RNA–Protein interactions for RNA: ENST00000504849.5

RFC1-208, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-208ENST00000504849 ARL6IP4Q66PJ3 421 aaKnown RBP4.5□□□□□ -1.69
RFC1-208ENST00000504849 CPLX2Q6PUV4 134 aaKnown RBP4.5□□□□□ -1.69
RFC1-208ENST00000504849 SYNE3Q6ZMZ3 975 aa4.5□□□□□ -1.69
RFC1-208ENST00000504849 BMP8AQ7Z5Y6 402 aa4.5□□□□□ -1.69
RFC1-208ENST00000504849 MRGPREQ86SM8 312 aa4.5□□□□□ -1.69
RFC1-208ENST00000504849 MOGAT3Q86VF5 341 aa4.5□□□□□ -1.69
RFC1-208ENST00000504849 STPG3Q8N7X2 389 aa4.5□□□□□ -1.69
RFC1-208ENST00000504849 CEP112Q8N8E3 955 aa4.5□□□□□ -1.69
RFC1-208ENST00000504849 ZMIZ2Q8NF64 920 aa4.5□□□□□ -1.69
RFC1-208ENST00000504849 ENGASEQ8NFI3 743 aa4.5□□□□□ -1.69
RFC1-208ENST00000504849 LINS1Q8NG48 757 aa4.5□□□□□ -1.69
RFC1-208ENST00000504849 OR6B3Q8NGW1 331 aa4.5□□□□□ -1.69
RFC1-208ENST00000504849 ZNF384Q8TF68 577 aa4.5□□□□□ -1.69
RFC1-208ENST00000504849 RFFLQ8WZ73 363 aa4.5□□□□□ -1.69
RFC1-208ENST00000504849 HOXB13Q92826 284 aaPredicted RBP4.5□□□□□ -1.69
RFC1-208ENST00000504849 TRIM43Q96BQ3 446 aaPredicted RBP4.5□□□□□ -1.69
RFC1-208ENST00000504849 C18orf8Q96DM3 657 aa4.5□□□□□ -1.69
RFC1-208ENST00000504849 ZNF274Q96GC6 653 aaPredicted RBP4.5□□□□□ -1.69
RFC1-208ENST00000504849 MAELQ96JY0 434 aaKnown RBP4.5□□□□□ -1.69
RFC1-208ENST00000504849 SNX22Q96L94 193 aa4.5□□□□□ -1.69
RFC1-208ENST00000504849 FAM227BQ96M60 508 aa4.5□□□□□ -1.69
RFC1-208ENST00000504849 C7orf26Q96N11 449 aa4.5□□□□□ -1.69
RFC1-208ENST00000504849 GDF15Q99988 308 aa4.5□□□□□ -1.69
RFC1-208ENST00000504849 XPO4Q9C0E2 1151 aaKnown RBP4.5□□□□□ -1.69
RFC1-208ENST00000504849 BOLA2Q9H3K6 86 aa4.5□□□□□ -1.69
RFC1-208ENST00000504849 GOLPH3LQ9H4A5 285 aa4.5□□□□□ -1.69
RFC1-208ENST00000504849 SYNPO2LQ9H987 977 aa4.5□□□□□ -1.69
RFC1-208ENST00000504849 SH3GLB2Q9NR46 395 aa4.5□□□□□ -1.69
RFC1-208ENST00000504849 ZNF446Q9NWS9 450 aa4.5□□□□□ -1.69
RFC1-208ENST00000504849 STK32BQ9NY57 414 aa4.5□□□□□ -1.69
RFC1-208ENST00000504849 PLA2G3Q9NZ20 509 aa4.5□□□□□ -1.69
RFC1-208ENST00000504849 IFNKQ9P0W0 207 aa4.5□□□□□ -1.69
RFC1-208ENST00000504849 CPA4Q9UI42 421 aa4.5□□□□□ -1.69
RFC1-208ENST00000504849 FBXO10Q9UK96 956 aa4.5□□□□□ -1.69
RFC1-208ENST00000504849 MAP3K2Q9Y2U5 619 aa4.5□□□□□ -1.69
RFC1-208ENST00000504849 CEMIPQ8WUJ3 1361 aa4.5□□□□□ -1.69
RFC1-208ENST00000504849 NRXN3Q9Y4C0 1643 aa4.5□□□□□ -1.69
RFC1-208ENST00000504849 MRC1P22897 1456 aa4.49□□□□□ -1.69
RFC1-208ENST00000504849 BCL9LQ86UU0 1499 aa4.49□□□□□ -1.69
RFC1-208ENST00000504849 UTYO14607 1347 aa4.49□□□□□ -1.69
RFC1-208ENST00000504849 AFF2P51816 1311 aa4.49□□□□□ -1.69
RFC1-208ENST00000504849 RPTORQ8N122 1335 aa4.49□□□□□ -1.69
RFC1-208ENST00000504849 MYO5BQ9ULV0 1848 aa4.49□□□□□ -1.69
RFC1-208ENST00000504849 ZNF142P52746 1687 aaPredicted RBP4.49□□□□□ -1.69
RFC1-208ENST00000504849 CCDC151A5D8V7 595 aa4.49□□□□□ -1.69
RFC1-208ENST00000504849 SPTLC2O15270 562 aa4.49□□□□□ -1.69
RFC1-208ENST00000504849 POLR3GO15318 223 aaPredicted RBP4.49□□□□□ -1.69
RFC1-208ENST00000504849 MPIG6BO95866 241 aa4.49□□□□□ -1.69
RFC1-208ENST00000504849 MT-ND5P03915 603 aa4.49□□□□□ -1.69
RFC1-208ENST00000504849 MYCLP12524 364 aaPredicted RBP4.49□□□□□ -1.69
RFC1-208ENST00000504849 HNRNPLP14866 589 aaKnown RBP eCLIP4.49□□□□□ -1.69
RFC1-208ENST00000504849 MALP21145 153 aa4.49□□□□□ -1.69
RFC1-208ENST00000504849 MCM3P25205 808 aa4.49□□□□□ -1.69
RFC1-208ENST00000504849 CST5P28325 142 aaPredicted RBP4.49□□□□□ -1.69
RFC1-208ENST00000504849 RPS19P39019 145 aaKnown RBP4.49□□□□□ -1.69
RFC1-208ENST00000504849 UBASH3AP57075 661 aa4.49□□□□□ -1.69
RFC1-208ENST00000504849 IRX3P78415 501 aaPredicted RBP4.49□□□□□ -1.69
RFC1-208ENST00000504849 PFKPQ01813 784 aa4.49□□□□□ -1.69
RFC1-208ENST00000504849 CEBPZQ03701 1054 aaKnown RBP4.49□□□□□ -1.69
RFC1-208ENST00000504849 TLE1Q04724 770 aa4.49□□□□□ -1.69
RFC1-208ENST00000504849 GRM7Q14831 915 aa4.49□□□□□ -1.69
RFC1-208ENST00000504849 SEPT2Q15019 361 aa4.49□□□□□ -1.69
RFC1-208ENST00000504849 CDC37Q16543 378 aaPredicted RBP4.49□□□□□ -1.69
RFC1-208ENST00000504849 TBR1Q16650 682 aa4.49□□□□□ -1.69
RFC1-208ENST00000504849 ZSCAN26Q16670 478 aa4.49□□□□□ -1.69
RFC1-208ENST00000504849 C1orf141Q5JVX7 400 aa4.49□□□□□ -1.69
RFC1-208ENST00000504849 ARMCX5Q6P1M9 558 aa4.49□□□□□ -1.69
RFC1-208ENST00000504849 GADL1Q6ZQY3 521 aa4.49□□□□□ -1.69
RFC1-208ENST00000504849 RSPH3Q86UC2 560 aa4.49□□□□□ -1.69
RFC1-208ENST00000504849 HEATR4Q86WZ0 1026 aa4.49□□□□□ -1.69
RFC1-208ENST00000504849 C2CD5Q86YS7 1000 aa4.49□□□□□ -1.69
RFC1-208ENST00000504849 VRK3Q8IV63 474 aa4.49□□□□□ -1.69
RFC1-208ENST00000504849 VSTM4Q8IW00 320 aa4.49□□□□□ -1.69
RFC1-208ENST00000504849 SH2D3CQ8N5H7 860 aa4.49□□□□□ -1.69
RFC1-208ENST00000504849 IQUBQ8NA54 791 aa4.49□□□□□ -1.69
RFC1-208ENST00000504849 C9orf106Q8NAJ2 232 aa4.49□□□□□ -1.69
RFC1-208ENST00000504849 CCDC191Q8NCU4 936 aa4.49□□□□□ -1.69
RFC1-208ENST00000504849 NSUN7Q8NE18 718 aaKnown RBP4.49□□□□□ -1.69
RFC1-208ENST00000504849 FBXO18Q8NFZ0 1043 aa4.49□□□□□ -1.69
RFC1-208ENST00000504849 IPCEF1Q8WWN9 437 aaPredicted RBP4.49□□□□□ -1.69
RFC1-208ENST00000504849 THAP4Q8WY91 577 aa4.49□□□□□ -1.69
RFC1-208ENST00000504849 RUBCNQ92622 972 aa4.49□□□□□ -1.69
RFC1-208ENST00000504849 HTRA1Q92743 480 aa4.49□□□□□ -1.69
RFC1-208ENST00000504849 C8orf76Q96K31 380 aa4.49□□□□□ -1.69
RFC1-208ENST00000504849 TCEANC2Q96MN5 208 aa4.49□□□□□ -1.69
RFC1-208ENST00000504849 USP28Q96RU2 1077 aa4.49□□□□□ -1.69
RFC1-208ENST00000504849 BARD1Q99728 777 aaKnown RBP4.49□□□□□ -1.69
RFC1-208ENST00000504849 PDCD2LQ9BRP1 358 aa4.49□□□□□ -1.69
RFC1-208ENST00000504849 KATNAL1Q9BW62 490 aa4.49□□□□□ -1.69
RFC1-208ENST00000504849 CARD6Q9BX69 1037 aa4.49□□□□□ -1.69
RFC1-208ENST00000504849 AP1M1Q9BXS5 423 aa4.49□□□□□ -1.69
RFC1-208ENST00000504849 HAPLN2Q9GZV7 340 aa4.49□□□□□ -1.69
RFC1-208ENST00000504849 CCDC68Q9H2F9 335 aa4.49□□□□□ -1.69
RFC1-208ENST00000504849 DHX36Q9H2U1 1008 aaKnown RBP4.49□□□□□ -1.69
RFC1-208ENST00000504849 PRDM13Q9H4Q3 707 aa4.49□□□□□ -1.69
RFC1-208ENST00000504849 SACM1LQ9NTJ5 587 aa4.49□□□□□ -1.69
RFC1-208ENST00000504849 ANKEF1Q9NU02 776 aa4.49□□□□□ -1.69
RFC1-208ENST00000504849 UCKL1Q9NWZ5 548 aa4.49□□□□□ -1.69
RFC1-208ENST00000504849 MED16Q9Y2X0 877 aa4.49□□□□□ -1.69
RFC1-208ENST00000504849 ABCC6O95255 1503 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms