□□□□□ -1.76
HMGN1P11-201ENST00000508668 PIEZO1Q92508 2521 aa4.07□□□□□ -1.76
HMGN1P11-201ENST00000508668 BRWD1Q9NSI6 2320 aa4.07□□□□□ -1.76
HMGN1P11-201ENST00000508668 KANSL1LA0AUZ9 987 aa4.07□□□□□ -1.76
HMGN1P11-201ENST00000508668 PRR23AA6NEV1 266 aa4.07□□□□□ -1.76
HMGN1P11-201ENST00000508668 PODXLO00592 558 aa4.07□□□□□ -1.76
HMGN1P11-201ENST00000508668 ZNF263O14978 683 aa4.07□□□□□ -1.76
HMGN1P11-201ENST00000508668 HNRNPDLO14979 420 aaKnown RBP4.07□□□□□ -1.76
HMGN1P11-201ENST00000508668 SYN3O14994 580 aa4.07□□□□□ -1.76
HMGN1P11-201ENST00000508668 CLDN3O15551 220 aa4.07□□□□□ -1.76
HMGN1P11-201ENST00000508668 B4GALT5O43286 388 aa4.07□□□□□ -1.76
HMGN1P11-201ENST00000508668 FOXD2O60548 495 aaPredicted RBP4.07□□□□□ -1.76
HMGN1P11-201ENST00000508668 BMP15O95972 392 aa4.07□□□□□ -1.76
HMGN1P11-201ENST00000508668 PDGFBP01127 241 aaPredicted RBP4.07□□□□□ -1.76
HMGN1P11-201ENST00000508668 DCNP07585 359 aaKnown RBP4.07□□□□□ -1.76
HMGN1P11-201ENST00000508668 HSP90AA1P07900 732 aaKnown RBP4.07□□□□□ -1.76
HMGN1P11-201ENST00000508668 MCF2P10911 925 aa4.07□□□□□ -1.76
HMGN1P11-201ENST00000508668 MYL4P12829 197 aa4.07□□□□□ -1.76
HMGN1P11-201ENST00000508668 NAT1P18440 290 aa4.07□□□□□ -1.76
HMGN1P11-201ENST00000508668 PAX3P23760 479 aa4.07□□□□□ -1.76
HMGN1P11-201ENST00000508668 HOXA9P31269 272 aa4.07□□□□□ -1.76
HMGN1P11-201ENST00000508668 HOXA11P31270 313 aaPredicted RBP4.07□□□□□ -1.76
HMGN1P11-201ENST00000508668 NBL1P41271 181 aa4.07□□□□□ -1.76
HMGN1P11-201ENST00000508668 PEX3P56589 373 aa4.07□□□□□ -1.76
HMGN1P11-201ENST00000508668 CSTF1Q05048 431 aaKnown RBP4.07□□□□□ -1.76
HMGN1P11-201ENST00000508668 SPIRE1Q08AE8 756 aa4.07□□□□□ -1.76
HMGN1P11-201ENST00000508668 TCF15Q12870 199 aa4.07□□□□□ -1.76
HMGN1P11-201ENST00000508668 KCNC3Q14003 757 aa4.07□□□□□ -1.76
HMGN1P11-201ENST00000508668 PDIA5Q14554 519 aa4.07□□□□□ -1.76
HMGN1P11-201ENST00000508668 MLF2Q15773 248 aaPredicted RBP4.07□□□□□ -1.76
HMGN1P11-201ENST00000508668 FNDC3BQ53EP0 1204 aaKnown RBP4.07□□□□□ -1.76
HMGN1P11-201ENST00000508668 SLC44A4Q53GD3 710 aa4.07□□□□□ -1.76
HMGN1P11-201ENST00000508668 RILPL1Q5EBL4 403 aa4.07□□□□□ -1.76
HMGN1P11-201ENST00000508668 GLRA4Q5JXX5 417 aa4.07□□□□□ -1.76
HMGN1P11-201ENST00000508668 ZNF648Q5T619 568 aaPredicted RBP4.07□□□□□ -1.76
HMGN1P11-201ENST00000508668 STEAP3Q658P3 488 aa4.07□□□□□ -1.76
HMGN1P11-201ENST00000508668 CC2D1AQ6P1N0 951 aaPredicted RBP4.07□□□□□ -1.76
HMGN1P11-201ENST00000508668 PRSS55Q6UWB4 352 aaPredicted RBP4.07□□□□□ -1.76
HMGN1P11-201ENST00000508668 TPRG1Q6ZUI0 275 aa4.07□□□□□ -1.76
HMGN1P11-201ENST00000508668 SYDE1Q6ZW31 735 aaPredicted RBP4.07□□□□□ -1.76
HMGN1P11-201ENST00000508668 STXBP4Q6ZWJ1 553 aa4.07□□□□□ -1.76
HMGN1P11-201ENST00000508668 SKAP1Q86WV1 359 aa4.07□□□□□ -1.76
HMGN1P11-201ENST00000508668 TMEM173Q86WV6 379 aaPredicted RBP4.07□□□□□ -1.76
HMGN1P11-201ENST00000508668 CDR2LQ86X02 465 aaPredicted RBP4.07□□□□□ -1.76
HMGN1P11-201ENST00000508668 CATSPER3Q86XQ3 398 aa4.07□□□□□ -1.76
HMGN1P11-201ENST00000508668 C1orf210Q8IVY1 113 aa4.07□□□□□ -1.76
HMGN1P11-201ENST00000508668 CCDC83Q8IWF9 413 aa4.07□□□□□ -1.76
HMGN1P11-201ENST00000508668 KIAA2013Q8IYS2 634 aa4.07□□□□□ -1.76
HMGN1P11-201ENST00000508668 SYNPOQ8N3V7 929 aa4.07□□□□□ -1.76
HMGN1P11-201ENST00000508668 TMEM105Q8N8V8 129 aa4.07□□□□□ -1.76
HMGN1P11-201ENST00000508668 CCDC26Q8TAB7 109 aa4.07□□□□□ -1.76
HMGN1P11-201ENST00000508668 PIP4K2CQ8TBX8 421 aa4.07□□□□□ -1.76
HMGN1P11-201ENST00000508668 ING5Q8WYH8 240 aa4.07□□□□□ -1.76
HMGN1P11-201ENST00000508668 SEC14L1Q92503 715 aa4.07□□□□□ -1.76
HMGN1P11-201ENST00000508668 ALG3Q92685 438 aa4.07□□□□□ -1.76
HMGN1P11-201ENST00000508668 RABGGTAQ92696 567 aa4.07□□□□□ -1.76
HMGN1P11-201ENST00000508668 HAS1Q92839 578 aa4.07□□□□□ -1.76
HMGN1P11-201ENST00000508668 MCRS1Q96EZ8 462 aa4.07□□□□□ -1.76
HMGN1P11-201ENST00000508668 B3GALT6Q96L58 329 aa4.07□□□□□ -1.76
HMGN1P11-201ENST00000508668 SNX27Q96L92 541 aa4.07□□□□□ -1.76
HMGN1P11-201ENST00000508668 HSD17B14Q9BPX1 270 aa4.07□□□□□ -1.76
HMGN1P11-201ENST00000508668 TRMT61BQ9BVS5 477 aaKnown RBP4.07□□□□□ -1.76
HMGN1P11-201ENST00000508668 KRTAP4-9Q9BYQ8 210 aa4.07□□□□□ -1.76
HMGN1P11-201ENST00000508668 RHOBTB2Q9BYZ6 727 aa4.07□□□□□ -1.76
HMGN1P11-201ENST00000508668 DNAI2Q9GZS0 605 aa4.07□□□□□ -1.76
HMGN1P11-201ENST00000508668 PDZD7Q9H5P4 517 aa4.07□□□□□ -1.76
HMGN1P11-201ENST00000508668 MINDY3Q9H8M7 445 aa4.07□□□□□ -1.76
HMGN1P11-201ENST00000508668 TRIM39Q9HCM9 518 aa4.07□□□□□ -1.76
HMGN1P11-201ENST00000508668 CATSPERZQ9NTU4 200 aa4.07□□□□□ -1.76
HMGN1P11-201ENST00000508668 KCND2Q9NZV8 630 aa4.07□□□□□ -1.76
HMGN1P11-201ENST00000508668 MBD1Q9UIS9 605 aaPredicted RBP4.07□□□□□ -1.76
HMGN1P11-201ENST00000508668 MAFFQ9ULX9 164 aa4.07□□□□□ -1.76
HMGN1P11-201ENST00000508668 PLA2G2DQ9UNK4 145 aa4.07□□□□□ -1.76
HMGN1P11-201ENST00000508668 CHD7Q9P2D1 2997 aa4.07□□□□□ -1.76
HMGN1P11-201ENST00000508668 FNDC1Q4ZHG4 1894 aaPredicted RBP4.07□□□□□ -1.76
HMGN1P11-201ENST00000508668 PLXNA4Q9HCM2 1894 aa4.07□□□□□ -1.76
HMGN1P11-201ENST00000508668 CDH23Q9H251 3354 aa4.06□□□□□ -1.76
HMGN1P11-201ENST00000508668 LOXHD1Q8IVV2 1947 aa4.06□□□□□ -1.76
HMGN1P11-201ENST00000508668 VWA3AA6NCI4 1184 aa4.06□□□□□ -1.76
HMGN1P11-201ENST00000508668 PRR5-ARHGAP8B1AHC4 643 aa4.06□□□□□ -1.76
HMGN1P11-201ENST00000508668 PROB1E7EW31 1015 aa4.06□□□□□ -1.76
HMGN1P11-201ENST00000508668 HRKO00198 91 aa4.06□□□□□ -1.76
HMGN1P11-201ENST00000508668 KRIT1O00522 736 aa4.06□□□□□ -1.76
HMGN1P11-201ENST00000508668 NARSO43776 548 aaKnown RBP4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms