RNA–Protein interactions for RNA: ENST00000505207.5

UBE2D3-219, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 5 BASIC

Gene UBE2D3, Length 527 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-219ENST00000505207 THAP10Q9P2Z0 257 aaPredicted RBP11.66□□□□□ -0.54
UBE2D3-219ENST00000505207 NUDT5Q9UKK9 219 aa11.66□□□□□ -0.54
UBE2D3-219ENST00000505207 HCN2Q9UL51 889 aa11.66□□□□□ -0.54
UBE2D3-219ENST00000505207 RAD54BQ9Y620 910 aa11.66□□□□□ -0.54
UBE2D3-219ENST00000505207 MYH10P35580 1976 aa11.66□□□□□ -0.54
UBE2D3-219ENST00000505207 PLXND1Q9Y4D7 1925 aa11.66□□□□□ -0.54
UBE2D3-219ENST00000505207 CETN3O15182 167 aa11.65□□□□□ -0.54
UBE2D3-219ENST00000505207 HYAL3O43820 417 aaPredicted RBP11.65□□□□□ -0.54
UBE2D3-219ENST00000505207 TRIM49P0CI25 452 aa11.65□□□□□ -0.54
UBE2D3-219ENST00000505207 TRIM49CP0CI26 452 aa11.65□□□□□ -0.54
UBE2D3-219ENST00000505207 EPB41P11171 864 aaKnown RBP11.65□□□□□ -0.54
UBE2D3-219ENST00000505207 CORO1AP31146 461 aaKnown RBP11.65□□□□□ -0.54
UBE2D3-219ENST00000505207 HARS2P49590 506 aaKnown RBP11.65□□□□□ -0.54
UBE2D3-219ENST00000505207 MFAP3P55082 362 aa11.65□□□□□ -0.54
UBE2D3-219ENST00000505207 YWHAEP62258 255 aaKnown RBP11.65□□□□□ -0.54
UBE2D3-219ENST00000505207 PPP3CAQ08209 521 aa11.65□□□□□ -0.54
UBE2D3-219ENST00000505207 EDRF1Q3B7T1 1238 aa11.65□□□□□ -0.54
UBE2D3-219ENST00000505207 FUT11Q495W5 492 aa11.65□□□□□ -0.54
UBE2D3-219ENST00000505207 ZNF394Q53GI3 561 aa11.65□□□□□ -0.54
UBE2D3-219ENST00000505207 TMPRSS6Q8IU80 811 aa11.65□□□□□ -0.54
UBE2D3-219ENST00000505207 DENND1CQ8IV53 801 aa11.65□□□□□ -0.54
UBE2D3-219ENST00000505207 CPXM2Q8N436 756 aa11.65□□□□□ -0.54
UBE2D3-219ENST00000505207 ANKRD52Q8NB46 1076 aa11.65□□□□□ -0.54
UBE2D3-219ENST00000505207 SPRYD3Q8NCJ5 442 aa11.65□□□□□ -0.54
UBE2D3-219ENST00000505207 FBXL13Q8NEE6 735 aa11.65□□□□□ -0.54
UBE2D3-219ENST00000505207 DDI1Q8WTU0 396 aa11.65□□□□□ -0.54
UBE2D3-219ENST00000505207 RNF139Q8WU17 664 aa11.65□□□□□ -0.54
UBE2D3-219ENST00000505207 ZCCHC14Q8WYQ9 949 aaKnown RBP11.65□□□□□ -0.54
UBE2D3-219ENST00000505207 DNASE2BQ8WZ79 361 aa11.65□□□□□ -0.54
UBE2D3-219ENST00000505207 GATA6Q92908 595 aa11.65□□□□□ -0.54
UBE2D3-219ENST00000505207 PLD4Q96BZ4 506 aa11.65□□□□□ -0.54
UBE2D3-219ENST00000505207 SIPA1Q96FS4 1042 aa11.65□□□□□ -0.54
UBE2D3-219ENST00000505207 TOE1Q96GM8 510 aaKnown RBP11.65□□□□□ -0.54
UBE2D3-219ENST00000505207 SCAND2PQ9GZW5 306 aaPredicted RBP11.65□□□□□ -0.54
UBE2D3-219ENST00000505207 PCED1AQ9H1Q7 454 aa11.65□□□□□ -0.54
UBE2D3-219ENST00000505207 APOBEC3GQ9HC16 384 aaKnown RBP11.65□□□□□ -0.54
UBE2D3-219ENST00000505207 CD248Q9HCU0 757 aa11.65□□□□□ -0.54
UBE2D3-219ENST00000505207 RTN4Q9NQC3 1192 aaKnown RBP11.65□□□□□ -0.54
UBE2D3-219ENST00000505207 CISHQ9NSE2 258 aa11.65□□□□□ -0.54
UBE2D3-219ENST00000505207 RAB20Q9NX57 234 aa11.65□□□□□ -0.54
UBE2D3-219ENST00000505207 ELOVL2Q9NXB9 296 aa11.65□□□□□ -0.54
UBE2D3-219ENST00000505207 HESX1Q9UBX0 185 aa11.65□□□□□ -0.54
UBE2D3-219ENST00000505207 PLA2G4CQ9UP65 541 aa11.65□□□□□ -0.54
UBE2D3-219ENST00000505207 MAPK8IP1Q9UQF2 711 aa11.65□□□□□ -0.54
UBE2D3-219ENST00000505207 APOBEC2Q9Y235 224 aaKnown RBP11.65□□□□□ -0.54
UBE2D3-219ENST00000505207 HPSEQ9Y251 543 aa11.65□□□□□ -0.54
UBE2D3-219ENST00000505207 FAM208BQ5VWN6 2430 aa11.65□□□□□ -0.55
UBE2D3-219ENST00000505207 SLC12A8A0AV02 714 aa11.64□□□□□ -0.55
UBE2D3-219ENST00000505207 WASH3PC4AMC7 463 aa11.64□□□□□ -0.55
UBE2D3-219ENST00000505207 ZBED1O96006 694 aa11.64□□□□□ -0.55
UBE2D3-219ENST00000505207 KLKB1P03952 638 aa11.64□□□□□ -0.55
UBE2D3-219ENST00000505207 HMBSP08397 361 aa11.64□□□□□ -0.55
UBE2D3-219ENST00000505207 NCAM1P13591 858 aa11.64□□□□□ -0.55
UBE2D3-219ENST00000505207 CD59P13987 128 aa11.64□□□□□ -0.55
UBE2D3-219ENST00000505207 MXI1P50539 228 aa11.64□□□□□ -0.55
UBE2D3-219ENST00000505207 YWHAGP61981 247 aaKnown RBP eCLIP11.64□□□□□ -0.55
UBE2D3-219ENST00000505207 DPYDQ12882 1025 aa11.64□□□□□ -0.55
UBE2D3-219ENST00000505207 TRIP6Q15654 476 aaKnown RBP11.64□□□□□ -0.55
UBE2D3-219ENST00000505207 MPPE1Q53F39 396 aa11.64□□□□□ -0.55
UBE2D3-219ENST00000505207 FYB2Q5VWT5 728 aa11.64□□□□□ -0.55
UBE2D3-219ENST00000505207 ARHGAP17Q68EM7 881 aa11.64□□□□□ -0.55
UBE2D3-219ENST00000505207 ERLEC1Q96DZ1 483 aa11.64□□□□□ -0.55
UBE2D3-219ENST00000505207 IPO9Q96P70 1041 aaKnown RBP11.64□□□□□ -0.55
UBE2D3-219ENST00000505207 GPR174Q9BXC1 333 aa11.64□□□□□ -0.55
UBE2D3-219ENST00000505207 GTPBP4Q9BZE4 634 aaKnown RBP11.64□□□□□ -0.55
UBE2D3-219ENST00000505207 CIPCQ9C0C6 399 aa11.64□□□□□ -0.55
UBE2D3-219ENST00000505207 LRRC4Q9HBW1 653 aa11.64□□□□□ -0.55
UBE2D3-219ENST00000505207 FSCN3Q9NQT6 498 aa11.64□□□□□ -0.55
UBE2D3-219ENST00000505207 RMND1Q9NWS8 449 aa11.64□□□□□ -0.55
UBE2D3-219ENST00000505207 WSB2Q9NYS7 404 aaPredicted RBP11.64□□□□□ -0.55
UBE2D3-219ENST00000505207 USP36Q9P275 1121 aaKnown RBP11.64□□□□□ -0.55
UBE2D3-219ENST00000505207 AGO1Q9UL18 857 aaKnown RBP11.64□□□□□ -0.55
UBE2D3-219ENST00000505207 KIAA1257Q9ULG3 409 aa11.64□□□□□ -0.55
UBE2D3-219ENST00000505207 HBS1LQ9Y450 684 aaKnown RBP11.64□□□□□ -0.55
UBE2D3-219ENST00000505207 CACNA1GO43497 2377 aa11.63□□□□□ -0.55
UBE2D3-219ENST00000505207 CACNA1EQ15878 2313 aa11.63□□□□□ -0.55
UBE2D3-219ENST00000505207 FAM237AA0A1B0GTK4 181 aa11.63□□□□□ -0.55
UBE2D3-219ENST00000505207 FAM221BA6H8Z2 402 aa11.63□□□□□ -0.55
UBE2D3-219ENST00000505207 METTL12A8MUP2 240 aa11.63□□□□□ -0.55
UBE2D3-219ENST00000505207 CER1O95813 267 aa11.63□□□□□ -0.55
UBE2D3-219ENST00000505207 TOP3BO95985 862 aaKnown RBP11.63□□□□□ -0.55
UBE2D3-219ENST00000505207 TPMTP51580 245 aa11.63□□□□□ -0.55
UBE2D3-219ENST00000505207 TKTL1P51854 596 aa11.63□□□□□ -0.55
UBE2D3-219ENST00000505207 NDUFA8P51970 172 aa11.63□□□□□ -0.55
UBE2D3-219ENST00000505207 RAD23BP54727 409 aa11.63□□□□□ -0.55
UBE2D3-219ENST00000505207 PDE4CQ08493 712 aa11.63□□□□□ -0.55
UBE2D3-219ENST00000505207 ENPP2Q13822 863 aa11.63□□□□□ -0.55
UBE2D3-219ENST00000505207 SUZ12Q15022 739 aaKnown RBP11.63□□□□□ -0.55
UBE2D3-219ENST00000505207 GEN1Q17RS7 908 aa11.63□□□□□ -0.55
UBE2D3-219ENST00000505207 RAB41Q5JT25 222 aa11.63□□□□□ -0.55
UBE2D3-219ENST00000505207 PM20D1Q6GTS8 502 aa11.63□□□□□ -0.55
UBE2D3-219ENST00000505207 SERPINA13PQ6UXR4 307 aa11.63□□□□□ -0.55
UBE2D3-219ENST00000505207 PIGZQ86VD9 579 aa11.63□□□□□ -0.55
UBE2D3-219ENST00000505207 ZNF557Q8N988 423 aaPredicted RBP11.63□□□□□ -0.55
UBE2D3-219ENST00000505207 SLC4A11Q8NBS3 891 aa11.63□□□□□ -0.55
UBE2D3-219ENST00000505207 WFIKKN2Q8TEU8 576 aa11.63□□□□□ -0.55
UBE2D3-219ENST00000505207 PIWIL1Q96J94 861 aaKnown RBP11.63□□□□□ -0.55
UBE2D3-219ENST00000505207 TSG101Q99816 390 aa11.63□□□□□ -0.55
UBE2D3-219ENST00000505207 TMEM121BQ9BXQ6 578 aaPredicted RBP11.63□□□□□ -0.55
UBE2D3-219ENST00000505207 MIR1-1HGQ9H1L0 117 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms