RNA–Protein interactions for RNA: ENST00000506098.5

NUP54-204, Transcript of nucleoporin 54, humanhuman

TSL 4

Gene NUP54, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-204ENST00000506098 TAS2R40P59535 323 aa7.49□□□□□ -1.21
NUP54-204ENST00000506098 SLC7A9P82251 487 aa7.49□□□□□ -1.21
NUP54-204ENST00000506098 COG7P83436 770 aa7.49□□□□□ -1.21
NUP54-204ENST00000506098 SCAPQ12770 1279 aa7.49□□□□□ -1.21
NUP54-204ENST00000506098 MTA1Q13330 715 aa7.49□□□□□ -1.21
NUP54-204ENST00000506098 HADHQ16836 314 aaKnown RBP7.49□□□□□ -1.21
NUP54-204ENST00000506098 CDO1Q16878 200 aa7.49□□□□□ -1.21
NUP54-204ENST00000506098 SLC5A9Q2M3M2 681 aa7.49□□□□□ -1.21
NUP54-204ENST00000506098 RAB6CQ53S08 254 aa7.49□□□□□ -1.21
NUP54-204ENST00000506098 BOLA3Q53S33 107 aa7.49□□□□□ -1.21
NUP54-204ENST00000506098 C10orf120Q5SQS8 335 aa7.49□□□□□ -1.21
NUP54-204ENST00000506098 RARS2Q5T160 578 aaKnown RBP7.49□□□□□ -1.21
NUP54-204ENST00000506098 ERMARDQ5T6L9 678 aa7.49□□□□□ -1.21
NUP54-204ENST00000506098 ACBD5Q5T8D3 534 aaPredicted RBP7.49□□□□□ -1.21
NUP54-204ENST00000506098 PAPD7Q5XG87 772 aaKnown RBP7.49□□□□□ -1.21
NUP54-204ENST00000506098 TMC5Q6UXY8 1006 aa7.49□□□□□ -1.21
NUP54-204ENST00000506098 PDZD4Q76G19 769 aaPredicted RBP7.49□□□□□ -1.21
NUP54-204ENST00000506098 RSRC2Q7L4I2 434 aaKnown RBP7.49□□□□□ -1.21
NUP54-204ENST00000506098 TAC4Q86UU9 113 aa7.49□□□□□ -1.21
NUP54-204ENST00000506098 VSIG1Q86XK7 387 aa7.49□□□□□ -1.21
NUP54-204ENST00000506098 RHOT1Q8IXI2 618 aa7.49□□□□□ -1.21
NUP54-204ENST00000506098 MICALL1Q8N3F8 863 aa7.49□□□□□ -1.21
NUP54-204ENST00000506098 C12orf76Q8N812 135 aaPredicted RBP7.49□□□□□ -1.21
NUP54-204ENST00000506098 FAM71BQ8TC56 605 aa7.49□□□□□ -1.21
NUP54-204ENST00000506098 AZIN2Q96A70 460 aa7.49□□□□□ -1.21
NUP54-204ENST00000506098 TCEAL4Q96EI5 215 aa7.49□□□□□ -1.21
NUP54-204ENST00000506098 ZFRQ96KR1 1074 aaKnown RBP7.49□□□□□ -1.21
NUP54-204ENST00000506098 FCRL2Q96LA5 508 aaPredicted RBP7.49□□□□□ -1.21
NUP54-204ENST00000506098 C16orf45Q96MC5 204 aaPredicted RBP7.49□□□□□ -1.21
NUP54-204ENST00000506098 GCNAQ96QF7 691 aa7.49□□□□□ -1.21
NUP54-204ENST00000506098 PEBP4Q96S96 227 aa7.49□□□□□ -1.21
NUP54-204ENST00000506098 CDX2Q99626 313 aaPredicted RBP7.49□□□□□ -1.21
NUP54-204ENST00000506098 KLF16Q9BXK1 252 aaPredicted RBP7.49□□□□□ -1.21
NUP54-204ENST00000506098 SLC46A2Q9BY10 475 aa7.49□□□□□ -1.21
NUP54-204ENST00000506098 RAB6CQ9H0N0 254 aa7.49□□□□□ -1.21
NUP54-204ENST00000506098 ATXN3LQ9H3M9 355 aa7.49□□□□□ -1.21
NUP54-204ENST00000506098 TASP1Q9H6P5 420 aa7.49□□□□□ -1.21
NUP54-204ENST00000506098 WDCPQ9H6R7 721 aa7.49□□□□□ -1.21
NUP54-204ENST00000506098 PIDD1Q9HB75 910 aa7.49□□□□□ -1.21
NUP54-204ENST00000506098 PIGVQ9NUD9 493 aa7.49□□□□□ -1.21
NUP54-204ENST00000506098 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.49□□□□□ -1.21
NUP54-204ENST00000506098 DDIT4Q9NX09 232 aa7.49□□□□□ -1.21
NUP54-204ENST00000506098 ARHGEF38Q9NXL2 777 aa7.49□□□□□ -1.21
NUP54-204ENST00000506098 DDX56Q9NY93 547 aaKnown RBP7.49□□□□□ -1.21
NUP54-204ENST00000506098 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.49□□□□□ -1.21
NUP54-204ENST00000506098 MARCH2Q9P0N8 246 aa7.49□□□□□ -1.21
NUP54-204ENST00000506098 SFMBT1Q9UHJ3 866 aa7.49□□□□□ -1.21
NUP54-204ENST00000506098 NUDT5Q9UKK9 219 aa7.49□□□□□ -1.21
NUP54-204ENST00000506098 FZD10Q9ULW2 581 aa7.49□□□□□ -1.21
NUP54-204ENST00000506098 COL4A3Q01955 1670 aa7.48□□□□□ -1.21
NUP54-204ENST00000506098 CTAGE9A4FU28 777 aa7.48□□□□□ -1.21
NUP54-204ENST00000506098 KCNU1A8MYU2 1149 aa7.48□□□□□ -1.21
NUP54-204ENST00000506098 CES2O00748 559 aa7.48□□□□□ -1.21
NUP54-204ENST00000506098 PRPSAP2O60256 369 aa7.48□□□□□ -1.21
NUP54-204ENST00000506098 ATP1A1P05023 1023 aaKnown RBP7.48□□□□□ -1.21
NUP54-204ENST00000506098 SLC2A3P11169 496 aa7.48□□□□□ -1.21
NUP54-204ENST00000506098 TNNT1P13805 278 aa7.48□□□□□ -1.21
NUP54-204ENST00000506098 HDCP19113 662 aa7.48□□□□□ -1.21
NUP54-204ENST00000506098 IGFBP4P22692 258 aa7.48□□□□□ -1.21
NUP54-204ENST00000506098 CASQ1P31415 396 aa7.48□□□□□ -1.21
NUP54-204ENST00000506098 CCR1P32246 355 aa7.48□□□□□ -1.21
NUP54-204ENST00000506098 ADRA1BP35368 520 aa7.48□□□□□ -1.21
NUP54-204ENST00000506098 ARSEP51690 589 aa7.48□□□□□ -1.21
NUP54-204ENST00000506098 ATXN1P54253 815 aaKnown RBP7.48□□□□□ -1.21
NUP54-204ENST00000506098 TBX4P57082 545 aa7.48□□□□□ -1.21
NUP54-204ENST00000506098 NTHL1P78549 312 aa7.48□□□□□ -1.21
NUP54-204ENST00000506098 CYP4F8P98187 520 aa7.48□□□□□ -1.21
NUP54-204ENST00000506098 AMPD2Q01433 879 aa7.48□□□□□ -1.21
NUP54-204ENST00000506098 NRG1Q02297 640 aaPredicted RBP7.48□□□□□ -1.21
NUP54-204ENST00000506098 DLX2Q07687 328 aaPredicted RBP7.48□□□□□ -1.21
NUP54-204ENST00000506098 EFEMP1Q12805 493 aa7.48□□□□□ -1.21
NUP54-204ENST00000506098 NME3Q13232 169 aa7.48□□□□□ -1.21
NUP54-204ENST00000506098 RPS6KA1Q15418 735 aa7.48□□□□□ -1.21
NUP54-204ENST00000506098 TEAD2Q15562 447 aa7.48□□□□□ -1.21
NUP54-204ENST00000506098 ARHGAP15Q53QZ3 475 aa7.48□□□□□ -1.21
NUP54-204ENST00000506098 GPR158Q5T848 1215 aa7.48□□□□□ -1.21
NUP54-204ENST00000506098 DAB2IPQ5VWQ8 1189 aa7.48□□□□□ -1.21
NUP54-204ENST00000506098 TXNDC8Q6A555 127 aa7.48□□□□□ -1.21
NUP54-204ENST00000506098 TXNRD3NBQ6F5E7 133 aa7.48□□□□□ -1.21
NUP54-204ENST00000506098 CES5AQ6NT32 575 aa7.48□□□□□ -1.21
NUP54-204ENST00000506098 POTEHQ6S545 545 aa7.48□□□□□ -1.21
NUP54-204ENST00000506098 SYT10Q6XYQ8 523 aa7.48□□□□□ -1.21
NUP54-204ENST00000506098 SND1Q7KZF4 910 aaKnown RBP eCLIP7.48□□□□□ -1.21
NUP54-204ENST00000506098 UNC45BQ8IWX7 931 aa7.48□□□□□ -1.21
NUP54-204ENST00000506098 KATNAL2Q8IYT4 538 aa7.48□□□□□ -1.21
NUP54-204ENST00000506098 CMTM8Q8IZV2 173 aa7.48□□□□□ -1.21
NUP54-204ENST00000506098 OTUD6BQ8N6M0 293 aa7.48□□□□□ -1.21
NUP54-204ENST00000506098 UBL4BQ8N7F7 174 aa7.48□□□□□ -1.21
NUP54-204ENST00000506098 KIAA1958Q8N8K9 716 aa7.48□□□□□ -1.21
NUP54-204ENST00000506098 ARL14EPQ8N8R7 260 aaPredicted RBP7.48□□□□□ -1.21
NUP54-204ENST00000506098 MAB21L3Q8N8X9 362 aa7.48□□□□□ -1.21
NUP54-204ENST00000506098 SMRP1Q8NCR6 262 aa7.48□□□□□ -1.21
NUP54-204ENST00000506098 ADAM32Q8TC27 787 aa7.48□□□□□ -1.21
NUP54-204ENST00000506098 ADAMTS19Q8TE59 1207 aa7.48□□□□□ -1.21
NUP54-204ENST00000506098 PLD4Q96BZ4 506 aa7.48□□□□□ -1.21
NUP54-204ENST00000506098 FAM161BQ96MY7 647 aa7.48□□□□□ -1.21
NUP54-204ENST00000506098 GUCD1Q96NT3 240 aa7.48□□□□□ -1.21
NUP54-204ENST00000506098 SLC22A12Q96S37 553 aa7.48□□□□□ -1.21
NUP54-204ENST00000506098 HAPLN3Q96S86 360 aa7.48□□□□□ -1.21
NUP54-204ENST00000506098 CYP2S1Q96SQ9 504 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms