RNA–Protein interactions for RNA: ENST00000507944.5

CLDND1-216, Transcript of claudin domain containing 1, humanhuman

TSL 4

Gene CLDND1, Length 903 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-216ENST00000507944 PLD4Q96BZ4 506 aa21.79■■□□□ 1.08
CLDND1-216ENST00000507944 RAD54BQ9Y620 910 aa21.79■■□□□ 1.08
CLDND1-216ENST00000507944 EPG5Q9HCE0 2579 aa21.78■■□□□ 1.08
CLDND1-216ENST00000507944 BICDL2A1A5D9 508 aa21.78■■□□□ 1.08
CLDND1-216ENST00000507944 WASH3PC4AMC7 463 aa21.78■■□□□ 1.08
CLDND1-216ENST00000507944 P4HA2O15460 535 aa21.78■■□□□ 1.08
CLDND1-216ENST00000507944 AP5Z1O43299 807 aa21.78■■□□□ 1.08
CLDND1-216ENST00000507944 ZNF217O75362 1048 aa21.78■■□□□ 1.08
CLDND1-216ENST00000507944 NDUFV2P19404 249 aa21.78■■□□□ 1.08
CLDND1-216ENST00000507944 RPL6Q02878 288 aaKnown RBP21.78■■□□□ 1.08
CLDND1-216ENST00000507944 MORC3Q14149 939 aa21.78■■□□□ 1.08
CLDND1-216ENST00000507944 TRIP4Q15650 581 aaPredicted RBP21.78■■□□□ 1.08
CLDND1-216ENST00000507944 N4BP2L1Q5TBK1 243 aaPredicted RBP21.78■■□□□ 1.08
CLDND1-216ENST00000507944 DAB2IPQ5VWQ8 1189 aa21.78■■□□□ 1.08
CLDND1-216ENST00000507944 LYSMD4Q5XG99 296 aa21.78■■□□□ 1.08
CLDND1-216ENST00000507944 FOXR2Q6PJQ5 311 aa21.78■■□□□ 1.08
CLDND1-216ENST00000507944 FMNL3Q8IVF7 1028 aa21.78■■□□□ 1.08
CLDND1-216ENST00000507944 PPM1KQ8N3J5 372 aa21.78■■□□□ 1.08
CLDND1-216ENST00000507944 LMO3Q8TAP4 145 aa21.78■■□□□ 1.08
CLDND1-216ENST00000507944 EDEM1Q92611 657 aa21.78■■□□□ 1.08
CLDND1-216ENST00000507944 TMEM9BQ9NQ34 198 aa21.78■■□□□ 1.08
CLDND1-216ENST00000507944 TMEM74BQ9NUR3 256 aa21.78■■□□□ 1.08
CLDND1-216ENST00000507944 EVLQ9UI08 416 aaPredicted RBP21.78■■□□□ 1.08
CLDND1-216ENST00000507944 CHD8Q9HCK8 2581 aa21.77■■□□□ 1.08
CLDND1-216ENST00000507944 YJEFN3A6XGL0 299 aa21.77■■□□□ 1.08
CLDND1-216ENST00000507944 E7ENQ6 273 aa21.77■■□□□ 1.08
CLDND1-216ENST00000507944 RNF225M0QZC1 329 aaPredicted RBP21.77■■□□□ 1.08
CLDND1-216ENST00000507944 BIN1O00499 593 aa21.77■■□□□ 1.08
CLDND1-216ENST00000507944 GADD45BO75293 160 aaPredicted RBP21.77■■□□□ 1.08
CLDND1-216ENST00000507944 KCNK5O95279 499 aa21.77■■□□□ 1.08
CLDND1-216ENST00000507944 LCP1P13796 627 aa21.77■■□□□ 1.08
CLDND1-216ENST00000507944 DPP6P42658 865 aa21.77■■□□□ 1.08
CLDND1-216ENST00000507944 HARS2P49590 506 aaKnown RBP21.77■■□□□ 1.08
CLDND1-216ENST00000507944 CNGA2Q16280 664 aa21.77■■□□□ 1.08
CLDND1-216ENST00000507944 GEN1Q17RS7 908 aa21.77■■□□□ 1.08
CLDND1-216ENST00000507944 TRIM61Q5EBN2 209 aa21.77■■□□□ 1.08
CLDND1-216ENST00000507944 FAM217AQ8IXS0 508 aa21.77■■□□□ 1.08
CLDND1-216ENST00000507944 SCML4Q8N228 414 aa21.77■■□□□ 1.08
CLDND1-216ENST00000507944 DEFB119Q8N690 84 aa21.77■■□□□ 1.08
CLDND1-216ENST00000507944 DDI1Q8WTU0 396 aa21.77■■□□□ 1.08
CLDND1-216ENST00000507944 UCMAQ8WVF2 138 aa21.77■■□□□ 1.08
CLDND1-216ENST00000507944 KAT5Q92993 513 aa21.77■■□□□ 1.08
CLDND1-216ENST00000507944 CNGB3Q9NQW8 809 aa21.77■■□□□ 1.08
CLDND1-216ENST00000507944 ABCC13Q9NSE7 274 aa21.77■■□□□ 1.08
CLDND1-216ENST00000507944 SFMBT1Q9UHJ3 866 aa21.77■■□□□ 1.08
CLDND1-216ENST00000507944 CLEC4EQ9ULY5 219 aa21.77■■□□□ 1.08
CLDND1-216ENST00000507944 CTNND2Q9UQB3 1225 aa21.77■■□□□ 1.08
CLDND1-216ENST00000507944 HBS1LQ9Y450 684 aaKnown RBP21.77■■□□□ 1.08
CLDND1-216ENST00000507944 STON1Q9Y6Q2 735 aa21.77■■□□□ 1.08
CLDND1-216ENST00000507944 PCNX2A6NKB5 2137 aa21.77■■□□□ 1.08
CLDND1-216ENST00000507944 IGHV1OR15-9A0A0B4J2B8 117 aa21.76■■□□□ 1.07
CLDND1-216ENST00000507944 CDX4O14627 284 aaPredicted RBP21.76■■□□□ 1.07
CLDND1-216ENST00000507944 ITPKAP23677 461 aa21.76■■□□□ 1.07
CLDND1-216ENST00000507944 LAMA1P25391 3075 aa21.76■■□□□ 1.07
CLDND1-216ENST00000507944 RGS7P49802 495 aa21.76■■□□□ 1.07
CLDND1-216ENST00000507944 STX17P56962 302 aa21.76■■□□□ 1.07
CLDND1-216ENST00000507944 EHBP1Q8NDI1 1231 aa21.76■■□□□ 1.07
CLDND1-216ENST00000507944 SLC35F5Q8WV83 523 aa21.76■■□□□ 1.07
CLDND1-216ENST00000507944 PIWIL1Q96J94 861 aaKnown RBP21.76■■□□□ 1.07
CLDND1-216ENST00000507944 NUSAP1Q9BXS6 441 aaKnown RBP21.76■■□□□ 1.07
CLDND1-216ENST00000507944 SLC2A11Q9BYW1 496 aa21.76■■□□□ 1.07
CLDND1-216ENST00000507944 THAP10Q9P2Z0 257 aaPredicted RBP21.76■■□□□ 1.07
CLDND1-216ENST00000507944 PILRBQ9UKJ0 227 aa21.76■■□□□ 1.07
CLDND1-216ENST00000507944 CYP8B1Q9UNU6 501 aa21.76■■□□□ 1.07
CLDND1-216ENST00000507944 NPC1O15118 1278 aa21.75■■□□□ 1.07
CLDND1-216ENST00000507944 GABBR2O75899 941 aa21.75■■□□□ 1.07
CLDND1-216ENST00000507944 GNA14O95837 355 aa21.75■■□□□ 1.07
CLDND1-216ENST00000507944 DAOAP59103 153 aa21.75■■□□□ 1.07
CLDND1-216ENST00000507944 KCNH2Q12809 1159 aa21.75■■□□□ 1.07
CLDND1-216ENST00000507944 LMAN2Q12907 356 aa21.75■■□□□ 1.07
CLDND1-216ENST00000507944 STILQ15468 1287 aa21.75■■□□□ 1.07
CLDND1-216ENST00000507944 PMF1Q6P1K2 205 aa21.75■■□□□ 1.07
CLDND1-216ENST00000507944 RRAGAQ7L523 313 aa21.75■■□□□ 1.07
CLDND1-216ENST00000507944 ANKS1BQ7Z6G8 1248 aa21.75■■□□□ 1.07
CLDND1-216ENST00000507944 TRIM59Q8IWR1 403 aa21.75■■□□□ 1.07
CLDND1-216ENST00000507944 MRGPRX1Q96LB2 322 aa21.75■■□□□ 1.07
CLDND1-216ENST00000507944 ZSWIM1Q9BR11 485 aa21.75■■□□□ 1.07
CLDND1-216ENST00000507944 SLC6A17Q9H1V8 727 aa21.75■■□□□ 1.07
CLDND1-216ENST00000507944 ELOVL2Q9NXB9 296 aa21.75■■□□□ 1.07
CLDND1-216ENST00000507944 WDR3Q9UNX4 943 aaKnown RBP eCLIP21.75■■□□□ 1.07
CLDND1-216ENST00000507944 MAP1BP46821 2468 aaKnown RBP21.75■■□□□ 1.07
CLDND1-216ENST00000507944 BRD2P25440 801 aaKnown RBP21.74■■□□□ 1.07
CLDND1-216ENST00000507944 ZNF33AQ06730 810 aa21.74■■□□□ 1.07
CLDND1-216ENST00000507944 PAK1Q13153 545 aa21.74■■□□□ 1.07
CLDND1-216ENST00000507944 STARD3Q14849 445 aa21.74■■□□□ 1.07
CLDND1-216ENST00000507944 MPPE1Q53F39 396 aa21.74■■□□□ 1.07
CLDND1-216ENST00000507944 PSAPL1Q6NUJ1 521 aa21.74■■□□□ 1.07
CLDND1-216ENST00000507944 SLC23A3Q6PIS1 610 aa21.74■■□□□ 1.07
CLDND1-216ENST00000507944 ARHGEF19Q8IW93 802 aa21.74■■□□□ 1.07
CLDND1-216ENST00000507944 RBBP8NLQ8NC74 664 aaPredicted RBP21.74■■□□□ 1.07
CLDND1-216ENST00000507944 SRRTQ9BXP5 876 aaKnown RBP21.74■■□□□ 1.07
CLDND1-216ENST00000507944 ATXN2Q99700 1313 aaKnown RBP21.74■■□□□ 1.07
CLDND1-216ENST00000507944 M0QYV0 167 aa21.73■■□□□ 1.07
CLDND1-216ENST00000507944 PIK3R2O00459 728 aa21.73■■□□□ 1.07
CLDND1-216ENST00000507944 TSPAN3O60637 253 aa21.73■■□□□ 1.07
CLDND1-216ENST00000507944 CALCAP01258 141 aa21.73■■□□□ 1.07
CLDND1-216ENST00000507944 HOXD12P35452 270 aa21.73■■□□□ 1.07
CLDND1-216ENST00000507944 IL12RB1P42701 662 aa21.73■■□□□ 1.07
CLDND1-216ENST00000507944 ZNF132P52740 706 aa21.73■■□□□ 1.07
CLDND1-216ENST00000507944 MARSP56192 900 aaKnown RBP21.73■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms