RNA–Protein interactions for RNA: ENST00000503360.1

HMGB1P35-201, Transcript of high mobility group box 1 pseudogene 35, humanhuman

BASIC

Gene HMGB1P35, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P35-201ENST00000503360 SFPQP23246 707 aaKnown RBP eCLIP2.83□□□□□ -1.96
HMGB1P35-201ENST00000503360 RBL1P28749 1068 aa2.83□□□□□ -1.96
HMGB1P35-201ENST00000503360 SLC5A2P31639 672 aa2.83□□□□□ -1.96
HMGB1P35-201ENST00000503360 LINC00205P59089 165 aa2.83□□□□□ -1.96
HMGB1P35-201ENST00000503360 HYAL1Q12794 435 aa2.83□□□□□ -1.96
HMGB1P35-201ENST00000503360 FHL3Q13643 280 aa2.83□□□□□ -1.96
HMGB1P35-201ENST00000503360 ATP1A4Q13733 1029 aa2.83□□□□□ -1.96
HMGB1P35-201ENST00000503360 BMPR2Q13873 1038 aa2.83□□□□□ -1.96
HMGB1P35-201ENST00000503360 DAZAP2Q15038 168 aaPredicted RBP2.83□□□□□ -1.96
HMGB1P35-201ENST00000503360 SUPT20HL1Q3ZLR7 823 aa2.83□□□□□ -1.96
HMGB1P35-201ENST00000503360 CEP78Q5JTW2 689 aa2.83□□□□□ -1.96
HMGB1P35-201ENST00000503360 TICAM2Q86XR7 235 aa2.83□□□□□ -1.96
HMGB1P35-201ENST00000503360 GATAD2AQ86YP4 633 aa2.83□□□□□ -1.96
HMGB1P35-201ENST00000503360 CACNA2D3Q8IZS8 1091 aa2.83□□□□□ -1.96
HMGB1P35-201ENST00000503360 LRRC71Q8N4P6 559 aa2.83□□□□□ -1.96
HMGB1P35-201ENST00000503360 SPATA5Q8NB90 893 aa2.83□□□□□ -1.96
HMGB1P35-201ENST00000503360 MBD3L2Q8NHZ7 208 aaPredicted RBP2.83□□□□□ -1.96
HMGB1P35-201ENST00000503360 RFKQ969G6 155 aa2.83□□□□□ -1.96
HMGB1P35-201ENST00000503360 VCPIP1Q96JH7 1222 aa2.83□□□□□ -1.96
HMGB1P35-201ENST00000503360 LYZL4Q96KX0 146 aa2.83□□□□□ -1.96
HMGB1P35-201ENST00000503360 SCLT1Q96NL6 688 aa2.83□□□□□ -1.96
HMGB1P35-201ENST00000503360 PAGR1Q9BTK6 254 aa2.83□□□□□ -1.96
HMGB1P35-201ENST00000503360 SORBS1Q9BX66 1292 aaKnown RBP2.83□□□□□ -1.96
HMGB1P35-201ENST00000503360 QTRT1Q9BXR0 403 aaKnown RBP2.83□□□□□ -1.96
HMGB1P35-201ENST00000503360 MAGEH1Q9H213 219 aa2.83□□□□□ -1.96
HMGB1P35-201ENST00000503360 ARHGEF3Q9NR81 526 aa2.83□□□□□ -1.96
HMGB1P35-201ENST00000503360 HELLSQ9NRZ9 838 aa2.83□□□□□ -1.96
HMGB1P35-201ENST00000503360 STEAP1Q9UHE8 339 aa2.83□□□□□ -1.96
HMGB1P35-201ENST00000503360 CCNL1Q9UK58 526 aaPredicted RBP2.83□□□□□ -1.96
HMGB1P35-201ENST00000503360 RIMKLBQ9ULI2 386 aa2.83□□□□□ -1.96
HMGB1P35-201ENST00000503360 CA14Q9ULX7 337 aa2.83□□□□□ -1.96
HMGB1P35-201ENST00000503360 SCAF8Q9UPN6 1271 aaKnown RBP2.83□□□□□ -1.96
HMGB1P35-201ENST00000503360 SLC27A6Q9Y2P4 619 aa2.83□□□□□ -1.96
HMGB1P35-201ENST00000503360 DTNAQ9Y4J8 743 aa2.83□□□□□ -1.96
HMGB1P35-201ENST00000503360 PCDHGB3Q9Y5G1 929 aa2.83□□□□□ -1.96
HMGB1P35-201ENST00000503360 PNMA6EA0A0J9YXQ4 647 aa2.82□□□□□ -1.96
HMGB1P35-201ENST00000503360 OR2W5A6NFC9 320 aa2.82□□□□□ -1.96
HMGB1P35-201ENST00000503360 PRRT4C9JH25 899 aa2.82□□□□□ -1.96
HMGB1P35-201ENST00000503360 AP4M1O00189 453 aa2.82□□□□□ -1.96
HMGB1P35-201ENST00000503360 FCHO1O14526 889 aa2.82□□□□□ -1.96
HMGB1P35-201ENST00000503360 PCDH17O14917 1159 aa2.82□□□□□ -1.96
HMGB1P35-201ENST00000503360 DNPH1O43598 174 aa2.82□□□□□ -1.96
HMGB1P35-201ENST00000503360 CREB3O43889 395 aa2.82□□□□□ -1.96
HMGB1P35-201ENST00000503360 NTSR2O95665 410 aa2.82□□□□□ -1.96
HMGB1P35-201ENST00000503360 GLP2RO95838 553 aa2.82□□□□□ -1.96
HMGB1P35-201ENST00000503360 ITGA5P08648 1049 aa2.82□□□□□ -1.96
HMGB1P35-201ENST00000503360 TMEM191BP0C7N4 346 aa2.82□□□□□ -1.96
HMGB1P35-201ENST00000503360 GYS1P13807 737 aa2.82□□□□□ -1.96
HMGB1P35-201ENST00000503360 CD19P15391 556 aa2.82□□□□□ -1.96
HMGB1P35-201ENST00000503360 HTR7P34969 479 aa2.82□□□□□ -1.96
HMGB1P35-201ENST00000503360 PPM1FP49593 454 aaPredicted RBP2.82□□□□□ -1.96
HMGB1P35-201ENST00000503360 THBS3P49746 956 aa2.82□□□□□ -1.96
HMGB1P35-201ENST00000503360 ALDH18A1P54886 795 aaKnown RBP2.82□□□□□ -1.96
HMGB1P35-201ENST00000503360 TRIM71Q2Q1W2 868 aaKnown RBP2.82□□□□□ -1.96
HMGB1P35-201ENST00000503360 SULT6B1Q6IMI4 303 aa2.82□□□□□ -1.96
HMGB1P35-201ENST00000503360 DPY19L3Q6ZPD9 716 aa2.82□□□□□ -1.96
HMGB1P35-201ENST00000503360 ZNF551Q7Z340 670 aaPredicted RBP2.82□□□□□ -1.96
HMGB1P35-201ENST00000503360 ZNF804AQ7Z570 1209 aa2.82□□□□□ -1.96
HMGB1P35-201ENST00000503360 RAB11FIP4Q86YS3 637 aa2.82□□□□□ -1.96
HMGB1P35-201ENST00000503360 MYRIPQ8NFW9 859 aa2.82□□□□□ -1.96
HMGB1P35-201ENST00000503360 SUN3Q8TAQ9 357 aa2.82□□□□□ -1.96
HMGB1P35-201ENST00000503360 UBE2Q2Q8WVN8 375 aa2.82□□□□□ -1.96
HMGB1P35-201ENST00000503360 TRAPPC12Q8WVT3 735 aa2.82□□□□□ -1.96
HMGB1P35-201ENST00000503360 TRIM63Q969Q1 353 aa2.82□□□□□ -1.96
HMGB1P35-201ENST00000503360 REPS1Q96D71 796 aa2.82□□□□□ -1.96
HMGB1P35-201ENST00000503360 RSPRY1Q96DX4 576 aa2.82□□□□□ -1.96
HMGB1P35-201ENST00000503360 KATNAL1Q9BW62 490 aa2.82□□□□□ -1.96
HMGB1P35-201ENST00000503360 SPRTNQ9H040 489 aaPredicted RBP2.82□□□□□ -1.96
HMGB1P35-201ENST00000503360 BCCIPQ9P287 314 aaKnown RBP eCLIP2.82□□□□□ -1.96
HMGB1P35-201ENST00000503360 NKX1-2Q9UD57 310 aaPredicted RBP2.82□□□□□ -1.96
HMGB1P35-201ENST00000503360 SH2B3Q9UQQ2 575 aa2.82□□□□□ -1.96
HMGB1P35-201ENST00000503360 COL15A1P39059 1388 aa2.82□□□□□ -1.96
HMGB1P35-201ENST00000503360 TCF20Q9UGU0 1960 aaKnown RBP2.81□□□□□ -1.96
HMGB1P35-201ENST00000503360 FAM90A8PA6NJQ4 464 aa2.81□□□□□ -1.96
HMGB1P35-201ENST00000503360 CYSRT1A8MQ03 144 aa2.81□□□□□ -1.96
HMGB1P35-201ENST00000503360 IPO5O00410 1097 aaKnown RBP2.81□□□□□ -1.96
HMGB1P35-201ENST00000503360 CES2O00748 559 aa2.81□□□□□ -1.96
HMGB1P35-201ENST00000503360 PMPCBO75439 489 aa2.81□□□□□ -1.96
HMGB1P35-201ENST00000503360 TAF5LO75529 589 aa2.81□□□□□ -1.96
HMGB1P35-201ENST00000503360 WDR47O94967 919 aa2.81□□□□□ -1.96
HMGB1P35-201ENST00000503360 FGBP02675 491 aa2.81□□□□□ -1.96
HMGB1P35-201ENST00000503360 PRKCBP05771 671 aa2.81□□□□□ -1.96
HMGB1P35-201ENST00000503360 ANXA6P08133 673 aa2.81□□□□□ -1.96
HMGB1P35-201ENST00000503360 ITGA2BP08514 1039 aa2.81□□□□□ -1.96
HMGB1P35-201ENST00000503360 FAM90A13PP0C7W8 464 aa2.81□□□□□ -1.96
HMGB1P35-201ENST00000503360 FAM90A24PP0C7X0 464 aa2.81□□□□□ -1.96
HMGB1P35-201ENST00000503360 EBLN1P0CF75 366 aa2.81□□□□□ -1.96
HMGB1P35-201ENST00000503360 TMEM225BP0DP42 221 aa2.81□□□□□ -1.96
HMGB1P35-201ENST00000503360 JUPP14923 745 aa2.81□□□□□ -1.96
HMGB1P35-201ENST00000503360 VEGFAP15692 232 aaPredicted RBP2.81□□□□□ -1.96
HMGB1P35-201ENST00000503360 CREB1P16220 341 aa2.81□□□□□ -1.96
HMGB1P35-201ENST00000503360 NDUFB7P17568 137 aa2.81□□□□□ -1.96
HMGB1P35-201ENST00000503360 DRD1P21728 446 aa2.81□□□□□ -1.96
HMGB1P35-201ENST00000503360 KLRK1P26718 216 aa2.81□□□□□ -1.96
HMGB1P35-201ENST00000503360 MPGP29372 298 aa2.81□□□□□ -1.96
HMGB1P35-201ENST00000503360 AKT1P31749 480 aa2.81□□□□□ -1.96
HMGB1P35-201ENST00000503360 GKP32189 559 aa2.81□□□□□ -1.96
HMGB1P35-201ENST00000503360 CYP2C18P33260 490 aa2.81□□□□□ -1.96
HMGB1P35-201ENST00000503360 PBX1P40424 430 aa2.81□□□□□ -1.96
HMGB1P35-201ENST00000503360 RENBPP51606 427 aa2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms