RNA–Protein interactions for RNA: ENST00000504719.6

PVT1-201, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 754 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-201ENST00000504719 FAM217AQ8IXS0 508 aa26.49■■□□□ 1.83
PVT1-201ENST00000504719 CPXM2Q8N436 756 aa26.49■■□□□ 1.83
PVT1-201ENST00000504719 MDGA1Q8NFP4 955 aa26.49■■□□□ 1.83
PVT1-201ENST00000504719 BHMTQ93088 406 aa26.49■■□□□ 1.83
PVT1-201ENST00000504719 TPSD1Q9BZJ3 242 aa26.49■■□□□ 1.83
PVT1-201ENST00000504719 POLMQ9NP87 494 aaPredicted RBP26.49■■□□□ 1.83
PVT1-201ENST00000504719 SIX2Q9NPC8 291 aa26.49■■□□□ 1.83
PVT1-201ENST00000504719 SEMA4GQ9NTN9 838 aa26.49■■□□□ 1.83
PVT1-201ENST00000504719 PRRT4C9JH25 899 aa26.48■■□□□ 1.83
PVT1-201ENST00000504719 DCLK1O15075 740 aa26.48■■□□□ 1.83
PVT1-201ENST00000504719 ALDH1A2O94788 518 aa26.48■■□□□ 1.83
PVT1-201ENST00000504719 FBXO21O94952 628 aa26.48■■□□□ 1.83
PVT1-201ENST00000504719 EPN2O95208 641 aa26.48■■□□□ 1.83
PVT1-201ENST00000504719 TPM2P07951 284 aa26.48■■□□□ 1.83
PVT1-201ENST00000504719 GPD2P43304 727 aa26.48■■□□□ 1.83
PVT1-201ENST00000504719 RPL34P49207 117 aaKnown RBP26.48■■□□□ 1.83
PVT1-201ENST00000504719 LMNB2Q03252 620 aa26.48■■□□□ 1.83
PVT1-201ENST00000504719 CSRP2Q16527 193 aa26.48■■□□□ 1.83
PVT1-201ENST00000504719 CLEC4CQ8WTT0 213 aa26.48■■□□□ 1.83
PVT1-201ENST00000504719 DUSP15Q9H1R2 295 aaPredicted RBP26.48■■□□□ 1.83
PVT1-201ENST00000504719 HSD3B7Q9H2F3 369 aa26.48■■□□□ 1.83
PVT1-201ENST00000504719 ABCA7Q8IZY2 2146 aa26.48■■□□□ 1.83
PVT1-201ENST00000504719 PRR5-ARHGAP8B1AHC4 643 aa26.47■■□□□ 1.83
PVT1-201ENST00000504719 ZNF18P17022 549 aa26.47■■□□□ 1.83
PVT1-201ENST00000504719 CDK11BP21127 795 aaKnown RBP26.47■■□□□ 1.83
PVT1-201ENST00000504719 ZNF165P49910 485 aa26.47■■□□□ 1.83
PVT1-201ENST00000504719 ARHGAP8P85298 464 aa26.47■■□□□ 1.83
PVT1-201ENST00000504719 KCNMA1Q12791 1236 aa26.47■■□□□ 1.83
PVT1-201ENST00000504719 MEA1Q16626 185 aa26.47■■□□□ 1.83
PVT1-201ENST00000504719 ARHGAP44Q17R89 818 aa26.47■■□□□ 1.83
PVT1-201ENST00000504719 RSPO4Q2I0M5 234 aaPredicted RBP26.47■■□□□ 1.83
PVT1-201ENST00000504719 USP39Q53GS9 565 aaKnown RBP26.47■■□□□ 1.83
PVT1-201ENST00000504719 MSANTD2Q6P1R3 559 aa26.47■■□□□ 1.83
PVT1-201ENST00000504719 DHX40Q8IX18 779 aaKnown RBP26.47■■□□□ 1.83
PVT1-201ENST00000504719 ANKRD20A12PQ8NF67 263 aa26.47■■□□□ 1.83
PVT1-201ENST00000504719 ZNF606Q8WXB4 792 aa26.47■■□□□ 1.83
PVT1-201ENST00000504719 ARRDC1-AS1Q9H2J1 176 aa26.47■■□□□ 1.83
PVT1-201ENST00000504719 DLL3Q9NYJ7 618 aa26.47■■□□□ 1.83
PVT1-201ENST00000504719 THADAQ6YHU6 1953 aa26.47■■□□□ 1.83
PVT1-201ENST00000504719 BECN2A8MW95 431 aa26.46■■□□□ 1.83
PVT1-201ENST00000504719 MED7O43513 233 aa26.46■■□□□ 1.83
PVT1-201ENST00000504719 LTFP02788 710 aa26.46■■□□□ 1.83
PVT1-201ENST00000504719 HARS2P49590 506 aaKnown RBP26.46■■□□□ 1.83
PVT1-201ENST00000504719 ZSCAN23Q3MJ62 389 aa26.46■■□□□ 1.83
PVT1-201ENST00000504719 EGFLAMQ63HQ2 1017 aa26.46■■□□□ 1.83
PVT1-201ENST00000504719 DENND1BQ6P3S1 775 aa26.46■■□□□ 1.83
PVT1-201ENST00000504719 OLIG1Q8TAK6 271 aa26.46■■□□□ 1.83
PVT1-201ENST00000504719 LIMA1Q9UHB6 759 aaKnown RBP26.46■■□□□ 1.83
PVT1-201ENST00000504719 AJAP1Q9UKB5 411 aaPredicted RBP26.46■■□□□ 1.83
PVT1-201ENST00000504719 INVSQ9Y283 1065 aa26.46■■□□□ 1.83
PVT1-201ENST00000504719 SLC27A6Q9Y2P4 619 aa26.46■■□□□ 1.83
PVT1-201ENST00000504719 DYNC1LI1Q9Y6G9 523 aaKnown RBP26.46■■□□□ 1.83
PVT1-201ENST00000504719 PLXND1Q9Y4D7 1925 aa26.45■■□□□ 1.83
PVT1-201ENST00000504719 CEP250Q9BV73 2442 aa26.45■■□□□ 1.83
PVT1-201ENST00000504719 SMTNL1A8MU46 457 aa26.45■■□□□ 1.82
PVT1-201ENST00000504719 CYBBP04839 570 aa26.45■■□□□ 1.82
PVT1-201ENST00000504719 GNA15P30679 374 aa26.45■■□□□ 1.82
PVT1-201ENST00000504719 NTSR1P30989 418 aa26.45■■□□□ 1.82
PVT1-201ENST00000504719 COPB1P53618 953 aaKnown RBP26.45■■□□□ 1.82
PVT1-201ENST00000504719 PUM1Q14671 1186 aaKnown RBP eCLIP26.45■■□□□ 1.82
PVT1-201ENST00000504719 DPY19L2P1Q6NXN4 242 aa26.45■■□□□ 1.82
PVT1-201ENST00000504719 PRR23CQ6ZRP0 262 aa26.45■■□□□ 1.82
PVT1-201ENST00000504719 MIS12Q9H081 205 aa26.45■■□□□ 1.82
PVT1-201ENST00000504719 ACP6Q9NPH0 428 aa26.45■■□□□ 1.82
PVT1-201ENST00000504719 DNAJC12Q9UKB3 198 aa26.45■■□□□ 1.82
PVT1-201ENST00000504719 TCRBV21S2A2A0A5A6 115 aa26.44■■□□□ 1.82
PVT1-201ENST00000504719 MSI1O43347 362 aaKnown RBP26.44■■□□□ 1.82
PVT1-201ENST00000504719 THAP12O43422 761 aa26.44■■□□□ 1.82
PVT1-201ENST00000504719 RHOBTB1O94844 696 aa26.44■■□□□ 1.82
PVT1-201ENST00000504719 ACADSBP45954 432 aa26.44■■□□□ 1.82
PVT1-201ENST00000504719 C11orf74Q86VG3 221 aa26.44■■□□□ 1.82
PVT1-201ENST00000504719 STK32AQ8WU08 396 aa26.44■■□□□ 1.82
PVT1-201ENST00000504719 SHC3Q92529 594 aa26.44■■□□□ 1.82
PVT1-201ENST00000504719 GOLGA1Q92805 767 aa26.44■■□□□ 1.82
PVT1-201ENST00000504719 ACOX2Q99424 681 aa26.44■■□□□ 1.82
PVT1-201ENST00000504719 LSM14BQ9BX40 385 aaKnown RBP26.44■■□□□ 1.82
PVT1-201ENST00000504719 SLC4A5Q9BY07 1137 aa26.44■■□□□ 1.82
PVT1-201ENST00000504719 ST7Q9NRC1 585 aa26.44■■□□□ 1.82
PVT1-201ENST00000504719 STOML2Q9UJZ1 356 aa26.44■■□□□ 1.82
PVT1-201ENST00000504719 PCDHGA5Q9Y5G8 931 aa26.44■■□□□ 1.82
PVT1-201ENST00000504719 NUP205Q92621 2012 aa26.44■■□□□ 1.82
PVT1-201ENST00000504719 LATS1O95835 1130 aa26.43■■□□□ 1.82
PVT1-201ENST00000504719 ATP1A3P13637 1013 aa26.43■■□□□ 1.82
PVT1-201ENST00000504719 HOXB2P14652 356 aa26.43■■□□□ 1.82
PVT1-201ENST00000504719 SDHBP21912 280 aa26.43■■□□□ 1.82
PVT1-201ENST00000504719 USP8P40818 1118 aa26.43■■□□□ 1.82
PVT1-201ENST00000504719 WASP42768 502 aa26.43■■□□□ 1.82
PVT1-201ENST00000504719 ELF2Q15723 593 aa26.43■■□□□ 1.82
PVT1-201ENST00000504719 FKBP15Q5T1M5 1219 aa26.43■■□□□ 1.82
PVT1-201ENST00000504719 SMYD5Q6GMV2 418 aa26.43■■□□□ 1.82
PVT1-201ENST00000504719 ERMP1Q7Z2K6 904 aa26.43■■□□□ 1.82
PVT1-201ENST00000504719 SCUBE3Q8IX30 993 aa26.43■■□□□ 1.82
PVT1-201ENST00000504719 HMGB4Q8WW32 186 aa26.43■■□□□ 1.82
PVT1-201ENST00000504719 BCCIPQ9P287 314 aaKnown RBP eCLIP26.43■■□□□ 1.82
PVT1-201ENST00000504719 CYTH4Q9UIA0 394 aa26.43■■□□□ 1.82
PVT1-201ENST00000504719 A0A1W2PQF6 199 aa26.42■■□□□ 1.82
PVT1-201ENST00000504719 GFRA2O00451 464 aa26.42■■□□□ 1.82
PVT1-201ENST00000504719 IGLV3-27P01718 113 aa26.42■■□□□ 1.82
PVT1-201ENST00000504719 FYNP06241 537 aa26.42■■□□□ 1.82
PVT1-201ENST00000504719 GBP1P32455 592 aa26.42■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms