RNA–Protein interactions for RNA: ENST00000508319.1

HMGCS1-205, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 3

Gene HMGCS1, Length 591 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-205ENST00000508319 SYT12Q8IV01 421 aa13.62□□□□□ -0.23
HMGCS1-205ENST00000508319 DENND1CQ8IV53 801 aa13.62□□□□□ -0.23
HMGCS1-205ENST00000508319 CPXM2Q8N436 756 aa13.62□□□□□ -0.23
HMGCS1-205ENST00000508319 PLD4Q96BZ4 506 aa13.62□□□□□ -0.23
HMGCS1-205ENST00000508319 CEP63Q96MT8 703 aa13.62□□□□□ -0.23
HMGCS1-205ENST00000508319 DCLK3Q9C098 648 aa13.62□□□□□ -0.23
HMGCS1-205ENST00000508319 METTL14Q9HCE5 456 aaKnown RBP13.62□□□□□ -0.23
HMGCS1-205ENST00000508319 TMEM9BQ9NQ34 198 aa13.62□□□□□ -0.23
HMGCS1-205ENST00000508319 HESX1Q9UBX0 185 aa13.62□□□□□ -0.23
HMGCS1-205ENST00000508319 STRIP2Q9ULQ0 834 aa13.62□□□□□ -0.23
HMGCS1-205ENST00000508319 MUC22E2RYF6 1773 aaPredicted RBP13.62□□□□□ -0.23
HMGCS1-205ENST00000508319 ADAMTS9Q9P2N4 1935 aa13.61□□□□□ -0.23
HMGCS1-205ENST00000508319 SLC12A8A0AV02 714 aa13.61□□□□□ -0.23
HMGCS1-205ENST00000508319 YJEFN3A6XGL0 299 aa13.61□□□□□ -0.23
HMGCS1-205ENST00000508319 WASH3PC4AMC7 463 aa13.61□□□□□ -0.23
HMGCS1-205ENST00000508319 E7ENQ6 273 aa13.61□□□□□ -0.23
HMGCS1-205ENST00000508319 AP5Z1O43299 807 aa13.61□□□□□ -0.23
HMGCS1-205ENST00000508319 PAEPP09466 180 aa13.61□□□□□ -0.23
HMGCS1-205ENST00000508319 SETSIPP0DME0 302 aa13.61□□□□□ -0.23
HMGCS1-205ENST00000508319 VDRP11473 427 aa13.61□□□□□ -0.23
HMGCS1-205ENST00000508319 ITPKAP23677 461 aa13.61□□□□□ -0.23
HMGCS1-205ENST00000508319 HOXD12P35452 270 aa13.61□□□□□ -0.23
HMGCS1-205ENST00000508319 RPL6Q02878 288 aaKnown RBP13.61□□□□□ -0.23
HMGCS1-205ENST00000508319 TRIP4Q15650 581 aaPredicted RBP13.61□□□□□ -0.23
HMGCS1-205ENST00000508319 SDE2Q6IQ49 451 aa13.61□□□□□ -0.23
HMGCS1-205ENST00000508319 PSAPL1Q6NUJ1 521 aa13.61□□□□□ -0.23
HMGCS1-205ENST00000508319 TMEM270Q6UE05 265 aa13.61□□□□□ -0.23
HMGCS1-205ENST00000508319 FMNL3Q8IVF7 1028 aa13.61□□□□□ -0.23
HMGCS1-205ENST00000508319 SIX6OS1Q8N1H7 587 aa13.61□□□□□ -0.23
HMGCS1-205ENST00000508319 UBA3Q8TBC4 463 aa13.61□□□□□ -0.23
HMGCS1-205ENST00000508319 KCTD13Q8WZ19 329 aa13.61□□□□□ -0.23
HMGCS1-205ENST00000508319 TFAP2BQ92481 460 aa13.61□□□□□ -0.23
HMGCS1-205ENST00000508319 KAT5Q92993 513 aa13.61□□□□□ -0.23
HMGCS1-205ENST00000508319 MRGPRX1Q96LB2 322 aa13.61□□□□□ -0.23
HMGCS1-205ENST00000508319 ZSWIM1Q9BR11 485 aa13.61□□□□□ -0.23
HMGCS1-205ENST00000508319 SLC6A17Q9H1V8 727 aa13.61□□□□□ -0.23
HMGCS1-205ENST00000508319 LRRC4Q9HBW1 653 aa13.61□□□□□ -0.23
HMGCS1-205ENST00000508319 CD93Q9NPY3 652 aa13.61□□□□□ -0.23
HMGCS1-205ENST00000508319 PILRBQ9UKJ0 227 aa13.61□□□□□ -0.23
HMGCS1-205ENST00000508319 CLEC4EQ9ULY5 219 aa13.61□□□□□ -0.23
HMGCS1-205ENST00000508319 CYP8B1Q9UNU6 501 aa13.61□□□□□ -0.23
HMGCS1-205ENST00000508319 ZFHX4Q86UP3 3567 aa13.61□□□□□ -0.23
HMGCS1-205ENST00000508319 PPP1R3GB7ZBB8 358 aa13.6□□□□□ -0.23
HMGCS1-205ENST00000508319 GABBR2O75899 941 aa13.6□□□□□ -0.23
HMGCS1-205ENST00000508319 PPP1R2P41236 205 aa13.6□□□□□ -0.23
HMGCS1-205ENST00000508319 IL12RB1P42701 662 aa13.6□□□□□ -0.23
HMGCS1-205ENST00000508319 DAOAP59103 153 aa13.6□□□□□ -0.23
HMGCS1-205ENST00000508319 ENPP2Q13822 863 aa13.6□□□□□ -0.23
HMGCS1-205ENST00000508319 CCDC40Q4G0X9 1142 aa13.6□□□□□ -0.23
HMGCS1-205ENST00000508319 DAB2IPQ5VWQ8 1189 aa13.6□□□□□ -0.23
HMGCS1-205ENST00000508319 KLHL10Q6JEL2 608 aa13.6□□□□□ -0.23
HMGCS1-205ENST00000508319 FOXR2Q6PJQ5 311 aa13.6□□□□□ -0.23
HMGCS1-205ENST00000508319 LCLAT1Q6UWP7 414 aa13.6□□□□□ -0.23
HMGCS1-205ENST00000508319 SLC36A4Q6YBV0 504 aa13.6□□□□□ -0.23
HMGCS1-205ENST00000508319 ANKS1BQ7Z6G8 1248 aa13.6□□□□□ -0.23
HMGCS1-205ENST00000508319 SCML4Q8N228 414 aa13.6□□□□□ -0.23
HMGCS1-205ENST00000508319 RBBP8NLQ8NC74 664 aaPredicted RBP13.6□□□□□ -0.23
HMGCS1-205ENST00000508319 LMO3Q8TAP4 145 aa13.6□□□□□ -0.23
HMGCS1-205ENST00000508319 EDEM1Q92611 657 aa13.6□□□□□ -0.23
HMGCS1-205ENST00000508319 PIWIL1Q96J94 861 aaKnown RBP13.6□□□□□ -0.23
HMGCS1-205ENST00000508319 NT5C1BQ96P26 610 aa13.6□□□□□ -0.23
HMGCS1-205ENST00000508319 IPO9Q96P70 1041 aaKnown RBP13.6□□□□□ -0.23
HMGCS1-205ENST00000508319 CNGB3Q9NQW8 809 aa13.6□□□□□ -0.23
HMGCS1-205ENST00000508319 OLA1Q9NTK5 396 aaKnown RBP13.6□□□□□ -0.23
HMGCS1-205ENST00000508319 THAP10Q9P2Z0 257 aaPredicted RBP13.6□□□□□ -0.23
HMGCS1-205ENST00000508319 KIAA1257Q9ULG3 409 aa13.6□□□□□ -0.23
HMGCS1-205ENST00000508319 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.6□□□□□ -0.23
HMGCS1-205ENST00000508319 STON1Q9Y6Q2 735 aa13.6□□□□□ -0.23
HMGCS1-205ENST00000508319 IGF2RP11717 2491 aa13.59□□□□□ -0.23
HMGCS1-205ENST00000508319 WDFY3Q8IZQ1 3526 aa13.59□□□□□ -0.23
HMGCS1-205ENST00000508319 GIPC1O14908 333 aa13.59□□□□□ -0.23
HMGCS1-205ENST00000508319 P4HA2O15460 535 aa13.59□□□□□ -0.23
HMGCS1-205ENST00000508319 MSI1O43347 362 aaKnown RBP13.59□□□□□ -0.23
HMGCS1-205ENST00000508319 ZNF217O75362 1048 aa13.59□□□□□ -0.23
HMGCS1-205ENST00000508319 ENGP17813 658 aa13.59□□□□□ -0.23
HMGCS1-205ENST00000508319 HOXD9P28356 352 aaPredicted RBP13.59□□□□□ -0.23
HMGCS1-205ENST00000508319 DPP6P42658 865 aa13.59□□□□□ -0.23
HMGCS1-205ENST00000508319 NOVA1P51513 510 aaKnown RBP13.59□□□□□ -0.23
HMGCS1-205ENST00000508319 ZNF132P52740 706 aa13.59□□□□□ -0.23
HMGCS1-205ENST00000508319 SHC2P98077 582 aa13.59□□□□□ -0.23
HMGCS1-205ENST00000508319 LMAN2Q12907 356 aa13.59□□□□□ -0.23
HMGCS1-205ENST00000508319 MORC3Q14149 939 aa13.59□□□□□ -0.23
HMGCS1-205ENST00000508319 EIF4HQ15056 248 aaKnown RBP13.59□□□□□ -0.23
HMGCS1-205ENST00000508319 FUT11Q495W5 492 aa13.59□□□□□ -0.23
HMGCS1-205ENST00000508319 BSPRYQ5W0U4 402 aa13.59□□□□□ -0.23
HMGCS1-205ENST00000508319 SLC23A3Q6PIS1 610 aa13.59□□□□□ -0.23
HMGCS1-205ENST00000508319 SLC41A1Q8IVJ1 513 aa13.59□□□□□ -0.23
HMGCS1-205ENST00000508319 TRIM59Q8IWR1 403 aa13.59□□□□□ -0.23
HMGCS1-205ENST00000508319 PPM1KQ8N3J5 372 aa13.59□□□□□ -0.23
HMGCS1-205ENST00000508319 DEFB119Q8N690 84 aa13.59□□□□□ -0.23
HMGCS1-205ENST00000508319 SLC35F5Q8WV83 523 aa13.59□□□□□ -0.23
HMGCS1-205ENST00000508319 NELFBQ8WX92 580 aa13.59□□□□□ -0.23
HMGCS1-205ENST00000508319 NUSAP1Q9BXS6 441 aaKnown RBP13.59□□□□□ -0.23
HMGCS1-205ENST00000508319 MKRN2Q9H000 416 aaKnown RBP13.59□□□□□ -0.23
HMGCS1-205ENST00000508319 SFMBT1Q9UHJ3 866 aa13.59□□□□□ -0.23
HMGCS1-205ENST00000508319 STOML2Q9UJZ1 356 aa13.59□□□□□ -0.23
HMGCS1-205ENST00000508319 ANGPTL2Q9UKU9 493 aa13.59□□□□□ -0.23
HMGCS1-205ENST00000508319 CTNND2Q9UQB3 1225 aa13.59□□□□□ -0.23
HMGCS1-205ENST00000508319 HBS1LQ9Y450 684 aaKnown RBP13.59□□□□□ -0.23
HMGCS1-205ENST00000508319 PCDHB4Q9Y5E5 795 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms