RNA–Protein interactions for RNA: ENST00000505450.5

PROM1-206, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PROM1, Length 4,349 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-206ENST00000505450 ACAD11Q709F0 780 aa8.24□□□□□ -1.09
PROM1-206ENST00000505450 PHF13Q86YI8 300 aaPredicted RBP8.24□□□□□ -1.09
PROM1-206ENST00000505450 SIAH1Q8IUQ4 282 aa8.24□□□□□ -1.09
PROM1-206ENST00000505450 C12orf56Q8IXR9 622 aa8.24□□□□□ -1.09
PROM1-206ENST00000505450 RNF103-CHMP3A0A140T963 221 aa8.24□□□□□ -1.09
PROM1-206ENST00000505450 DLDP09622 509 aaKnown RBP8.24□□□□□ -1.09
PROM1-206ENST00000505450 SERPINB9P50453 376 aa8.24□□□□□ -1.09
PROM1-206ENST00000505450 JAG1P78504 1218 aa8.24□□□□□ -1.09
PROM1-206ENST00000505450 PRKD1Q15139 912 aaPredicted RBP8.24□□□□□ -1.09
PROM1-206ENST00000505450 C15orf59Q2T9L4 293 aaPredicted RBP8.24□□□□□ -1.09
PROM1-206ENST00000505450 C11orf91Q3C1V1 193 aa8.24□□□□□ -1.09
PROM1-206ENST00000505450 SFT2D3Q587I9 215 aa8.24□□□□□ -1.09
PROM1-206ENST00000505450 TRIM67Q6ZTA4 783 aa8.24□□□□□ -1.09
PROM1-206ENST00000505450 CDHR3Q6ZTQ4 885 aa8.24□□□□□ -1.09
PROM1-206ENST00000505450 PID1Q7Z2X4 250 aa8.24□□□□□ -1.09
PROM1-206ENST00000505450 SESTD1Q86VW0 696 aa8.24□□□□□ -1.09
PROM1-206ENST00000505450 IGDCC3Q8IVU1 814 aa8.24□□□□□ -1.09
PROM1-206ENST00000505450 ZNF516Q92618 1163 aa8.24□□□□□ -1.09
PROM1-206ENST00000505450 NKD2Q969F2 451 aaPredicted RBP8.24□□□□□ -1.09
PROM1-206ENST00000505450 THAP11Q96EK4 314 aa8.24□□□□□ -1.09
PROM1-206ENST00000505450 SGF29Q96ES7 293 aa8.24□□□□□ -1.09
PROM1-206ENST00000505450 MFSD14AQ96MC6 490 aa8.24□□□□□ -1.09
PROM1-206ENST00000505450 SENP6Q9GZR1 1112 aaPredicted RBP8.24□□□□□ -1.09
PROM1-206ENST00000505450 SEMA6AQ9H2E6 1030 aa8.24□□□□□ -1.09
PROM1-206ENST00000505450 RPF1Q9H9Y2 349 aaKnown RBP8.24□□□□□ -1.09
PROM1-206ENST00000505450 APOBEC3GQ9HC16 384 aaKnown RBP8.24□□□□□ -1.09
PROM1-206ENST00000505450 FAM49BQ9NUQ9 324 aa8.24□□□□□ -1.09
PROM1-206ENST00000505450 PLLPQ9Y342 182 aa8.24□□□□□ -1.09
PROM1-206ENST00000505450 F8W8V4 182 aa8.23□□□□□ -1.09
PROM1-206ENST00000505450 PQBP1O60828 265 aaKnown RBP8.23□□□□□ -1.09
PROM1-206ENST00000505450 APOEP02649 317 aa8.23□□□□□ -1.09
PROM1-206ENST00000505450 P4HA1P13674 534 aa8.23□□□□□ -1.09
PROM1-206ENST00000505450 RGS2P41220 211 aa8.23□□□□□ -1.09
PROM1-206ENST00000505450 TBCCQ15814 346 aa8.23□□□□□ -1.09
PROM1-206ENST00000505450 SLC44A4Q53GD3 710 aa8.23□□□□□ -1.09
PROM1-206ENST00000505450 DACT2Q5SW24 774 aa8.23□□□□□ -1.09
PROM1-206ENST00000505450 B3GNT6Q6ZMB0 384 aa8.23□□□□□ -1.09
PROM1-206ENST00000505450 BBS12Q6ZW61 710 aa8.23□□□□□ -1.09
PROM1-206ENST00000505450 SH3BP5LQ7L8J4 393 aa8.23□□□□□ -1.09
PROM1-206ENST00000505450 SNX32Q86XE0 403 aa8.23□□□□□ -1.09
PROM1-206ENST00000505450 ABI1Q8IZP0 508 aa8.23□□□□□ -1.09
PROM1-206ENST00000505450 LRRC71Q8N4P6 559 aa8.23□□□□□ -1.09
PROM1-206ENST00000505450 ZFAND2BQ8WV99 257 aa8.23□□□□□ -1.09
PROM1-206ENST00000505450 DCAKDQ8WVC6 231 aa8.23□□□□□ -1.09
PROM1-206ENST00000505450 RXFP2Q8WXD0 754 aa8.23□□□□□ -1.09
PROM1-206ENST00000505450 GLT1D1Q96MS3 346 aa8.23□□□□□ -1.09
PROM1-206ENST00000505450 SLC38A10Q9HBR0 1119 aa8.23□□□□□ -1.09
PROM1-206ENST00000505450 ZNF302Q9NR11 478 aa8.23□□□□□ -1.09
PROM1-206ENST00000505450 TJP2Q9UDY2 1190 aa8.23□□□□□ -1.09
PROM1-206ENST00000505450 POLIQ9UNA4 740 aa8.23□□□□□ -1.09
PROM1-206ENST00000505450 APOC4-APOC2K7ER74 178 aa8.23□□□□□ -1.09
PROM1-206ENST00000505450 TRAFD1O14545 582 aaPredicted RBP8.23□□□□□ -1.09
PROM1-206ENST00000505450 DYNC1LI2O43237 492 aaPredicted RBP8.23□□□□□ -1.09
PROM1-206ENST00000505450 CST3P01034 146 aaPredicted RBP8.23□□□□□ -1.09
PROM1-206ENST00000505450 APOC2P02655 101 aa8.23□□□□□ -1.09
PROM1-206ENST00000505450 GCAP28676 217 aa8.23□□□□□ -1.09
PROM1-206ENST00000505450 GLRBP48167 497 aa8.23□□□□□ -1.09
PROM1-206ENST00000505450 ACTR2P61160 394 aa8.23□□□□□ -1.09
PROM1-206ENST00000505450 PHEXP78562 749 aa8.23□□□□□ -1.09
PROM1-206ENST00000505450 RPS6KA2Q15349 733 aa8.23□□□□□ -1.09
PROM1-206ENST00000505450 XKR3Q5GH77 459 aa8.23□□□□□ -1.09
PROM1-206ENST00000505450 RNF135Q8IUD6 432 aa8.23□□□□□ -1.09
PROM1-206ENST00000505450 SIKE1Q9BRV8 207 aa8.23□□□□□ -1.09
PROM1-206ENST00000505450 COL20A1Q9P218 1284 aa8.23□□□□□ -1.09
PROM1-206ENST00000505450 KLHL8Q9P2G9 620 aaPredicted RBP8.23□□□□□ -1.09
PROM1-206ENST00000505450 AURKCQ9UQB9 309 aa8.23□□□□□ -1.09
PROM1-206ENST00000505450 COQ4Q9Y3A0 265 aa8.23□□□□□ -1.09
PROM1-206ENST00000505450 MYOCOSA0A1B0GUC4 107 aa8.23□□□□□ -1.09
PROM1-206ENST00000505450 CXorf49A8MYA2 514 aaPredicted RBP8.23□□□□□ -1.09
PROM1-206ENST00000505450 CYP1A1P04798 512 aaPredicted RBP8.23□□□□□ -1.09
PROM1-206ENST00000505450 SERPINA6P08185 405 aa8.23□□□□□ -1.09
PROM1-206ENST00000505450 FGFR3P22607 806 aa8.23□□□□□ -1.09
PROM1-206ENST00000505450 RPL5P46777 297 aaKnown RBP8.23□□□□□ -1.09
PROM1-206ENST00000505450 OGDHQ02218 1023 aa8.23□□□□□ -1.09
PROM1-206ENST00000505450 POU5F1BQ06416 359 aa8.23□□□□□ -1.09
PROM1-206ENST00000505450 C16orf72Q14CZ0 275 aa8.23□□□□□ -1.09
PROM1-206ENST00000505450 TRMT10BQ6PF06 316 aaKnown RBP8.23□□□□□ -1.09
PROM1-206ENST00000505450 C15orf52Q6ZUT6 534 aaKnown RBP8.23□□□□□ -1.09
PROM1-206ENST00000505450 CTU1Q7Z7A3 348 aaKnown RBP8.23□□□□□ -1.09
PROM1-206ENST00000505450 TRIM74Q86UV6 250 aa8.23□□□□□ -1.09
PROM1-206ENST00000505450 TRIM73Q86UV7 250 aa8.23□□□□□ -1.09
PROM1-206ENST00000505450 ZNF354CQ86Y25 554 aa8.23□□□□□ -1.09
PROM1-206ENST00000505450 DGCR14Q96DF8 476 aaKnown RBP8.23□□□□□ -1.09
PROM1-206ENST00000505450 PTCD3Q96EY7 689 aaKnown RBP8.23□□□□□ -1.09
PROM1-206ENST00000505450 PDCD2LQ9BRP1 358 aa8.23□□□□□ -1.09
PROM1-206ENST00000505450 EFHD1Q9BUP0 239 aa8.23□□□□□ -1.09
PROM1-206ENST00000505450 FAM96AQ9H5X1 160 aa8.23□□□□□ -1.09
PROM1-206ENST00000505450 SSX2IPQ9Y2D8 614 aa8.23□□□□□ -1.09
PROM1-206ENST00000505450 HBS1LQ9Y450 684 aaKnown RBP8.23□□□□□ -1.09
PROM1-206ENST00000505450 WDR27A2RRH5 827 aa8.22□□□□□ -1.09
PROM1-206ENST00000505450 KPNA7A9QM74 516 aa8.22□□□□□ -1.09
PROM1-206ENST00000505450 SMAPO00193 183 aa8.22□□□□□ -1.09
PROM1-206ENST00000505450 TGDSO95455 350 aa8.22□□□□□ -1.09
PROM1-206ENST00000505450 MT-CO1P00395 513 aa8.22□□□□□ -1.09
PROM1-206ENST00000505450 EGFRP00533 1210 aa8.22□□□□□ -1.09
PROM1-206ENST00000505450 HMGCRP04035 888 aa8.22□□□□□ -1.09
PROM1-206ENST00000505450 CPA3P15088 417 aa8.22□□□□□ -1.09
PROM1-206ENST00000505450 PSMC3P17980 439 aa8.22□□□□□ -1.09
PROM1-206ENST00000505450 PTP4A2Q12974 167 aa8.22□□□□□ -1.09
PROM1-206ENST00000505450 PRPSAP1Q14558 356 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms