RNA–Protein interactions for RNA: ENST00000508546.5

NEDD9-211, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5

Gene NEDD9, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-211ENST00000508546 RDH13Q8NBN7 331 aa9.89□□□□□ -0.83
NEDD9-211ENST00000508546 ZNF516Q92618 1163 aa9.89□□□□□ -0.83
NEDD9-211ENST00000508546 BHMTQ93088 406 aa9.89□□□□□ -0.83
NEDD9-211ENST00000508546 IGSF8Q969P0 613 aa9.89□□□□□ -0.83
NEDD9-211ENST00000508546 P2RY11Q96G91 374 aa9.89□□□□□ -0.83
NEDD9-211ENST00000508546 SMYD3Q9H7B4 428 aa9.89□□□□□ -0.83
NEDD9-211ENST00000508546 OSER1Q9NX31 292 aa9.89□□□□□ -0.83
NEDD9-211ENST00000508546 PLK2Q9NYY3 685 aa9.89□□□□□ -0.83
NEDD9-211ENST00000508546 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.89□□□□□ -0.83
NEDD9-211ENST00000508546 SCML2Q9UQR0 700 aa9.89□□□□□ -0.83
NEDD9-211ENST00000508546 ANKRD6Q9Y2G4 727 aa9.89□□□□□ -0.83
NEDD9-211ENST00000508546 ZNF510Q9Y2H8 683 aa9.89□□□□□ -0.83
NEDD9-211ENST00000508546 SNX11Q9Y5W9 270 aa9.89□□□□□ -0.83
NEDD9-211ENST00000508546 CLIC4Q9Y696 253 aa9.89□□□□□ -0.83
NEDD9-211ENST00000508546 LRRK2Q5S007 2527 aa9.89□□□□□ -0.83
NEDD9-211ENST00000508546 DOPEY1Q5JWR5 2465 aa9.89□□□□□ -0.83
NEDD9-211ENST00000508546 TGFB1I1O43294 461 aa9.88□□□□□ -0.83
NEDD9-211ENST00000508546 STC2O76061 302 aa9.88□□□□□ -0.83
NEDD9-211ENST00000508546 CHKAP35790 457 aa9.88□□□□□ -0.83
NEDD9-211ENST00000508546 CCT8P50990 548 aa9.88□□□□□ -0.83
NEDD9-211ENST00000508546 CDH8P55286 799 aa9.88□□□□□ -0.83
NEDD9-211ENST00000508546 ZNF234Q14588 700 aa9.88□□□□□ -0.83
NEDD9-211ENST00000508546 RABEP1Q15276 862 aa9.88□□□□□ -0.83
NEDD9-211ENST00000508546 GEN1Q17RS7 908 aa9.88□□□□□ -0.83
NEDD9-211ENST00000508546 INAVAQ3KP66 663 aa9.88□□□□□ -0.83
NEDD9-211ENST00000508546 TAF1BQ53T94 588 aaPredicted RBP9.88□□□□□ -0.83
NEDD9-211ENST00000508546 ZNF667Q5HYK9 610 aa9.88□□□□□ -0.83
NEDD9-211ENST00000508546 FYB2Q5VWT5 728 aa9.88□□□□□ -0.83
NEDD9-211ENST00000508546 DHRS13Q6UX07 377 aa9.88□□□□□ -0.83
NEDD9-211ENST00000508546 EPM2AIP1Q7L775 607 aaPredicted RBP9.88□□□□□ -0.83
NEDD9-211ENST00000508546 ANKS1BQ7Z6G8 1248 aa9.88□□□□□ -0.83
NEDD9-211ENST00000508546 ACOT1Q86TX2 421 aa9.88□□□□□ -0.83
NEDD9-211ENST00000508546 CRYBG2Q8N1P7 616 aa9.88□□□□□ -0.83
NEDD9-211ENST00000508546 XXYLT1Q8NBI6 393 aa9.88□□□□□ -0.83
NEDD9-211ENST00000508546 RBBP8NLQ8NC74 664 aaPredicted RBP9.88□□□□□ -0.83
NEDD9-211ENST00000508546 ZNF507Q8TCN5 953 aa9.88□□□□□ -0.83
NEDD9-211ENST00000508546 CCDC127Q96BQ5 260 aa9.88□□□□□ -0.83
NEDD9-211ENST00000508546 NXPE2Q96DL1 559 aa9.88□□□□□ -0.83
NEDD9-211ENST00000508546 PIWIL1Q96J94 861 aaKnown RBP9.88□□□□□ -0.83
NEDD9-211ENST00000508546 BACH2Q9BYV9 841 aa9.88□□□□□ -0.83
NEDD9-211ENST00000508546 TRIM4Q9C037 500 aa9.88□□□□□ -0.83
NEDD9-211ENST00000508546 GZF1Q9H116 711 aaPredicted RBP9.88□□□□□ -0.83
NEDD9-211ENST00000508546 PNPLA8Q9NP80 782 aa9.88□□□□□ -0.83
NEDD9-211ENST00000508546 AGPAT3Q9NRZ7 376 aa9.88□□□□□ -0.83
NEDD9-211ENST00000508546 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.88□□□□□ -0.83
NEDD9-211ENST00000508546 ELOVL2Q9NXB9 296 aa9.88□□□□□ -0.83
NEDD9-211ENST00000508546 SMC3Q9UQE7 1217 aa9.88□□□□□ -0.83
NEDD9-211ENST00000508546 ZBTB32Q9Y2Y4 487 aaPredicted RBP9.88□□□□□ -0.83
NEDD9-211ENST00000508546 PCDHGA1Q9Y5H4 931 aa9.88□□□□□ -0.83
NEDD9-211ENST00000508546 SLCO1B1Q9Y6L6 691 aa9.88□□□□□ -0.83
NEDD9-211ENST00000508546 MORC2Q9Y6X9 1032 aaPredicted RBP9.88□□□□□ -0.83
NEDD9-211ENST00000508546 A0A087X0B3 334 aa9.87□□□□□ -0.83
NEDD9-211ENST00000508546 HHLA1C9JL84 531 aa9.87□□□□□ -0.83
NEDD9-211ENST00000508546 PLK4O00444 970 aa9.87□□□□□ -0.83
NEDD9-211ENST00000508546 TIMM44O43615 452 aa9.87□□□□□ -0.83
NEDD9-211ENST00000508546 DFNA5O60443 496 aa9.87□□□□□ -0.83
NEDD9-211ENST00000508546 PHACTR2O75167 634 aa9.87□□□□□ -0.83
NEDD9-211ENST00000508546 KLKB1P03952 638 aa9.87□□□□□ -0.83
NEDD9-211ENST00000508546 CDK4P11802 303 aa9.87□□□□□ -0.83
NEDD9-211ENST00000508546 RARGP13631 454 aa9.87□□□□□ -0.83
NEDD9-211ENST00000508546 KRT10P13645 584 aa9.87□□□□□ -0.83
NEDD9-211ENST00000508546 CCDC130P13994 396 aa9.87□□□□□ -0.83
NEDD9-211ENST00000508546 PRKCHP24723 683 aa9.87□□□□□ -0.83
NEDD9-211ENST00000508546 PSEN1P49768 467 aa9.87□□□□□ -0.83
NEDD9-211ENST00000508546 CSRP3P50461 194 aa9.87□□□□□ -0.83
NEDD9-211ENST00000508546 AP3M2P53677 418 aa9.87□□□□□ -0.83
NEDD9-211ENST00000508546 MAP3K7CLP57077 242 aa9.87□□□□□ -0.83
NEDD9-211ENST00000508546 CXADRP78310 365 aa9.87□□□□□ -0.83
NEDD9-211ENST00000508546 CAMK2GQ13555 558 aaPredicted RBP9.87□□□□□ -0.83
NEDD9-211ENST00000508546 BMT2Q1RMZ1 405 aa9.87□□□□□ -0.83
NEDD9-211ENST00000508546 ZNF699Q32M78 642 aa9.87□□□□□ -0.83
NEDD9-211ENST00000508546 C8orf34Q49A92 452 aa9.87□□□□□ -0.83
NEDD9-211ENST00000508546 LRRC69Q6ZNQ3 347 aa9.87□□□□□ -0.83
NEDD9-211ENST00000508546 OR2T3Q8NH03 318 aa9.87□□□□□ -0.83
NEDD9-211ENST00000508546 SLC2A14Q8TDB8 520 aa9.87□□□□□ -0.83
NEDD9-211ENST00000508546 SNX19Q92543 992 aa9.87□□□□□ -0.83
NEDD9-211ENST00000508546 HPS3Q969F9 1004 aa9.87□□□□□ -0.83
NEDD9-211ENST00000508546 CLIC6Q96NY7 704 aa9.87□□□□□ -0.83
NEDD9-211ENST00000508546 ARID3AQ99856 593 aa9.87□□□□□ -0.83
NEDD9-211ENST00000508546 SLC2A11Q9BYW1 496 aa9.87□□□□□ -0.83
NEDD9-211ENST00000508546 DCLK3Q9C098 648 aa9.87□□□□□ -0.83
NEDD9-211ENST00000508546 SDCBP2Q9H190 292 aa9.87□□□□□ -0.83
NEDD9-211ENST00000508546 C6orf106Q9H6K1 298 aaPredicted RBP9.87□□□□□ -0.83
NEDD9-211ENST00000508546 NMUR1Q9HB89 426 aa9.87□□□□□ -0.83
NEDD9-211ENST00000508546 TM9SF3Q9HD45 589 aa9.87□□□□□ -0.83
NEDD9-211ENST00000508546 FTSJ1Q9UET6 329 aa9.87□□□□□ -0.83
NEDD9-211ENST00000508546 PCDHA5Q9Y5H7 936 aa9.87□□□□□ -0.83
NEDD9-211ENST00000508546 ABCA12Q86UK0 2595 aa9.87□□□□□ -0.83
NEDD9-211ENST00000508546 NBPF19A0A087WUL8 3843 aa9.86□□□□□ -0.83
NEDD9-211ENST00000508546 UBE4BO95155 1302 aa9.86□□□□□ -0.83
NEDD9-211ENST00000508546 A0A1W2PQH9 124 aa9.86□□□□□ -0.83
NEDD9-211ENST00000508546 H0Y8X5 98 aa9.86□□□□□ -0.83
NEDD9-211ENST00000508546 MDM4O15151 490 aa9.86□□□□□ -0.83
NEDD9-211ENST00000508546 CLIC2O15247 247 aa9.86□□□□□ -0.83
NEDD9-211ENST00000508546 CYP26A1O43174 497 aa9.86□□□□□ -0.83
NEDD9-211ENST00000508546 TSPAN3O60637 253 aa9.86□□□□□ -0.83
NEDD9-211ENST00000508546 EPHX1P07099 455 aa9.86□□□□□ -0.83
NEDD9-211ENST00000508546 C1SP09871 688 aa9.86□□□□□ -0.83
NEDD9-211ENST00000508546 FAM200BP0CF97 657 aa9.86□□□□□ -0.83
NEDD9-211ENST00000508546 C6P13671 934 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms