RNA–Protein interactions for RNA: ENST00000506896.1

SNX25-204, Transcript of sorting nexin 25, humanhuman

TSL 2

Gene SNX25, Length 518 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25-204ENST00000506896 IER2Q9BTL4 223 aa20.71■□□□□ 0.91
SNX25-204ENST00000506896 SPHK2Q9NRA0 654 aa20.71■□□□□ 0.91
SNX25-204ENST00000506896 SEPT11Q9NVA2 429 aaKnown RBP20.71■□□□□ 0.91
SNX25-204ENST00000506896 TLR6Q9Y2C9 796 aa20.71■□□□□ 0.91
SNX25-204ENST00000506896 LUC7L2Q9Y383 392 aaKnown RBP20.71■□□□□ 0.91
SNX25-204ENST00000506896 ATG2BQ96BY7 2078 aa20.7■□□□□ 0.9
SNX25-204ENST00000506896 TRDMT1O14717 391 aaKnown RBP20.7■□□□□ 0.9
SNX25-204ENST00000506896 LATS1O95835 1130 aa20.7■□□□□ 0.9
SNX25-204ENST00000506896 KLKB1P03952 638 aa20.7■□□□□ 0.9
SNX25-204ENST00000506896 ADH5P11766 374 aa20.7■□□□□ 0.9
SNX25-204ENST00000506896 CDK17Q00537 523 aa20.7■□□□□ 0.9
SNX25-204ENST00000506896 GAD2Q05329 585 aa20.7■□□□□ 0.9
SNX25-204ENST00000506896 CCINQ13939 588 aa20.7■□□□□ 0.9
SNX25-204ENST00000506896 PON2Q15165 354 aa20.7■□□□□ 0.9
SNX25-204ENST00000506896 DCAF6Q58WW2 860 aa20.7■□□□□ 0.9
SNX25-204ENST00000506896 DGKKQ5KSL6 1271 aa20.7■□□□□ 0.9
SNX25-204ENST00000506896 SYPL2Q5VXT5 272 aa20.7■□□□□ 0.9
SNX25-204ENST00000506896 SPECC1LQ69YQ0 1117 aa20.7■□□□□ 0.9
SNX25-204ENST00000506896 SARM1Q6SZW1 724 aa20.7■□□□□ 0.9
SNX25-204ENST00000506896 XYLT1Q86Y38 959 aa20.7■□□□□ 0.9
SNX25-204ENST00000506896 NELL1Q92832 810 aa20.7■□□□□ 0.9
SNX25-204ENST00000506896 PCDHB18PQ96TA0 734 aa20.7■□□□□ 0.9
SNX25-204ENST00000506896 TMEM51Q9NW97 253 aa20.7■□□□□ 0.9
SNX25-204ENST00000506896 RRN3Q9NYV6 651 aa20.7■□□□□ 0.9
SNX25-204ENST00000506896 BZW2Q9Y6E2 419 aaKnown RBP20.7■□□□□ 0.9
SNX25-204ENST00000506896 MYOFQ9NZM1 2061 aa20.69■□□□□ 0.9
SNX25-204ENST00000506896 HOXC11O43248 304 aaPredicted RBP20.69■□□□□ 0.9
SNX25-204ENST00000506896 MSI1O43347 362 aaKnown RBP20.69■□□□□ 0.9
SNX25-204ENST00000506896 DAB1O75553 588 aa20.69■□□□□ 0.9
SNX25-204ENST00000506896 IGLV3-27P01718 113 aa20.69■□□□□ 0.9
SNX25-204ENST00000506896 TNFAIP3P21580 790 aa20.69■□□□□ 0.9
SNX25-204ENST00000506896 EIF2DP41214 584 aaKnown RBP20.69■□□□□ 0.9
SNX25-204ENST00000506896 TBX4P57082 545 aa20.69■□□□□ 0.9
SNX25-204ENST00000506896 KLHL30Q0D2K2 578 aa20.69■□□□□ 0.9
SNX25-204ENST00000506896 GRSF1Q12849 480 aaKnown RBP eCLIP20.69■□□□□ 0.9
SNX25-204ENST00000506896 LRRC32Q14392 662 aa20.69■□□□□ 0.9
SNX25-204ENST00000506896 TAF5Q15542 800 aa20.69■□□□□ 0.9
SNX25-204ENST00000506896 LY6G5CQ5SRR4 150 aa20.69■□□□□ 0.9
SNX25-204ENST00000506896 FAM102AQ5T9C2 384 aaPredicted RBP20.69■□□□□ 0.9
SNX25-204ENST00000506896 ARCQ7LC44 396 aa20.69■□□□□ 0.9
SNX25-204ENST00000506896 PHF13Q86YI8 300 aaPredicted RBP20.69■□□□□ 0.9
SNX25-204ENST00000506896 DENND1CQ8IV53 801 aa20.69■□□□□ 0.9
SNX25-204ENST00000506896 DEFB106AQ8N104 65 aa20.69■□□□□ 0.9
SNX25-204ENST00000506896 P2RY13Q9BPV8 354 aa20.69■□□□□ 0.9
SNX25-204ENST00000506896 SYT11Q9BT88 431 aa20.69■□□□□ 0.9
SNX25-204ENST00000506896 HAUS4Q9H6D7 363 aa20.69■□□□□ 0.9
SNX25-204ENST00000506896 PRMT8Q9NR22 394 aaPredicted RBP20.69■□□□□ 0.9
SNX25-204ENST00000506896 RBM12Q9NTZ6 932 aaKnown RBP20.69■□□□□ 0.9
SNX25-204ENST00000506896 MARK1Q9P0L2 795 aa20.69■□□□□ 0.9
SNX25-204ENST00000506896 WDR35Q9P2L0 1181 aa20.69■□□□□ 0.9
SNX25-204ENST00000506896 AGO1Q9UL18 857 aaKnown RBP20.69■□□□□ 0.9
SNX25-204ENST00000506896 TRUB2O95900 331 aaKnown RBP20.68■□□□□ 0.9
SNX25-204ENST00000506896 GYPCP04921 128 aa20.68■□□□□ 0.9
SNX25-204ENST00000506896 GBP1P32455 592 aa20.68■□□□□ 0.9
SNX25-204ENST00000506896 NOS2P35228 1153 aa20.68■□□□□ 0.9
SNX25-204ENST00000506896 TMEM196Q5HYL7 178 aa20.68■□□□□ 0.9
SNX25-204ENST00000506896 MMS22LQ6ZRQ5 1243 aa20.68■□□□□ 0.9
SNX25-204ENST00000506896 ASCL5Q7RTU5 278 aa20.68■□□□□ 0.9
SNX25-204ENST00000506896 TAC4Q86UU9 113 aa20.68■□□□□ 0.9
SNX25-204ENST00000506896 SYNPOQ8N3V7 929 aa20.68■□□□□ 0.9
SNX25-204ENST00000506896 CPXM2Q8N436 756 aa20.68■□□□□ 0.9
SNX25-204ENST00000506896 SLC30A5Q8TAD4 765 aa20.68■□□□□ 0.9
SNX25-204ENST00000506896 CPLX3Q8WVH0 158 aa20.68■□□□□ 0.9
SNX25-204ENST00000506896 CD101Q93033 1021 aa20.68■□□□□ 0.9
SNX25-204ENST00000506896 AZIN2Q96A70 460 aa20.68■□□□□ 0.9
SNX25-204ENST00000506896 STOML2Q9UJZ1 356 aa20.68■□□□□ 0.9
SNX25-204ENST00000506896 STAP1Q9ULZ2 295 aa20.68■□□□□ 0.9
SNX25-204ENST00000506896 PTPRZ1P23471 2315 aaPredicted RBP20.68■□□□□ 0.9
SNX25-204ENST00000506896 FAM186AA6NE01 2351 aa20.68■□□□□ 0.9
SNX25-204ENST00000506896 PRR23AA6NEV1 266 aa20.67■□□□□ 0.9
SNX25-204ENST00000506896 PALM2-AKAP2B1ALY0 433 aaPredicted RBP20.67■□□□□ 0.9
SNX25-204ENST00000506896 GRAP2O75791 330 aa20.67■□□□□ 0.9
SNX25-204ENST00000506896 IGLV3-25P01717 112 aa20.67■□□□□ 0.9
SNX25-204ENST00000506896 CALB1P05937 261 aa20.67■□□□□ 0.9
SNX25-204ENST00000506896 TDGF1P13385 188 aa20.67■□□□□ 0.9
SNX25-204ENST00000506896 DRD1P21728 446 aa20.67■□□□□ 0.9
SNX25-204ENST00000506896 MATKP42679 507 aa20.67■□□□□ 0.9
SNX25-204ENST00000506896 SLC11A2P49281 568 aa20.67■□□□□ 0.9
SNX25-204ENST00000506896 GSCP56915 257 aaPredicted RBP20.67■□□□□ 0.9
SNX25-204ENST00000506896 CSTF1Q05048 431 aaKnown RBP20.67■□□□□ 0.9
SNX25-204ENST00000506896 C1QBPQ07021 282 aaKnown RBP20.67■□□□□ 0.9
SNX25-204ENST00000506896 PREPLQ4J6C6 727 aaPredicted RBP20.67■□□□□ 0.9
SNX25-204ENST00000506896 E4F1Q66K89 784 aaPredicted RBP20.67■□□□□ 0.9
SNX25-204ENST00000506896 TMEM25Q86YD3 366 aa20.67■□□□□ 0.9
SNX25-204ENST00000506896 VSTM4Q8IW00 320 aa20.67■□□□□ 0.9
SNX25-204ENST00000506896 FAM217AQ8IXS0 508 aa20.67■□□□□ 0.9
SNX25-204ENST00000506896 NKD2Q969F2 451 aaPredicted RBP20.67■□□□□ 0.9
SNX25-204ENST00000506896 C11orf70Q9BRQ4 267 aa20.67■□□□□ 0.9
SNX25-204ENST00000506896 RBSNQ9H1K0 784 aa20.67■□□□□ 0.9
SNX25-204ENST00000506896 SEMA4AQ9H3S1 761 aa20.67■□□□□ 0.9
SNX25-204ENST00000506896 FAM204AQ9H8W3 233 aa20.67■□□□□ 0.9
SNX25-204ENST00000506896 FBRSL1Q9HCM7 1045 aaKnown RBP20.67■□□□□ 0.9
SNX25-204ENST00000506896 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP20.67■□□□□ 0.9
SNX25-204ENST00000506896 ADAM22Q9P0K1 906 aa20.67■□□□□ 0.9
SNX25-204ENST00000506896 R4GN57 208 aa20.67■□□□□ 0.9
SNX25-204ENST00000506896 IRAK2O43187 625 aa20.66■□□□□ 0.9
SNX25-204ENST00000506896 GFRA3O60609 400 aa20.66■□□□□ 0.9
SNX25-204ENST00000506896 TPM1P09493 284 aa20.66■□□□□ 0.9
SNX25-204ENST00000506896 SLC2A3P11169 496 aa20.66■□□□□ 0.9
SNX25-204ENST00000506896 CASP14P31944 242 aa20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms