RNA–Protein interactions for RNA: ENST00000503945.2

MED28-203, Transcript of mediator complex subunit 28, humanhuman

TSL 1 (best)

Gene MED28, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-203ENST00000503945 OLIG1Q8TAK6 271 aa12.51□□□□□ -0.41
MED28-203ENST00000503945 LMO3Q8TAP4 145 aa12.51□□□□□ -0.41
MED28-203ENST00000503945 DDI1Q8WTU0 396 aa12.51□□□□□ -0.41
MED28-203ENST00000503945 SLC35F5Q8WV83 523 aa12.51□□□□□ -0.41
MED28-203ENST00000503945 RLN3Q8WXF3 142 aa12.51□□□□□ -0.41
MED28-203ENST00000503945 GOLGA1Q92805 767 aa12.51□□□□□ -0.41
MED28-203ENST00000503945 PLD4Q96BZ4 506 aa12.51□□□□□ -0.41
MED28-203ENST00000503945 CNGB3Q9NQW8 809 aa12.51□□□□□ -0.41
MED28-203ENST00000503945 KIAA1468Q9P260 1216 aa12.51□□□□□ -0.41
MED28-203ENST00000503945 FBXO10Q9UK96 956 aa12.51□□□□□ -0.41
MED28-203ENST00000503945 CEP192Q8TEP8 1941 aa12.5□□□□□ -0.41
MED28-203ENST00000503945 PCNX2A6NKB5 2137 aa12.5□□□□□ -0.41
MED28-203ENST00000503945 ASCC3Q8N3C0 2202 aaKnown RBP12.5□□□□□ -0.41
MED28-203ENST00000503945 C1QTNF9BB2RNN3 333 aa12.5□□□□□ -0.41
MED28-203ENST00000503945 PATE3B3GLJ2 98 aa12.5□□□□□ -0.41
MED28-203ENST00000503945 PRRT4C9JH25 899 aa12.5□□□□□ -0.41
MED28-203ENST00000503945 O00370 1275 aa12.5□□□□□ -0.41
MED28-203ENST00000503945 GFRA2O00451 464 aa12.5□□□□□ -0.41
MED28-203ENST00000503945 CDX4O14627 284 aaPredicted RBP12.5□□□□□ -0.41
MED28-203ENST00000503945 AFPP02771 609 aaKnown RBP12.5□□□□□ -0.41
MED28-203ENST00000503945 C1QTNF9P0C862 333 aa12.5□□□□□ -0.41
MED28-203ENST00000503945 HOXB2P14652 356 aa12.5□□□□□ -0.41
MED28-203ENST00000503945 P2RY2P41231 377 aa12.5□□□□□ -0.41
MED28-203ENST00000503945 GCNT1Q02742 428 aa12.5□□□□□ -0.41
MED28-203ENST00000503945 PMS2CLQ68D20 193 aa12.5□□□□□ -0.41
MED28-203ENST00000503945 TOGARAM2Q6ZUX3 1019 aa12.5□□□□□ -0.41
MED28-203ENST00000503945 FMNL3Q8IVF7 1028 aa12.5□□□□□ -0.41
MED28-203ENST00000503945 TRIM59Q8IWR1 403 aa12.5□□□□□ -0.41
MED28-203ENST00000503945 SCML4Q8N228 414 aa12.5□□□□□ -0.41
MED28-203ENST00000503945 UBR7Q8N806 425 aa12.5□□□□□ -0.41
MED28-203ENST00000503945 UCMAQ8WVF2 138 aa12.5□□□□□ -0.41
MED28-203ENST00000503945 TFAP2BQ92481 460 aa12.5□□□□□ -0.41
MED28-203ENST00000503945 EDEM1Q92611 657 aa12.5□□□□□ -0.41
MED28-203ENST00000503945 PIGKQ92643 395 aa12.5□□□□□ -0.41
MED28-203ENST00000503945 TMA16Q96EY4 203 aaKnown RBP12.5□□□□□ -0.41
MED28-203ENST00000503945 HSFY1Q96LI6 401 aa12.5□□□□□ -0.41
MED28-203ENST00000503945 SLC2A11Q9BYW1 496 aa12.5□□□□□ -0.41
MED28-203ENST00000503945 UBE2TQ9NPD8 197 aaPredicted RBP12.5□□□□□ -0.41
MED28-203ENST00000503945 SFMBT1Q9UHJ3 866 aa12.5□□□□□ -0.41
MED28-203ENST00000503945 SLC27A6Q9Y2P4 619 aa12.5□□□□□ -0.41
MED28-203ENST00000503945 HBS1LQ9Y450 684 aaKnown RBP12.5□□□□□ -0.41
MED28-203ENST00000503945 FRYQ5TBA9 3013 aa12.5□□□□□ -0.41
MED28-203ENST00000503945 ADAMTS9Q9P2N4 1935 aa12.49□□□□□ -0.41
MED28-203ENST00000503945 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.49□□□□□ -0.41
MED28-203ENST00000503945 LNP1A1A4G5 178 aa12.49□□□□□ -0.41
MED28-203ENST00000503945 YJEFN3A6XGL0 299 aa12.49□□□□□ -0.41
MED28-203ENST00000503945 E7ENQ6 273 aa12.49□□□□□ -0.41
MED28-203ENST00000503945 NPC1O15118 1278 aa12.49□□□□□ -0.41
MED28-203ENST00000503945 ZNF217O75362 1048 aa12.49□□□□□ -0.41
MED28-203ENST00000503945 TOP3BO95985 862 aaKnown RBP12.49□□□□□ -0.41
MED28-203ENST00000503945 PENKP01210 267 aaPredicted RBP12.49□□□□□ -0.41
MED28-203ENST00000503945 RGS7P49802 495 aa12.49□□□□□ -0.41
MED28-203ENST00000503945 MARSP56192 900 aaKnown RBP12.49□□□□□ -0.41
MED28-203ENST00000503945 IRX4P78413 519 aa12.49□□□□□ -0.41
MED28-203ENST00000503945 TRIP4Q15650 581 aaPredicted RBP12.49□□□□□ -0.41
MED28-203ENST00000503945 MAP7D1Q3KQU3 841 aa12.49□□□□□ -0.41
MED28-203ENST00000503945 PKDCCQ504Y2 493 aa12.49□□□□□ -0.41
MED28-203ENST00000503945 MPPE1Q53F39 396 aa12.49□□□□□ -0.41
MED28-203ENST00000503945 SH3PXD2AQ5TCZ1 1133 aa12.49□□□□□ -0.41
MED28-203ENST00000503945 DAB2IPQ5VWQ8 1189 aa12.49□□□□□ -0.41
MED28-203ENST00000503945 FYB2Q5VWT5 728 aa12.49□□□□□ -0.41
MED28-203ENST00000503945 EGFLAMQ63HQ2 1017 aa12.49□□□□□ -0.41
MED28-203ENST00000503945 PMF1Q6P1K2 205 aa12.49□□□□□ -0.41
MED28-203ENST00000503945 SLC36A4Q6YBV0 504 aa12.49□□□□□ -0.41
MED28-203ENST00000503945 CYP2U1Q7Z449 544 aa12.49□□□□□ -0.41
MED28-203ENST00000503945 UNC45BQ8IWX7 931 aa12.49□□□□□ -0.41
MED28-203ENST00000503945 TMEFF1Q8IYR6 380 aa12.49□□□□□ -0.41
MED28-203ENST00000503945 CPXM2Q8N436 756 aa12.49□□□□□ -0.41
MED28-203ENST00000503945 IPO4Q8TEX9 1081 aaKnown RBP12.49□□□□□ -0.41
MED28-203ENST00000503945 IRGQQ8WZA9 623 aa12.49□□□□□ -0.41
MED28-203ENST00000503945 FAM81BQ96LP2 452 aa12.49□□□□□ -0.41
MED28-203ENST00000503945 ACOX2Q99424 681 aa12.49□□□□□ -0.41
MED28-203ENST00000503945 CHMP5Q9NZZ3 219 aa12.49□□□□□ -0.41
MED28-203ENST00000503945 RWDD2AQ9UIY3 292 aa12.49□□□□□ -0.41
MED28-203ENST00000503945 HCN2Q9UL51 889 aa12.49□□□□□ -0.41
MED28-203ENST00000503945 WASF3Q9UPY6 502 aa12.49□□□□□ -0.41
MED28-203ENST00000503945 TNRC6BQ9UPQ9 1833 aaKnown RBP12.48□□□□□ -0.41
MED28-203ENST00000503945 A0A1W2PQF6 199 aa12.48□□□□□ -0.41
MED28-203ENST00000503945 WASH3PC4AMC7 463 aa12.48□□□□□ -0.41
MED28-203ENST00000503945 M0QYV0 167 aa12.48□□□□□ -0.41
MED28-203ENST00000503945 PIK3R2O00459 728 aa12.48□□□□□ -0.41
MED28-203ENST00000503945 AP5Z1O43299 807 aa12.48□□□□□ -0.41
MED28-203ENST00000503945 MED7O43513 233 aa12.48□□□□□ -0.41
MED28-203ENST00000503945 FBXO21O94952 628 aa12.48□□□□□ -0.41
MED28-203ENST00000503945 CHRM1P11229 460 aaPredicted RBP12.48□□□□□ -0.41
MED28-203ENST00000503945 KRT5P13647 590 aa12.48□□□□□ -0.41
MED28-203ENST00000503945 GABRG2P18507 467 aa12.48□□□□□ -0.41
MED28-203ENST00000503945 SPINK2P20155 84 aa12.48□□□□□ -0.41
MED28-203ENST00000503945 DPP6P42658 865 aa12.48□□□□□ -0.41
MED28-203ENST00000503945 ZNF132P52740 706 aa12.48□□□□□ -0.41
MED28-203ENST00000503945 MFAP3P55082 362 aa12.48□□□□□ -0.41
MED28-203ENST00000503945 DAOAP59103 153 aa12.48□□□□□ -0.41
MED28-203ENST00000503945 ZNF445P59923 1031 aa12.48□□□□□ -0.41
MED28-203ENST00000503945 ARID5AQ03989 594 aa12.48□□□□□ -0.41
MED28-203ENST00000503945 FOXC1Q12948 553 aa12.48□□□□□ -0.41
MED28-203ENST00000503945 STARD3Q14849 445 aa12.48□□□□□ -0.41
MED28-203ENST00000503945 ADGRF1Q5T601 910 aa12.48□□□□□ -0.41
MED28-203ENST00000503945 ENOSF1Q7L5Y1 443 aa12.48□□□□□ -0.41
MED28-203ENST00000503945 SCUBE3Q8IX30 993 aa12.48□□□□□ -0.41
MED28-203ENST00000503945 FRMD1Q8N878 549 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms