RNA–Protein interactions for RNA: ENST00000504974.1

RFC1-209, Transcript of replication factor C subunit 1, humanhuman

TSL 5

Gene RFC1, Length 495 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-209ENST00000504974 AARS2Q5JTZ9 985 aaKnown RBP3.69□□□□□ -1.82
RFC1-209ENST00000504974 ATPAF1Q5TC12 328 aaPredicted RBP3.69□□□□□ -1.82
RFC1-209ENST00000504974 ANKRD40Q6AI12 368 aa3.69□□□□□ -1.82
RFC1-209ENST00000504974 JMJD6Q6NYC1 403 aaPredicted RBP3.69□□□□□ -1.82
RFC1-209ENST00000504974 RRAGAQ7L523 313 aa3.69□□□□□ -1.82
RFC1-209ENST00000504974 ZNF804AQ7Z570 1209 aa3.69□□□□□ -1.82
RFC1-209ENST00000504974 FAM71DQ8N9W8 422 aa3.69□□□□□ -1.82
RFC1-209ENST00000504974 NTN5Q8WTR8 489 aaPredicted RBP3.69□□□□□ -1.82
RFC1-209ENST00000504974 WDR60Q8WVS4 1066 aa3.69□□□□□ -1.82
RFC1-209ENST00000504974 TRAPPC12Q8WVT3 735 aa3.69□□□□□ -1.82
RFC1-209ENST00000504974 CTHRC1Q96CG8 243 aa3.69□□□□□ -1.82
RFC1-209ENST00000504974 PRR11Q96HE9 360 aaPredicted RBP3.69□□□□□ -1.82
RFC1-209ENST00000504974 HS6ST2Q96MM7 605 aa3.69□□□□□ -1.82
RFC1-209ENST00000504974 WDR24Q96S15 920 aa3.69□□□□□ -1.82
RFC1-209ENST00000504974 RTKNQ9BST9 563 aa3.69□□□□□ -1.82
RFC1-209ENST00000504974 FAM167BQ9BTA0 163 aa3.69□□□□□ -1.82
RFC1-209ENST00000504974 FSD1LQ9BXM9 530 aa3.69□□□□□ -1.82
RFC1-209ENST00000504974 KLK15Q9H2R5 256 aa3.69□□□□□ -1.82
RFC1-209ENST00000504974 RIOX1Q9H6W3 641 aa3.69□□□□□ -1.82
RFC1-209ENST00000504974 MLXIPQ9HAP2 919 aa3.69□□□□□ -1.82
RFC1-209ENST00000504974 TMEM8AQ9HCN3 771 aa3.69□□□□□ -1.82
RFC1-209ENST00000504974 FBXO28Q9NVF7 368 aa3.69□□□□□ -1.82
RFC1-209ENST00000504974 TFCP2L1Q9NZI6 479 aa3.69□□□□□ -1.82
RFC1-209ENST00000504974 HERC5Q9UII4 1024 aaKnown RBP3.69□□□□□ -1.82
RFC1-209ENST00000504974 SHROOM2Q13796 1616 aa3.69□□□□□ -1.82
RFC1-209ENST00000504974 RUSC2Q8N2Y8 1516 aa3.69□□□□□ -1.82
RFC1-209ENST00000504974 SPATA31D1Q6ZQQ2 1576 aa3.68□□□□□ -1.82
RFC1-209ENST00000504974 LOC105378220A0A1B0GUY1 285 aaPredicted RBP3.68□□□□□ -1.82
RFC1-209ENST00000504974 M0R3H8 397 aa3.68□□□□□ -1.82
RFC1-209ENST00000504974 IPO5O00410 1097 aaKnown RBP3.68□□□□□ -1.82
RFC1-209ENST00000504974 CBFA2T3O75081 653 aa3.68□□□□□ -1.82
RFC1-209ENST00000504974 GCATO75600 419 aa3.68□□□□□ -1.82
RFC1-209ENST00000504974 RPP40O75818 363 aaKnown RBP3.68□□□□□ -1.82
RFC1-209ENST00000504974 MYCLP12524 364 aaPredicted RBP3.68□□□□□ -1.82
RFC1-209ENST00000504974 PEPDP12955 493 aa3.68□□□□□ -1.82
RFC1-209ENST00000504974 GPD1P21695 349 aa3.68□□□□□ -1.82
RFC1-209ENST00000504974 DGKQP52824 942 aa3.68□□□□□ -1.82
RFC1-209ENST00000504974 AP2B1P63010 937 aa3.68□□□□□ -1.82
RFC1-209ENST00000504974 CCDC15Q0P6D6 951 aa3.68□□□□□ -1.82
RFC1-209ENST00000504974 MTAPQ13126 283 aa3.68□□□□□ -1.82
RFC1-209ENST00000504974 BIRC3Q13489 604 aa3.68□□□□□ -1.82
RFC1-209ENST00000504974 AASDHQ4L235 1098 aaPredicted RBP3.68□□□□□ -1.82
RFC1-209ENST00000504974 PRR16Q569H4 304 aa3.68□□□□□ -1.82
RFC1-209ENST00000504974 RNASE12Q5GAN4 147 aaKnown RBP3.68□□□□□ -1.82
RFC1-209ENST00000504974 CCDC144NLQ6NUI1 221 aa3.68□□□□□ -1.82
RFC1-209ENST00000504974 SERPINA13PQ6UXR4 307 aa3.68□□□□□ -1.82
RFC1-209ENST00000504974 PIK3AP1Q6ZUJ8 805 aa3.68□□□□□ -1.82
RFC1-209ENST00000504974 CERS3Q8IU89 383 aa3.68□□□□□ -1.82
RFC1-209ENST00000504974 NKAPQ8N5F7 415 aaKnown RBP3.68□□□□□ -1.82
RFC1-209ENST00000504974 TERB1Q8NA31 727 aa3.68□□□□□ -1.82
RFC1-209ENST00000504974 MYRIPQ8NFW9 859 aa3.68□□□□□ -1.82
RFC1-209ENST00000504974 SLC22A17Q8WUG5 538 aa3.68□□□□□ -1.82
RFC1-209ENST00000504974 HMGB4Q8WW32 186 aa3.68□□□□□ -1.82
RFC1-209ENST00000504974 TBC1D5Q92609 795 aa3.68□□□□□ -1.82
RFC1-209ENST00000504974 C3orf49Q96BT1 292 aa3.68□□□□□ -1.82
RFC1-209ENST00000504974 MCRS1Q96EZ8 462 aa3.68□□□□□ -1.82
RFC1-209ENST00000504974 NUDT22Q9BRQ3 303 aa3.68□□□□□ -1.82
RFC1-209ENST00000504974 CINPQ9BW66 212 aaPredicted RBP3.68□□□□□ -1.82
RFC1-209ENST00000504974 TP63Q9H3D4 680 aaPredicted RBP3.68□□□□□ -1.82
RFC1-209ENST00000504974 TAF1DQ9H5J8 278 aaPredicted RBP3.68□□□□□ -1.82
RFC1-209ENST00000504974 CCDC134Q9H6E4 229 aa3.68□□□□□ -1.82
RFC1-209ENST00000504974 ELAC1Q9H777 363 aaKnown RBP3.68□□□□□ -1.82
RFC1-209ENST00000504974 SAP30LQ9HAJ7 183 aa3.68□□□□□ -1.82
RFC1-209ENST00000504974 AGO4Q9HCK5 861 aaKnown RBP3.68□□□□□ -1.82
RFC1-209ENST00000504974 SEPSECSQ9HD40 501 aaKnown RBP3.68□□□□□ -1.82
RFC1-209ENST00000504974 SLC17A6Q9P2U8 582 aa3.68□□□□□ -1.82
RFC1-209ENST00000504974 PCDHB7Q9Y5E2 793 aa3.68□□□□□ -1.82
RFC1-209ENST00000504974 NPHP1O15259 732 aa3.67□□□□□ -1.82
RFC1-209ENST00000504974 PRAMEF2O60811 474 aa3.67□□□□□ -1.82
RFC1-209ENST00000504974 TMIGD3P0DMS9 266 aaPredicted RBP3.67□□□□□ -1.82
RFC1-209ENST00000504974 ITPKBP27987 946 aa3.67□□□□□ -1.82
RFC1-209ENST00000504974 GALNSP34059 522 aa3.67□□□□□ -1.82
RFC1-209ENST00000504974 THBS4P35443 961 aa3.67□□□□□ -1.82
RFC1-209ENST00000504974 CACNA2D1P54289 1103 aa3.67□□□□□ -1.82
RFC1-209ENST00000504974 POLE2P56282 527 aa3.67□□□□□ -1.82
RFC1-209ENST00000504974 RAE1P78406 368 aaKnown RBP3.67□□□□□ -1.82
RFC1-209ENST00000504974 CBFBQ13951 182 aa3.67□□□□□ -1.82
RFC1-209ENST00000504974 TRIM71Q2Q1W2 868 aaKnown RBP3.67□□□□□ -1.82
RFC1-209ENST00000504974 TMEM119Q4V9L6 283 aa3.67□□□□□ -1.82
RFC1-209ENST00000504974 ZNF569Q5MCW4 686 aa3.67□□□□□ -1.82
RFC1-209ENST00000504974 DPY19L2P1Q6NXN4 242 aa3.67□□□□□ -1.82
RFC1-209ENST00000504974 MSANTD2Q6P1R3 559 aa3.67□□□□□ -1.82
RFC1-209ENST00000504974 CEP85Q6P2H3 762 aa3.67□□□□□ -1.82
RFC1-209ENST00000504974 TMEM65Q6PI78 240 aa3.67□□□□□ -1.82
RFC1-209ENST00000504974 MTHFD1LQ6UB35 978 aa3.67□□□□□ -1.82
RFC1-209ENST00000504974 LDHAL6AQ6ZMR3 332 aa3.67□□□□□ -1.82
RFC1-209ENST00000504974 ZNF354CQ86Y25 554 aa3.67□□□□□ -1.82
RFC1-209ENST00000504974 SLC44A2Q8IWA5 706 aaPredicted RBP3.67□□□□□ -1.82
RFC1-209ENST00000504974 SFTPA1Q8IWL2 248 aa3.67□□□□□ -1.82
RFC1-209ENST00000504974 CPXCR1Q8N123 301 aa3.67□□□□□ -1.82
RFC1-209ENST00000504974 CLASRPQ8N2M8 674 aaKnown RBP3.67□□□□□ -1.82
RFC1-209ENST00000504974 GALNT15Q8N3T1 639 aa3.67□□□□□ -1.82
RFC1-209ENST00000504974 DDX51Q8N8A6 666 aaKnown RBP eCLIP3.67□□□□□ -1.82
RFC1-209ENST00000504974 PNPLA1Q8N8W4 532 aa3.67□□□□□ -1.82
RFC1-209ENST00000504974 SIMC1Q8NDZ2 872 aa3.67□□□□□ -1.82
RFC1-209ENST00000504974 MAFAQ8NHW3 353 aaPredicted RBP3.67□□□□□ -1.82
RFC1-209ENST00000504974 SCAMP5Q8TAC9 235 aa3.67□□□□□ -1.82
RFC1-209ENST00000504974 STT3BQ8TCJ2 826 aa3.67□□□□□ -1.82
RFC1-209ENST00000504974 GOLGA1Q92805 767 aa3.67□□□□□ -1.82
RFC1-209ENST00000504974 TBC1D20Q96BZ9 403 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms