RNA–Protein interactions for RNA: ENST00000505615.1

VCAN-206, Transcript of versican, humanhuman

TSL 5

Gene VCAN, Length 810 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-206ENST00000505615 GATA4P43694 442 aa7.45□□□□□ -1.22
VCAN-206ENST00000505615 ACADVLP49748 655 aa7.45□□□□□ -1.22
VCAN-206ENST00000505615 CCT8P50990 548 aa7.45□□□□□ -1.22
VCAN-206ENST00000505615 GDF10P55107 478 aa7.45□□□□□ -1.22
VCAN-206ENST00000505615 GAD2Q05329 585 aa7.45□□□□□ -1.22
VCAN-206ENST00000505615 STRN3Q13033 797 aa7.45□□□□□ -1.22
VCAN-206ENST00000505615 SF3A1Q15459 793 aaKnown RBP7.45□□□□□ -1.22
VCAN-206ENST00000505615 KCNT1Q5JUK3 1230 aa7.45□□□□□ -1.22
VCAN-206ENST00000505615 NKAPLQ5M9Q1 402 aa7.45□□□□□ -1.22
VCAN-206ENST00000505615 HAUS3Q68CZ6 603 aa7.45□□□□□ -1.22
VCAN-206ENST00000505615 RINT1Q6NUQ1 792 aa7.45□□□□□ -1.22
VCAN-206ENST00000505615 CPLX2Q6PUV4 134 aaKnown RBP7.45□□□□□ -1.22
VCAN-206ENST00000505615 LAYNQ6UX15 382 aa7.45□□□□□ -1.22
VCAN-206ENST00000505615 USP49Q70CQ1 688 aa7.45□□□□□ -1.22
VCAN-206ENST00000505615 KCNK18Q7Z418 384 aa7.45□□□□□ -1.22
VCAN-206ENST00000505615 OSTM1Q86WC4 334 aa7.45□□□□□ -1.22
VCAN-206ENST00000505615 CHPFQ8IZ52 775 aa7.45□□□□□ -1.22
VCAN-206ENST00000505615 ERMNQ8TAM6 284 aa7.45□□□□□ -1.22
VCAN-206ENST00000505615 KCNN1Q92952 543 aa7.45□□□□□ -1.22
VCAN-206ENST00000505615 GLMNQ92990 594 aa7.45□□□□□ -1.22
VCAN-206ENST00000505615 IGSF8Q969P0 613 aa7.45□□□□□ -1.22
VCAN-206ENST00000505615 MED8Q96G25 268 aa7.45□□□□□ -1.22
VCAN-206ENST00000505615 FUBP3Q96I24 572 aaKnown RBP eCLIP7.45□□□□□ -1.22
VCAN-206ENST00000505615 SPATA17Q96L03 361 aa7.45□□□□□ -1.22
VCAN-206ENST00000505615 DRC1Q96MC2 740 aa7.45□□□□□ -1.22
VCAN-206ENST00000505615 ACBD6Q9BR61 282 aa7.45□□□□□ -1.22
VCAN-206ENST00000505615 TTLL2Q9BWV7 592 aa7.45□□□□□ -1.22
VCAN-206ENST00000505615 TRIM9Q9C026 710 aa7.45□□□□□ -1.22
VCAN-206ENST00000505615 C17orf75Q9HAS0 396 aa7.45□□□□□ -1.22
VCAN-206ENST00000505615 DDX19AQ9NUU7 478 aaKnown RBP7.45□□□□□ -1.22
VCAN-206ENST00000505615 ANKMY1Q9P2S6 941 aa7.45□□□□□ -1.22
VCAN-206ENST00000505615 DEC1Q9P2X7 70 aa7.45□□□□□ -1.22
VCAN-206ENST00000505615 CPSF3Q9UKF6 684 aaKnown RBP7.45□□□□□ -1.22
VCAN-206ENST00000505615 KIAA1024Q9UPX6 916 aa7.45□□□□□ -1.22
VCAN-206ENST00000505615 ANKRD6Q9Y2G4 727 aa7.45□□□□□ -1.22
VCAN-206ENST00000505615 DERAQ9Y315 318 aa7.45□□□□□ -1.22
VCAN-206ENST00000505615 ITPR3Q14573 2671 aa7.45□□□□□ -1.22
VCAN-206ENST00000505615 POLQO75417 2590 aa7.44□□□□□ -1.22
VCAN-206ENST00000505615 TDRD6O60522 2096 aaKnown RBP7.44□□□□□ -1.22
VCAN-206ENST00000505615 KPNA7A9QM74 516 aa7.44□□□□□ -1.22
VCAN-206ENST00000505615 WASH3PC4AMC7 463 aa7.44□□□□□ -1.22
VCAN-206ENST00000505615 E9PMD0 336 aa7.44□□□□□ -1.22
VCAN-206ENST00000505615 KCNK3O14649 394 aa7.44□□□□□ -1.22
VCAN-206ENST00000505615 ENC1O14682 589 aa7.44□□□□□ -1.22
VCAN-206ENST00000505615 EFSO43281 561 aa7.44□□□□□ -1.22
VCAN-206ENST00000505615 PIGRP01833 764 aa7.44□□□□□ -1.22
VCAN-206ENST00000505615 OR52Z1P0C646 297 aa7.44□□□□□ -1.22
VCAN-206ENST00000505615 FDPSP14324 419 aaKnown RBP7.44□□□□□ -1.22
VCAN-206ENST00000505615 ADSSP30520 456 aa7.44□□□□□ -1.22
VCAN-206ENST00000505615 MCM7P33993 719 aa7.44□□□□□ -1.22
VCAN-206ENST00000505615 ACTN2P35609 894 aa7.44□□□□□ -1.22
VCAN-206ENST00000505615 MATR3P43243 847 aaKnown RBP eCLIP7.44□□□□□ -1.22
VCAN-206ENST00000505615 GRIA4P48058 902 aa7.44□□□□□ -1.22
VCAN-206ENST00000505615 AFF3P51826 1226 aaKnown RBP7.44□□□□□ -1.22
VCAN-206ENST00000505615 TMPRSS3P57727 454 aa7.44□□□□□ -1.22
VCAN-206ENST00000505615 IL9RQ01113 521 aa7.44□□□□□ -1.22
VCAN-206ENST00000505615 DNAJC3Q13217 504 aa7.44□□□□□ -1.22
VCAN-206ENST00000505615 KYAT1Q16773 422 aa7.44□□□□□ -1.22
VCAN-206ENST00000505615 FUT11Q495W5 492 aa7.44□□□□□ -1.22
VCAN-206ENST00000505615 BMP2KLQ5H9B9 411 aa7.44□□□□□ -1.22
VCAN-206ENST00000505615 SAMD5Q5TGI4 173 aa7.44□□□□□ -1.22
VCAN-206ENST00000505615 GRAMD4Q6IC98 578 aa7.44□□□□□ -1.22
VCAN-206ENST00000505615 SLC39A4Q6P5W5 647 aa7.44□□□□□ -1.22
VCAN-206ENST00000505615 RUFY3Q7L099 469 aa7.44□□□□□ -1.22
VCAN-206ENST00000505615 TMEM25Q86YD3 366 aa7.44□□□□□ -1.22
VCAN-206ENST00000505615 SCN4BQ8IWT1 228 aa7.44□□□□□ -1.22
VCAN-206ENST00000505615 BBS7Q8IWZ6 715 aa7.44□□□□□ -1.22
VCAN-206ENST00000505615 CD302Q8IX05 232 aa7.44□□□□□ -1.22
VCAN-206ENST00000505615 WBP2Q969T9 261 aa7.44□□□□□ -1.22
VCAN-206ENST00000505615 HIC2Q96JB3 615 aa7.44□□□□□ -1.22
VCAN-206ENST00000505615 LGMNQ99538 433 aa7.44□□□□□ -1.22
VCAN-206ENST00000505615 DUSP9Q99956 384 aaKnown RBP7.44□□□□□ -1.22
VCAN-206ENST00000505615 MKRN2Q9H000 416 aaKnown RBP7.44□□□□□ -1.22
VCAN-206ENST00000505615 ITM2CQ9NQX7 267 aa7.44□□□□□ -1.22
VCAN-206ENST00000505615 DDX43Q9NXZ2 648 aaKnown RBP7.44□□□□□ -1.22
VCAN-206ENST00000505615 ZDHHC3Q9NYG2 299 aa7.44□□□□□ -1.22
VCAN-206ENST00000505615 TRPM5Q9NZQ8 1165 aa7.44□□□□□ -1.22
VCAN-206ENST00000505615 TBC1D14Q9P2M4 693 aa7.44□□□□□ -1.22
VCAN-206ENST00000505615 ORC3Q9UBD5 711 aaPredicted RBP7.44□□□□□ -1.22
VCAN-206ENST00000505615 GTF3C4Q9UKN8 822 aa7.44□□□□□ -1.22
VCAN-206ENST00000505615 C2CD2Q9Y426 696 aa7.44□□□□□ -1.22
VCAN-206ENST00000505615 COL27A1Q8IZC6 1860 aaPredicted RBP7.44□□□□□ -1.22
VCAN-206ENST00000505615 RP1P56715 2156 aa7.43□□□□□ -1.22
VCAN-206ENST00000505615 A0A0B4J269 797 aa7.43□□□□□ -1.22
VCAN-206ENST00000505615 GFRA2O00451 464 aa7.43□□□□□ -1.22
VCAN-206ENST00000505615 CACNG3O60359 315 aa7.43□□□□□ -1.22
VCAN-206ENST00000505615 CDKL5O76039 1030 aa7.43□□□□□ -1.22
VCAN-206ENST00000505615 C1SP09871 688 aa7.43□□□□□ -1.22
VCAN-206ENST00000505615 GP1BBP13224 206 aa7.43□□□□□ -1.22
VCAN-206ENST00000505615 PLS3P13797 630 aa7.43□□□□□ -1.22
VCAN-206ENST00000505615 GUCY2CP25092 1073 aa7.43□□□□□ -1.22
VCAN-206ENST00000505615 PSMA5P28066 241 aa7.43□□□□□ -1.22
VCAN-206ENST00000505615 GRIK1P39086 918 aa7.43□□□□□ -1.22
VCAN-206ENST00000505615 CTSKP43235 329 aa7.43□□□□□ -1.22
VCAN-206ENST00000505615 TPMTP51580 245 aa7.43□□□□□ -1.22
VCAN-206ENST00000505615 SMTNP53814 917 aa7.43□□□□□ -1.22
VCAN-206ENST00000505615 UCNP55089 124 aa7.43□□□□□ -1.22
VCAN-206ENST00000505615 NCKAP1LP55160 1127 aa7.43□□□□□ -1.22
VCAN-206ENST00000505615 SV2CQ496J9 727 aa7.43□□□□□ -1.22
VCAN-206ENST00000505615 BTBD8Q5XKL5 378 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms