RNA–Protein interactions for RNA: ENST00000504430.5

NIPBL-204, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 2

Gene NIPBL, Length 3,455 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-204ENST00000504430 KCTD21Q4G0X4 260 aa5.5□□□□□ -1.53
NIPBL-204ENST00000504430 CDKAL1Q5VV42 579 aa5.5□□□□□ -1.53
NIPBL-204ENST00000504430 C1orf186Q6ZWK4 172 aa5.5□□□□□ -1.53
NIPBL-204ENST00000504430 WDR63Q8IWG1 891 aa5.5□□□□□ -1.53
NIPBL-204ENST00000504430 POGLUT1Q8NBL1 392 aa5.5□□□□□ -1.53
NIPBL-204ENST00000504430 BRIX1Q8TDN6 353 aaKnown RBP5.5□□□□□ -1.53
NIPBL-204ENST00000504430 MYOCQ99972 504 aa5.5□□□□□ -1.53
NIPBL-204ENST00000504430 RNF32Q9H0A6 362 aa5.5□□□□□ -1.53
NIPBL-204ENST00000504430 CNNM1Q9NRU3 951 aa5.5□□□□□ -1.53
NIPBL-204ENST00000504430 EXOC6BQ9Y2D4 811 aa5.5□□□□□ -1.53
NIPBL-204ENST00000504430 CCL27Q9Y4X3 112 aa5.5□□□□□ -1.53
NIPBL-204ENST00000504430 SNX9Q9Y5X1 595 aa5.5□□□□□ -1.53
NIPBL-204ENST00000504430 TTC21BQ7Z4L5 1316 aa5.5□□□□□ -1.53
NIPBL-204ENST00000504430 CLRN2A0PK11 232 aa5.5□□□□□ -1.53
NIPBL-204ENST00000504430 ARHGEF37A1IGU5 675 aa5.5□□□□□ -1.53
NIPBL-204ENST00000504430 OR6C76A6NM76 312 aa5.5□□□□□ -1.53
NIPBL-204ENST00000504430 C16orf96A6NNT2 1141 aa5.5□□□□□ -1.53
NIPBL-204ENST00000504430 F2RL2O00254 374 aa5.5□□□□□ -1.53
NIPBL-204ENST00000504430 TNPO2O14787 897 aaKnown RBP5.5□□□□□ -1.53
NIPBL-204ENST00000504430 LETM1O95202 739 aaPredicted RBP5.5□□□□□ -1.53
NIPBL-204ENST00000504430 NTRK1P04629 796 aa5.5□□□□□ -1.53
NIPBL-204ENST00000504430 LTA4HP09960 611 aaKnown RBP5.5□□□□□ -1.53
NIPBL-204ENST00000504430 NR2C2P49116 596 aa5.5□□□□□ -1.53
NIPBL-204ENST00000504430 RTP1P59025 263 aa5.5□□□□□ -1.53
NIPBL-204ENST00000504430 YBX1P67809 324 aaKnown RBP5.5□□□□□ -1.53
NIPBL-204ENST00000504430 CDC42EP1Q00587 391 aa5.5□□□□□ -1.53
NIPBL-204ENST00000504430 PPATQ06203 517 aa5.5□□□□□ -1.53
NIPBL-204ENST00000504430 CFAP221Q4G0U5 840 aa5.5□□□□□ -1.53
NIPBL-204ENST00000504430 OTUD7BQ6GQQ9 843 aa5.5□□□□□ -1.53
NIPBL-204ENST00000504430 MYOCDQ8IZQ8 938 aa5.5□□□□□ -1.53
NIPBL-204ENST00000504430 AADATQ8N5Z0 425 aa5.5□□□□□ -1.53
NIPBL-204ENST00000504430 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.5□□□□□ -1.53
NIPBL-204ENST00000504430 MECRQ9BV79 373 aa5.5□□□□□ -1.53
NIPBL-204ENST00000504430 PLVAPQ9BX97 442 aa5.5□□□□□ -1.53
NIPBL-204ENST00000504430 TMEM165Q9HC07 324 aa5.5□□□□□ -1.53
NIPBL-204ENST00000504430 NECTIN3Q9NQS3 549 aa5.5□□□□□ -1.53
NIPBL-204ENST00000504430 SEMA3GQ9NS98 782 aa5.5□□□□□ -1.53
NIPBL-204ENST00000504430 RBM12Q9NTZ6 932 aaKnown RBP5.5□□□□□ -1.53
NIPBL-204ENST00000504430 ZNF70Q9UC06 446 aaPredicted RBP5.5□□□□□ -1.53
NIPBL-204ENST00000504430 PCDHB6Q9Y5E3 794 aa5.5□□□□□ -1.53
NIPBL-204ENST00000504430 U3KQE9 123 aa5.5□□□□□ -1.53
NIPBL-204ENST00000504430 NFIBO00712 420 aa5.49□□□□□ -1.53
NIPBL-204ENST00000504430 KCNK5O95279 499 aa5.49□□□□□ -1.53
NIPBL-204ENST00000504430 OR2C1O95371 312 aa5.49□□□□□ -1.53
NIPBL-204ENST00000504430 SPARCP09486 303 aa5.49□□□□□ -1.53
NIPBL-204ENST00000504430 EGR1P18146 543 aa5.49□□□□□ -1.53
NIPBL-204ENST00000504430 TCF7P36402 384 aaPredicted RBP5.49□□□□□ -1.53
NIPBL-204ENST00000504430 CCR10P46092 362 aa5.49□□□□□ -1.53
NIPBL-204ENST00000504430 CAPZA2P47755 286 aa5.49□□□□□ -1.53
NIPBL-204ENST00000504430 TLE1Q04724 770 aa5.49□□□□□ -1.53
NIPBL-204ENST00000504430 RELQ04864 619 aaPredicted RBP5.49□□□□□ -1.53
NIPBL-204ENST00000504430 DGKDQ16760 1214 aa5.49□□□□□ -1.53
NIPBL-204ENST00000504430 C2orf76Q3KRA6 126 aa5.49□□□□□ -1.53
NIPBL-204ENST00000504430 KIAA1841Q6NSI8 718 aa5.49□□□□□ -1.53
NIPBL-204ENST00000504430 WFDC3Q8IUB2 231 aa5.49□□□□□ -1.53
NIPBL-204ENST00000504430 KIF18AQ8NI77 898 aa5.49□□□□□ -1.53
NIPBL-204ENST00000504430 GANCQ8TET4 914 aa5.49□□□□□ -1.53
NIPBL-204ENST00000504430 KAT2AQ92830 837 aa5.49□□□□□ -1.53
NIPBL-204ENST00000504430 TAOK3Q9H2K8 898 aa5.49□□□□□ -1.53
NIPBL-204ENST00000504430 C19orf44Q9H6X5 657 aa5.49□□□□□ -1.53
NIPBL-204ENST00000504430 SENP2Q9HC62 589 aa5.49□□□□□ -1.53
NIPBL-204ENST00000504430 SLC6A20Q9NP91 592 aa5.49□□□□□ -1.53
NIPBL-204ENST00000504430 PHLPP2Q6ZVD8 1323 aa5.49□□□□□ -1.53
NIPBL-204ENST00000504430 TMEM82A0PJX8 343 aa5.49□□□□□ -1.53
NIPBL-204ENST00000504430 SYCE3A1L190 88 aa5.49□□□□□ -1.53
NIPBL-204ENST00000504430 KPNA7A9QM74 516 aa5.49□□□□□ -1.53
NIPBL-204ENST00000504430 J3KTA2 159 aa5.49□□□□□ -1.53
NIPBL-204ENST00000504430 WFS1O76024 890 aa5.49□□□□□ -1.53
NIPBL-204ENST00000504430 TYMPP19971 482 aa5.49□□□□□ -1.53
NIPBL-204ENST00000504430 MST1P26927 711 aa5.49□□□□□ -1.53
NIPBL-204ENST00000504430 MC5RP33032 325 aa5.49□□□□□ -1.53
NIPBL-204ENST00000504430 MLLT6P55198 1093 aaPredicted RBP5.49□□□□□ -1.53
NIPBL-204ENST00000504430 PRKCZQ05513 592 aa5.49□□□□□ -1.53
NIPBL-204ENST00000504430 NPRL3Q12980 569 aa5.49□□□□□ -1.53
NIPBL-204ENST00000504430 KARSQ15046 597 aaKnown RBP5.49□□□□□ -1.53
NIPBL-204ENST00000504430 PKN1Q16512 942 aa5.49□□□□□ -1.53
NIPBL-204ENST00000504430 BAK1Q16611 211 aa5.49□□□□□ -1.53
NIPBL-204ENST00000504430 DEPDC1Q5TB30 811 aa5.49□□□□□ -1.53
NIPBL-204ENST00000504430 LRIG3Q6UXM1 1119 aa5.49□□□□□ -1.53
NIPBL-204ENST00000504430 C20orf204Q6ZNR8 217 aa5.49□□□□□ -1.53
NIPBL-204ENST00000504430 MB21D1Q8N884 522 aa5.49□□□□□ -1.53
NIPBL-204ENST00000504430 PLEKHO2Q8TD55 490 aa5.49□□□□□ -1.53
NIPBL-204ENST00000504430 CHURC1Q8WUH1 139 aa5.49□□□□□ -1.53
NIPBL-204ENST00000504430 ROBO4Q8WZ75 1007 aa5.49□□□□□ -1.53
NIPBL-204ENST00000504430 TMIGD2Q96BF3 282 aa5.49□□□□□ -1.53
NIPBL-204ENST00000504430 SUCLG2Q96I99 432 aa5.49□□□□□ -1.53
NIPBL-204ENST00000504430 FAM111AQ96PZ2 611 aa5.49□□□□□ -1.53
NIPBL-204ENST00000504430 TCF25Q9BQ70 676 aa5.49□□□□□ -1.53
NIPBL-204ENST00000504430 SRSF8Q9BRL6 282 aaKnown RBP5.49□□□□□ -1.53
NIPBL-204ENST00000504430 CHMP5Q9NZZ3 219 aa5.49□□□□□ -1.53
NIPBL-204ENST00000504430 CLDN16Q9Y5I7 305 aa5.49□□□□□ -1.53
NIPBL-204ENST00000504430 NCF1BA6NI72 391 aaPredicted RBP5.49□□□□□ -1.53
NIPBL-204ENST00000504430 NCF1CA8MVU1 366 aaPredicted RBP5.49□□□□□ -1.53
NIPBL-204ENST00000504430 LILRB5O75023 590 aa5.49□□□□□ -1.53
NIPBL-204ENST00000504430 NTSR2O95665 410 aa5.49□□□□□ -1.53
NIPBL-204ENST00000504430 CD1AP06126 327 aa5.49□□□□□ -1.53
NIPBL-204ENST00000504430 PTPN3P26045 913 aa5.49□□□□□ -1.53
NIPBL-204ENST00000504430 NOS3P29474 1203 aa5.49□□□□□ -1.53
NIPBL-204ENST00000504430 STAT5AP42229 794 aa5.49□□□□□ -1.53
NIPBL-204ENST00000504430 PIP4K2AP48426 406 aaPredicted RBP5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms