RNA–Protein interactions for RNA: ENST00000506783.5

PHF3-208, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best)

Gene PHF3, Length 3,700 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-208ENST00000506783 T-ENOLP0DO92 83 aa9.91□□□□□ -0.82
PHF3-208ENST00000506783 ZNF268Q14587 947 aaPredicted RBP9.91□□□□□ -0.82
PHF3-208ENST00000506783 MMEL1Q495T6 779 aa9.91□□□□□ -0.82
PHF3-208ENST00000506783 TMEM198Q66K66 360 aa9.91□□□□□ -0.82
PHF3-208ENST00000506783 CYP2R1Q6VVX0 501 aa9.91□□□□□ -0.82
PHF3-208ENST00000506783 LDB1Q86U70 411 aaPredicted RBP9.91□□□□□ -0.82
PHF3-208ENST00000506783 SCN4BQ8IWT1 228 aa9.91□□□□□ -0.82
PHF3-208ENST00000506783 AGGF1Q8N302 714 aaeCLIP9.91□□□□□ -0.826e-8■■■■■ 28.7
PHF3-208ENST00000506783 CCDC185Q8N715 623 aa9.91□□□□□ -0.82
PHF3-208ENST00000506783 COLGALT1Q8NBJ5 622 aa9.91□□□□□ -0.82
PHF3-208ENST00000506783 ICA1LQ8NDH6 482 aa9.91□□□□□ -0.82
PHF3-208ENST00000506783 PHF21BQ96EK2 531 aa9.91□□□□□ -0.82
PHF3-208ENST00000506783 RHOBTB2Q9BYZ6 727 aa9.91□□□□□ -0.82
PHF3-208ENST00000506783 NXF3Q9H4D5 531 aaKnown RBP9.91□□□□□ -0.82
PHF3-208ENST00000506783 TASP1Q9H6P5 420 aa9.91□□□□□ -0.82
PHF3-208ENST00000506783 AP4E1Q9UPM8 1137 aa9.91□□□□□ -0.82
PHF3-208ENST00000506783 COQ4Q9Y3A0 265 aa9.91□□□□□ -0.82
PHF3-208ENST00000506783 DOCK2Q92608 1830 aa9.9□□□□□ -0.82
PHF3-208ENST00000506783 GSC2O15499 205 aa9.9□□□□□ -0.82
PHF3-208ENST00000506783 PEX11AO75192 247 aa9.9□□□□□ -0.82
PHF3-208ENST00000506783 USP2O75604 605 aaPredicted RBP9.9□□□□□ -0.82
PHF3-208ENST00000506783 ENDOD1O94919 500 aa9.9□□□□□ -0.82
PHF3-208ENST00000506783 JCHAINP01591 159 aa9.9□□□□□ -0.82
PHF3-208ENST00000506783 PIRTP0C851 137 aa9.9□□□□□ -0.82
PHF3-208ENST00000506783 TPBGLP0DKB5 382 aa9.9□□□□□ -0.82
PHF3-208ENST00000506783 NCAM1P13591 858 aa9.9□□□□□ -0.82
PHF3-208ENST00000506783 HDCP19113 662 aa9.9□□□□□ -0.82
PHF3-208ENST00000506783 CA8P35219 290 aa9.9□□□□□ -0.82
PHF3-208ENST00000506783 ABL2P42684 1182 aa9.9□□□□□ -0.82
PHF3-208ENST00000506783 NUDT2P50583 147 aa9.9□□□□□ -0.82
PHF3-208ENST00000506783 FKBP1AP62942 108 aaKnown RBP9.9□□□□□ -0.82
PHF3-208ENST00000506783 COG7P83436 770 aa9.9□□□□□ -0.82
PHF3-208ENST00000506783 BEX3Q00994 111 aa9.9□□□□□ -0.82
PHF3-208ENST00000506783 SDHAF4Q5VUM1 108 aa9.9□□□□□ -0.82
PHF3-208ENST00000506783 XYLT1Q86Y38 959 aa9.9□□□□□ -0.82
PHF3-208ENST00000506783 GPR152Q8TDT2 470 aa9.9□□□□□ -0.82
PHF3-208ENST00000506783 CNBD2Q96M20 576 aa9.9□□□□□ -0.82
PHF3-208ENST00000506783 PCYT2Q99447 389 aa9.9□□□□□ -0.82
PHF3-208ENST00000506783 BTBD10Q9BSF8 475 aa9.9□□□□□ -0.82
PHF3-208ENST00000506783 STRA6Q9BX79 667 aa9.9□□□□□ -0.82
PHF3-208ENST00000506783 VCXQ9H320 206 aa9.9□□□□□ -0.82
PHF3-208ENST00000506783 ARHGEF3Q9NR81 526 aa9.9□□□□□ -0.82
PHF3-208ENST00000506783 C20orf96Q9NUD7 363 aaPredicted RBP9.9□□□□□ -0.82
PHF3-208ENST00000506783 DDX56Q9NY93 547 aaKnown RBP9.9□□□□□ -0.82
PHF3-208ENST00000506783 SCN9AQ15858 1988 aa9.9□□□□□ -0.82
PHF3-208ENST00000506783 BNIP3LO60238 219 aa9.9□□□□□ -0.82
PHF3-208ENST00000506783 SMNDC1O75940 238 aaKnown RBP eCLIP9.9□□□□□ -0.82
PHF3-208ENST00000506783 TRUB2O95900 331 aaKnown RBP9.9□□□□□ -0.82
PHF3-208ENST00000506783 NRF1Q16656 503 aa9.9□□□□□ -0.82
PHF3-208ENST00000506783 ARHGAP17Q68EM7 881 aa9.9□□□□□ -0.82
PHF3-208ENST00000506783 ZNF280DQ6N043 979 aa9.9□□□□□ -0.82
PHF3-208ENST00000506783 RIPOR1Q6ZS17 1223 aa9.9□□□□□ -0.82
PHF3-208ENST00000506783 UTS2BQ765I0 119 aa9.9□□□□□ -0.82
PHF3-208ENST00000506783 SLC26A11Q86WA9 606 aa9.9□□□□□ -0.82
PHF3-208ENST00000506783 C10orf107Q8IVU9 208 aa9.9□□□□□ -0.82
PHF3-208ENST00000506783 SLC4A11Q8NBS3 891 aa9.9□□□□□ -0.82
PHF3-208ENST00000506783 OR6P1Q8NGX9 317 aa9.9□□□□□ -0.82
PHF3-208ENST00000506783 SLC7A6OSQ96CW6 309 aaPredicted RBP9.9□□□□□ -0.82
PHF3-208ENST00000506783 MFSD3Q96ES6 412 aa9.9□□□□□ -0.82
PHF3-208ENST00000506783 CATSPER2Q96P56 530 aa9.9□□□□□ -0.82
PHF3-208ENST00000506783 EIF2AQ9BY44 585 aaKnown RBP9.9□□□□□ -0.82
PHF3-208ENST00000506783 NUP214P35658 2090 aaPredicted RBP9.9□□□□□ -0.83
PHF3-208ENST00000506783 SPATA31C2B4DYI2 1134 aa9.9□□□□□ -0.83
PHF3-208ENST00000506783 STX16-NPEPL1H3BU86 382 aa9.9□□□□□ -0.83
PHF3-208ENST00000506783 CACNA2D1P54289 1103 aa9.9□□□□□ -0.83
PHF3-208ENST00000506783 COL9A2Q14055 689 aaPredicted RBP9.9□□□□□ -0.83
PHF3-208ENST00000506783 UNC5AQ6ZN44 842 aa9.9□□□□□ -0.83
PHF3-208ENST00000506783 LCA5Q86VQ0 697 aa9.9□□□□□ -0.83
PHF3-208ENST00000506783 PHF13Q86YI8 300 aaPredicted RBP9.9□□□□□ -0.83
PHF3-208ENST00000506783 MYLK4Q86YV6 388 aaPredicted RBP9.9□□□□□ -0.83
PHF3-208ENST00000506783 SCUBE1Q8IWY4 988 aa9.9□□□□□ -0.83
PHF3-208ENST00000506783 DEFB106AQ8N104 65 aa9.9□□□□□ -0.83
PHF3-208ENST00000506783 PLD5Q8N7P1 536 aa9.9□□□□□ -0.83
PHF3-208ENST00000506783 DCBLD1Q8N8Z6 715 aa9.9□□□□□ -0.83
PHF3-208ENST00000506783 EIF1ADQ8N9N8 165 aaKnown RBP9.9□□□□□ -0.83
PHF3-208ENST00000506783 TTC13Q8NBP0 860 aa9.9□□□□□ -0.83
PHF3-208ENST00000506783 CEP70Q8NHQ1 597 aa9.9□□□□□ -0.83
PHF3-208ENST00000506783 PCDH19Q8TAB3 1148 aa9.9□□□□□ -0.83
PHF3-208ENST00000506783 CDKL2Q92772 493 aa9.9□□□□□ -0.83
PHF3-208ENST00000506783 LPPQ93052 612 aa9.9□□□□□ -0.83
PHF3-208ENST00000506783 C20orf27Q9GZN8 174 aa9.9□□□□□ -0.83
PHF3-208ENST00000506783 RNF39Q9H2S5 420 aa9.9□□□□□ -0.83
PHF3-208ENST00000506783 RSAD1Q9HA92 442 aa9.9□□□□□ -0.83
PHF3-208ENST00000506783 IARS2Q9NSE4 1012 aaKnown RBP9.9□□□□□ -0.83
PHF3-208ENST00000506783 CLIC5Q9NZA1 410 aa9.9□□□□□ -0.83
PHF3-208ENST00000506783 ANKRD36CQ5JPF3 1778 aa9.89□□□□□ -0.83
PHF3-208ENST00000506783 CASTOR2A6NHX0 329 aa9.89□□□□□ -0.83
PHF3-208ENST00000506783 XPO1O14980 1071 aaKnown RBP9.89□□□□□ -0.83
PHF3-208ENST00000506783 MSCO60682 206 aa9.89□□□□□ -0.83
PHF3-208ENST00000506783 ZWINTO95229 277 aa9.89□□□□□ -0.83
PHF3-208ENST00000506783 ITGBL1O95965 494 aaPredicted RBP9.89□□□□□ -0.83
PHF3-208ENST00000506783 GSTA1P08263 222 aa9.89□□□□□ -0.83
PHF3-208ENST00000506783 GSTA2P09210 222 aa9.89□□□□□ -0.83
PHF3-208ENST00000506783 HIC1Q14526 733 aa9.89□□□□□ -0.83
PHF3-208ENST00000506783 CERCAMQ5T4B2 595 aa9.89□□□□□ -0.83
PHF3-208ENST00000506783 LRRC74BQ6ZQY2 392 aa9.89□□□□□ -0.83
PHF3-208ENST00000506783 FASTKD5Q7L8L6 764 aaKnown RBP9.89□□□□□ -0.83
PHF3-208ENST00000506783 STRA8Q7Z7C7 330 aa9.89□□□□□ -0.83
PHF3-208ENST00000506783 ZNF677Q86XU0 584 aa9.89□□□□□ -0.83
PHF3-208ENST00000506783 WDR49Q8IV35 697 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms