RNA–Protein interactions for RNA: ENST00000506632.2

PDLIM5-209, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-209ENST00000506632 IGLV3-27P01718 113 aa9.48□□□□□ -0.89
PDLIM5-209ENST00000506632 LTFP02788 710 aa9.48□□□□□ -0.89
PDLIM5-209ENST00000506632 HMBSP08397 361 aa9.48□□□□□ -0.89
PDLIM5-209ENST00000506632 ZNF806P0C7X5 589 aa9.48□□□□□ -0.89
PDLIM5-209ENST00000506632 LCP1P13796 627 aa9.48□□□□□ -0.89
PDLIM5-209ENST00000506632 BCKDHBP21953 392 aa9.48□□□□□ -0.89
PDLIM5-209ENST00000506632 NTSR1P30989 418 aa9.48□□□□□ -0.89
PDLIM5-209ENST00000506632 P2RY2P41231 377 aa9.48□□□□□ -0.89
PDLIM5-209ENST00000506632 ATXN1P54253 815 aaKnown RBP9.48□□□□□ -0.89
PDLIM5-209ENST00000506632 MFAP3P55082 362 aa9.48□□□□□ -0.89
PDLIM5-209ENST00000506632 ELF2Q15723 593 aa9.48□□□□□ -0.89
PDLIM5-209ENST00000506632 DPCR1Q3MIW9 517 aa9.48□□□□□ -0.89
PDLIM5-209ENST00000506632 USP39Q53GS9 565 aaKnown RBP9.48□□□□□ -0.89
PDLIM5-209ENST00000506632 PMS2CLQ68D20 193 aa9.48□□□□□ -0.89
PDLIM5-209ENST00000506632 RNF43Q68DV7 783 aa9.48□□□□□ -0.89
PDLIM5-209ENST00000506632 C11orf74Q86VG3 221 aa9.48□□□□□ -0.89
PDLIM5-209ENST00000506632 DENND1CQ8IV53 801 aa9.48□□□□□ -0.89
PDLIM5-209ENST00000506632 FMNL3Q8IVF7 1028 aa9.48□□□□□ -0.89
PDLIM5-209ENST00000506632 NETO1Q8TDF5 533 aa9.48□□□□□ -0.89
PDLIM5-209ENST00000506632 CLEC4CQ8WTT0 213 aa9.48□□□□□ -0.89
PDLIM5-209ENST00000506632 STK32AQ8WU08 396 aa9.48□□□□□ -0.89
PDLIM5-209ENST00000506632 EDEM1Q92611 657 aa9.48□□□□□ -0.89
PDLIM5-209ENST00000506632 PIWIL1Q96J94 861 aaKnown RBP9.48□□□□□ -0.89
PDLIM5-209ENST00000506632 FAM81BQ96LP2 452 aa9.48□□□□□ -0.89
PDLIM5-209ENST00000506632 ACOX2Q99424 681 aa9.48□□□□□ -0.89
PDLIM5-209ENST00000506632 CRACR2AQ9BSW2 395 aa9.48□□□□□ -0.89
PDLIM5-209ENST00000506632 SLC4A5Q9BY07 1137 aa9.48□□□□□ -0.89
PDLIM5-209ENST00000506632 ARRDC1-AS1Q9H2J1 176 aa9.48□□□□□ -0.89
PDLIM5-209ENST00000506632 THAP9Q9H5L6 903 aa9.48□□□□□ -0.89
PDLIM5-209ENST00000506632 POLMQ9NP87 494 aaPredicted RBP9.48□□□□□ -0.89
PDLIM5-209ENST00000506632 UBE2TQ9NPD8 197 aaPredicted RBP9.48□□□□□ -0.89
PDLIM5-209ENST00000506632 LMBRD1Q9NUN5 540 aa9.48□□□□□ -0.89
PDLIM5-209ENST00000506632 SFMBT1Q9UHJ3 866 aa9.48□□□□□ -0.89
PDLIM5-209ENST00000506632 CLEC4EQ9ULY5 219 aa9.48□□□□□ -0.89
PDLIM5-209ENST00000506632 TCRBV21S2A2A0A5A6 115 aa9.47□□□□□ -0.89
PDLIM5-209ENST00000506632 BCLAF3A2AJT9 711 aaKnown RBP9.47□□□□□ -0.89
PDLIM5-209ENST00000506632 SLC30A4O14863 429 aa9.47□□□□□ -0.89
PDLIM5-209ENST00000506632 MSI1O43347 362 aaKnown RBP9.47□□□□□ -0.89
PDLIM5-209ENST00000506632 GDF9O60383 454 aa9.47□□□□□ -0.89
PDLIM5-209ENST00000506632 RHOBTB1O94844 696 aa9.47□□□□□ -0.89
PDLIM5-209ENST00000506632 FYNP06241 537 aa9.47□□□□□ -0.89
PDLIM5-209ENST00000506632 HOXB2P14652 356 aa9.47□□□□□ -0.89
PDLIM5-209ENST00000506632 GABRG2P18507 467 aa9.47□□□□□ -0.89
PDLIM5-209ENST00000506632 SLC9A1P19634 815 aa9.47□□□□□ -0.89
PDLIM5-209ENST00000506632 PON1P27169 355 aa9.47□□□□□ -0.89
PDLIM5-209ENST00000506632 HOXD9P28356 352 aaPredicted RBP9.47□□□□□ -0.89
PDLIM5-209ENST00000506632 ERCC5P28715 1186 aaPredicted RBP9.47□□□□□ -0.89
PDLIM5-209ENST00000506632 ANP32AP39687 249 aaKnown RBP9.47□□□□□ -0.89
PDLIM5-209ENST00000506632 MPLP40238 635 aa9.47□□□□□ -0.89
PDLIM5-209ENST00000506632 APBA1Q02410 837 aa9.47□□□□□ -0.89
PDLIM5-209ENST00000506632 ENPP2Q13822 863 aa9.47□□□□□ -0.89
PDLIM5-209ENST00000506632 SF3A2Q15428 464 aaKnown RBP9.47□□□□□ -0.89
PDLIM5-209ENST00000506632 EXOC3L4Q17RC7 722 aa9.47□□□□□ -0.89
PDLIM5-209ENST00000506632 GEN1Q17RS7 908 aa9.47□□□□□ -0.89
PDLIM5-209ENST00000506632 MAP7D1Q3KQU3 841 aa9.47□□□□□ -0.89
PDLIM5-209ENST00000506632 DPY19L2P1Q6NXN4 242 aa9.47□□□□□ -0.89
PDLIM5-209ENST00000506632 GJB7Q6PEY0 223 aa9.47□□□□□ -0.89
PDLIM5-209ENST00000506632 GBP6Q6ZN66 633 aa9.47□□□□□ -0.89
PDLIM5-209ENST00000506632 BEND5Q7L4P6 421 aa9.47□□□□□ -0.89
PDLIM5-209ENST00000506632 DGLUCYQ7Z3D6 616 aa9.47□□□□□ -0.89
PDLIM5-209ENST00000506632 RNF139Q8WU17 664 aa9.47□□□□□ -0.89
PDLIM5-209ENST00000506632 ZNF606Q8WXB4 792 aa9.47□□□□□ -0.89
PDLIM5-209ENST00000506632 SHC3Q92529 594 aa9.47□□□□□ -0.89
PDLIM5-209ENST00000506632 BHMTQ93088 406 aa9.47□□□□□ -0.89
PDLIM5-209ENST00000506632 RTKNQ9BST9 563 aa9.47□□□□□ -0.89
PDLIM5-209ENST00000506632 SLC2A11Q9BYW1 496 aa9.47□□□□□ -0.89
PDLIM5-209ENST00000506632 FAM117AQ9C073 453 aa9.47□□□□□ -0.89
PDLIM5-209ENST00000506632 NUP62CLQ9H1M0 184 aa9.47□□□□□ -0.89
PDLIM5-209ENST00000506632 SIX2Q9NPC8 291 aa9.47□□□□□ -0.89
PDLIM5-209ENST00000506632 ACP6Q9NPH0 428 aa9.47□□□□□ -0.89
PDLIM5-209ENST00000506632 APEX2Q9UBZ4 518 aa9.47□□□□□ -0.89
PDLIM5-209ENST00000506632 CYTH4Q9UIA0 394 aa9.47□□□□□ -0.89
PDLIM5-209ENST00000506632 CDV3Q9UKY7 258 aaKnown RBP9.47□□□□□ -0.89
PDLIM5-209ENST00000506632 INVSQ9Y283 1065 aa9.47□□□□□ -0.89
PDLIM5-209ENST00000506632 CNOT1A5YKK6 2376 aaKnown RBP9.47□□□□□ -0.89
PDLIM5-209ENST00000506632 NUP205Q92621 2012 aa9.47□□□□□ -0.89
PDLIM5-209ENST00000506632 THADAQ6YHU6 1953 aa9.46□□□□□ -0.89
PDLIM5-209ENST00000506632 PIK3R2O00459 728 aa9.46□□□□□ -0.9
PDLIM5-209ENST00000506632 NPC1O15118 1278 aa9.46□□□□□ -0.9
PDLIM5-209ENST00000506632 PAPSS1O43252 624 aaPredicted RBP9.46□□□□□ -0.9
PDLIM5-209ENST00000506632 SART1O43290 800 aaKnown RBP9.46□□□□□ -0.9
PDLIM5-209ENST00000506632 LETM1O95202 739 aaPredicted RBP9.46□□□□□ -0.9
PDLIM5-209ENST00000506632 KRT5P13647 590 aa9.46□□□□□ -0.9
PDLIM5-209ENST00000506632 GNA15P30679 374 aa9.46□□□□□ -0.9
PDLIM5-209ENST00000506632 GBP1P32455 592 aa9.46□□□□□ -0.9
PDLIM5-209ENST00000506632 WASP42768 502 aa9.46□□□□□ -0.9
PDLIM5-209ENST00000506632 ACADSBP45954 432 aa9.46□□□□□ -0.9
PDLIM5-209ENST00000506632 HARS2P49590 506 aaKnown RBP9.46□□□□□ -0.9
PDLIM5-209ENST00000506632 LIMK1P53667 647 aa9.46□□□□□ -0.9
PDLIM5-209ENST00000506632 ZNF445P59923 1031 aa9.46□□□□□ -0.9
PDLIM5-209ENST00000506632 RING1Q06587 406 aa9.46□□□□□ -0.9
PDLIM5-209ENST00000506632 NNTQ13423 1086 aa9.46□□□□□ -0.9
PDLIM5-209ENST00000506632 CCDC6Q16204 474 aa9.46□□□□□ -0.9
PDLIM5-209ENST00000506632 MAN2A1Q16706 1144 aa9.46□□□□□ -0.9
PDLIM5-209ENST00000506632 CT47A1Q5JQC4 288 aaPredicted RBP9.46□□□□□ -0.9
PDLIM5-209ENST00000506632 MIIPQ5JXC2 388 aa9.46□□□□□ -0.9
PDLIM5-209ENST00000506632 ADGRF1Q5T601 910 aa9.46□□□□□ -0.9
PDLIM5-209ENST00000506632 TMEM215Q68D42 235 aa9.46□□□□□ -0.9
PDLIM5-209ENST00000506632 KIAA1211LQ6NV74 962 aa9.46□□□□□ -0.9
PDLIM5-209ENST00000506632 DENND1BQ6P3S1 775 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms