RNA–Protein interactions for RNA: ENST00000503427.5

HMGXB3-202, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,275 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-202ENST00000503427 CDH18Q13634 790 aa16.6■□□□□ 0.25
HMGXB3-202ENST00000503427 ERMARDQ5T6L9 678 aa16.6■□□□□ 0.25
HMGXB3-202ENST00000503427 ATP5BP06576 529 aaKnown RBP16.6■□□□□ 0.25
HMGXB3-202ENST00000503427 MRPS31Q92665 395 aaKnown RBP16.6■□□□□ 0.25
HMGXB3-202ENST00000503427 XPNPEP3Q9NQH7 507 aa16.6■□□□□ 0.25
HMGXB3-202ENST00000503427 TSPAN16Q9UKR8 245 aa16.6■□□□□ 0.25
HMGXB3-202ENST00000503427 PDE2AO00408 941 aaPredicted RBP16.59■□□□□ 0.25
HMGXB3-202ENST00000503427 C2CD2LO14523 706 aa16.59■□□□□ 0.25
HMGXB3-202ENST00000503427 ADCYAP1R1P41586 468 aa16.59■□□□□ 0.25
HMGXB3-202ENST00000503427 PPP3CCP48454 512 aa16.59■□□□□ 0.25
HMGXB3-202ENST00000503427 MAP3K7CLP57077 242 aa16.59■□□□□ 0.25
HMGXB3-202ENST00000503427 CHRNB3Q05901 458 aa16.59■□□□□ 0.25
HMGXB3-202ENST00000503427 FSCN1Q16658 493 aaKnown RBP16.59■□□□□ 0.25
HMGXB3-202ENST00000503427 MFSD7Q6UXD7 560 aa16.59■□□□□ 0.25
HMGXB3-202ENST00000503427 MREGQ8N565 214 aa16.59■□□□□ 0.25
HMGXB3-202ENST00000503427 CCDC33Q8N5R6 958 aa16.59■□□□□ 0.25
HMGXB3-202ENST00000503427 DDX43Q9NXZ2 648 aaKnown RBP16.59■□□□□ 0.25
HMGXB3-202ENST00000503427 TRPM5Q9NZQ8 1165 aa16.59■□□□□ 0.25
HMGXB3-202ENST00000503427 ROBO3Q96MS0 1386 aa16.59■□□□□ 0.25
HMGXB3-202ENST00000503427 FAM95CA0A1B0GW59 222 aa16.59■□□□□ 0.25
HMGXB3-202ENST00000503427 FCHO1O14526 889 aa16.59■□□□□ 0.25
HMGXB3-202ENST00000503427 URODP06132 367 aa16.59■□□□□ 0.25
HMGXB3-202ENST00000503427 KPNA1P52294 538 aaPredicted RBP16.59■□□□□ 0.25
HMGXB3-202ENST00000503427 CCDC153Q494R4 210 aa16.59■□□□□ 0.25
HMGXB3-202ENST00000503427 BBS7Q8IWZ6 715 aa16.59■□□□□ 0.25
HMGXB3-202ENST00000503427 TTC30BQ8N4P2 665 aa16.59■□□□□ 0.25
HMGXB3-202ENST00000503427 ZCCHC9Q8N567 271 aaKnown RBP16.59■□□□□ 0.25
HMGXB3-202ENST00000503427 BRD8Q9H0E9 1235 aa16.59■□□□□ 0.25
HMGXB3-202ENST00000503427 THAP1Q9NVV9 213 aa16.59■□□□□ 0.25
HMGXB3-202ENST00000503427 VANGL2Q9ULK5 521 aa16.59■□□□□ 0.25
HMGXB3-202ENST00000503427 PCDHAC2Q9Y5I4 1007 aa16.59■□□□□ 0.25
HMGXB3-202ENST00000503427 JCHAINP01591 159 aa16.59■□□□□ 0.25
HMGXB3-202ENST00000503427 ALDH2P05091 517 aa16.59■□□□□ 0.25
HMGXB3-202ENST00000503427 ZNF23P17027 643 aa16.59■□□□□ 0.25
HMGXB3-202ENST00000503427 TKTL1P51854 596 aa16.59■□□□□ 0.25
HMGXB3-202ENST00000503427 TMEM132BQ14DG7 1078 aa16.59■□□□□ 0.25
HMGXB3-202ENST00000503427 CBWD6Q4V339 395 aa16.59■□□□□ 0.25
HMGXB3-202ENST00000503427 CCDC92Q53HC0 331 aaPredicted RBP16.59■□□□□ 0.25
HMGXB3-202ENST00000503427 TTMPQ5BVD1 217 aa16.59■□□□□ 0.25
HMGXB3-202ENST00000503427 CBWD3Q5JTY5 395 aa16.59■□□□□ 0.25
HMGXB3-202ENST00000503427 CBWD5Q5RIA9 395 aa16.59■□□□□ 0.25
HMGXB3-202ENST00000503427 RIN3Q8TB24 985 aa16.59■□□□□ 0.25
HMGXB3-202ENST00000503427 OTULINQ96BN8 352 aa16.59■□□□□ 0.25
HMGXB3-202ENST00000503427 TINF2Q9BSI4 451 aa16.59■□□□□ 0.25
HMGXB3-202ENST00000503427 BTNL10A8MVZ5 291 aa16.59■□□□□ 0.25
HMGXB3-202ENST00000503427 KLRC4O43908 158 aa16.59■□□□□ 0.25
HMGXB3-202ENST00000503427 GP5P40197 560 aa16.59■□□□□ 0.25
HMGXB3-202ENST00000503427 SLC34A1Q06495 639 aa16.59■□□□□ 0.25
HMGXB3-202ENST00000503427 TBL3Q12788 808 aaKnown RBP16.59■□□□□ 0.25
HMGXB3-202ENST00000503427 NFIL3Q16649 462 aa16.59■□□□□ 0.25
HMGXB3-202ENST00000503427 YTHDF3Q7Z739 585 aaKnown RBP16.59■□□□□ 0.25
HMGXB3-202ENST00000503427 TRIM69Q86WT6 500 aa16.59■□□□□ 0.25
HMGXB3-202ENST00000503427 KATNAL2Q8IYT4 538 aa16.59■□□□□ 0.25
HMGXB3-202ENST00000503427 KYQ8NBH2 561 aa16.59■□□□□ 0.25
HMGXB3-202ENST00000503427 DNAJC19Q96DA6 116 aa16.59■□□□□ 0.25
HMGXB3-202ENST00000503427 OXNAD1Q96HP4 312 aaPredicted RBP16.59■□□□□ 0.25
HMGXB3-202ENST00000503427 PAWRQ96IZ0 340 aaKnown RBP16.59■□□□□ 0.25
HMGXB3-202ENST00000503427 SYTL2Q9HCH5 934 aa16.59■□□□□ 0.25
HMGXB3-202ENST00000503427 SAR1AQ9NR31 198 aa16.59■□□□□ 0.25
HMGXB3-202ENST00000503427 LACTBL1A8MY62 500 aa16.58■□□□□ 0.25
HMGXB3-202ENST00000503427 SSTR1P30872 391 aa16.58■□□□□ 0.25
HMGXB3-202ENST00000503427 ACAP1Q15027 740 aa16.58■□□□□ 0.25
HMGXB3-202ENST00000503427 TJAP1Q5JTD0 557 aa16.58■□□□□ 0.25
HMGXB3-202ENST00000503427 MIIPQ5JXC2 388 aa16.58■□□□□ 0.25
HMGXB3-202ENST00000503427 OVOS1Q6IE37 1185 aa16.58■□□□□ 0.25
HMGXB3-202ENST00000503427 FOXR2Q6PJQ5 311 aa16.58■□□□□ 0.25
HMGXB3-202ENST00000503427 MIB1Q86YT6 1006 aa16.58■□□□□ 0.25
HMGXB3-202ENST00000503427 TCF7L2Q9NQB0 619 aa16.58■□□□□ 0.25
HMGXB3-202ENST00000503427 TRPV2Q9Y5S1 764 aa16.58■□□□□ 0.25
HMGXB3-202ENST00000503427 EFCAB14O75071 495 aa16.58■□□□□ 0.24
HMGXB3-202ENST00000503427 ATP9AO75110 1047 aa16.58■□□□□ 0.24
HMGXB3-202ENST00000503427 CLPTM1O96005 669 aa16.58■□□□□ 0.24
HMGXB3-202ENST00000503427 FUT2Q10981 343 aa16.58■□□□□ 0.24
HMGXB3-202ENST00000503427 PKN2Q16513 984 aaKnown RBP16.58■□□□□ 0.24
HMGXB3-202ENST00000503427 TRIM60Q495X7 471 aa16.58■□□□□ 0.24
HMGXB3-202ENST00000503427 N4BP2L1Q5TBK1 243 aaPredicted RBP16.58■□□□□ 0.24
HMGXB3-202ENST00000503427 SLC9A9Q8IVB4 645 aa16.58■□□□□ 0.24
HMGXB3-202ENST00000503427 DEFB107AQ8IZN7 70 aa16.58■□□□□ 0.24
HMGXB3-202ENST00000503427 FAM9CQ8IZT9 166 aa16.58■□□□□ 0.24
HMGXB3-202ENST00000503427 B4GALNT2Q8NHY0 566 aa16.58■□□□□ 0.24
HMGXB3-202ENST00000503427 HES6Q96HZ4 224 aa16.58■□□□□ 0.24
HMGXB3-202ENST00000503427 ANKRD63C9JTQ0 380 aa16.58■□□□□ 0.24
HMGXB3-202ENST00000503427 EIF4BP23588 611 aaKnown RBP16.58■□□□□ 0.24
HMGXB3-202ENST00000503427 SLC1A6P48664 564 aa16.58■□□□□ 0.24
HMGXB3-202ENST00000503427 PRKAA1Q13131 559 aa16.58■□□□□ 0.24
HMGXB3-202ENST00000503427 MTA1Q13330 715 aa16.58■□□□□ 0.24
HMGXB3-202ENST00000503427 FUT11Q495W5 492 aa16.58■□□□□ 0.24
HMGXB3-202ENST00000503427 GRTP1Q5TC63 336 aa16.58■□□□□ 0.24
HMGXB3-202ENST00000503427 SLC22A9Q8IVM8 553 aa16.58■□□□□ 0.24
HMGXB3-202ENST00000503427 SRPK1Q96SB4 655 aaKnown RBP16.58■□□□□ 0.24
HMGXB3-202ENST00000503427 APOL2Q9BQE5 337 aa16.58■□□□□ 0.24
HMGXB3-202ENST00000503427 EXOSC4Q9NPD3 245 aaKnown RBP16.58■□□□□ 0.24
HMGXB3-202ENST00000503427 TMEM51Q9NW97 253 aa16.58■□□□□ 0.24
HMGXB3-202ENST00000503427 DNPEPQ9ULA0 475 aa16.58■□□□□ 0.24
HMGXB3-202ENST00000503427 MROH7Q68CQ1 1323 aa16.58■□□□□ 0.24
HMGXB3-202ENST00000503427 SLC15A5A6NIM6 579 aa16.58■□□□□ 0.24
HMGXB3-202ENST00000503427 PRKAA2P54646 552 aa16.58■□□□□ 0.24
HMGXB3-202ENST00000503427 PAN2Q504Q3 1202 aaKnown RBP16.58■□□□□ 0.24
HMGXB3-202ENST00000503427 WDR59Q6PJI9 974 aa16.58■□□□□ 0.24
HMGXB3-202ENST00000503427 LRRC55Q6ZSA7 311 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms