RNA–Protein interactions for RNA: ENST00000502802.1

HMGB1P3-201, Transcript of high mobility group box 1 pseudogene 3, humanhuman

BASIC

Gene HMGB1P3, Length 616 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P3-201ENST00000502802 CLIC5Q9NZA1 410 aa5.9□□□□□ -1.46
HMGB1P3-201ENST00000502802 ORC3Q9UBD5 711 aaPredicted RBP5.9□□□□□ -1.46
HMGB1P3-201ENST00000502802 DKK2Q9UBU2 259 aa5.9□□□□□ -1.46
HMGB1P3-201ENST00000502802 TRPC5Q9UL62 973 aaPredicted RBP5.9□□□□□ -1.46
HMGB1P3-201ENST00000502802 CNPY2Q9Y2B0 182 aa5.9□□□□□ -1.46
HMGB1P3-201ENST00000502802 PGPEP1LA6NFU8 196 aa5.89□□□□□ -1.47
HMGB1P3-201ENST00000502802 AGAP5A6NIR3 686 aa5.89□□□□□ -1.47
HMGB1P3-201ENST00000502802 MUSKO15146 869 aa5.89□□□□□ -1.47
HMGB1P3-201ENST00000502802 FIBPO43427 364 aa5.89□□□□□ -1.47
HMGB1P3-201ENST00000502802 SPRY2O43597 315 aa5.89□□□□□ -1.47
HMGB1P3-201ENST00000502802 PRICKLE3O43900 615 aaPredicted RBP5.89□□□□□ -1.47
HMGB1P3-201ENST00000502802 ZBED4O75132 1171 aa5.89□□□□□ -1.47
HMGB1P3-201ENST00000502802 GFPT2O94808 682 aa5.89□□□□□ -1.47
HMGB1P3-201ENST00000502802 ONECUT2O95948 504 aa5.89□□□□□ -1.47
HMGB1P3-201ENST00000502802 CSF1P09603 554 aa5.89□□□□□ -1.47
HMGB1P3-201ENST00000502802 CHN1P15882 459 aa5.89□□□□□ -1.47
HMGB1P3-201ENST00000502802 ADRA1DP25100 572 aa5.89□□□□□ -1.47
HMGB1P3-201ENST00000502802 ACRV1P26436 265 aa5.89□□□□□ -1.47
HMGB1P3-201ENST00000502802 ABCD3P28288 659 aa5.89□□□□□ -1.47
HMGB1P3-201ENST00000502802 GKP32189 559 aa5.89□□□□□ -1.47
HMGB1P3-201ENST00000502802 GRK5P34947 590 aa5.89□□□□□ -1.47
HMGB1P3-201ENST00000502802 PCP4P48539 62 aa5.89□□□□□ -1.47
HMGB1P3-201ENST00000502802 CBFBQ13951 182 aa5.89□□□□□ -1.47
HMGB1P3-201ENST00000502802 ICAM4Q14773 271 aa5.89□□□□□ -1.47
HMGB1P3-201ENST00000502802 TBCCQ15814 346 aa5.89□□□□□ -1.47
HMGB1P3-201ENST00000502802 TSTQ16762 297 aaKnown RBP5.89□□□□□ -1.47
HMGB1P3-201ENST00000502802 LIPMQ5VYY2 423 aa5.89□□□□□ -1.47
HMGB1P3-201ENST00000502802 TTLL5Q6EMB2 1281 aa5.89□□□□□ -1.47
HMGB1P3-201ENST00000502802 ACSM6Q6P461 480 aa5.89□□□□□ -1.47
HMGB1P3-201ENST00000502802 ARMC8Q8IUR7 673 aa5.89□□□□□ -1.47
HMGB1P3-201ENST00000502802 ANKRD52Q8NB46 1076 aa5.89□□□□□ -1.47
HMGB1P3-201ENST00000502802 MYCBPAPQ8TBZ2 947 aa5.89□□□□□ -1.47
HMGB1P3-201ENST00000502802 SSH3Q8TE77 659 aa5.89□□□□□ -1.47
HMGB1P3-201ENST00000502802 TBC1D22AQ8WUA7 517 aa5.89□□□□□ -1.47
HMGB1P3-201ENST00000502802 FKBP10Q96AY3 582 aa5.89□□□□□ -1.47
HMGB1P3-201ENST00000502802 PTCD3Q96EY7 689 aaKnown RBP5.89□□□□□ -1.47
HMGB1P3-201ENST00000502802 APOPT1Q96IL0 206 aa5.89□□□□□ -1.47
HMGB1P3-201ENST00000502802 WWC2-AS2Q96NR7 200 aa5.89□□□□□ -1.47
HMGB1P3-201ENST00000502802 PRDM13Q9H4Q3 707 aa5.89□□□□□ -1.47
HMGB1P3-201ENST00000502802 SLC12A4Q9UP95 1085 aa5.89□□□□□ -1.47
HMGB1P3-201ENST00000502802 SH2B3Q9UQQ2 575 aa5.89□□□□□ -1.47
HMGB1P3-201ENST00000502802 RCE1Q9Y256 329 aa5.89□□□□□ -1.47
HMGB1P3-201ENST00000502802 CCDC187A0A096LP49 1063 aa5.88□□□□□ -1.47
HMGB1P3-201ENST00000502802 PEX12O00623 359 aa5.88□□□□□ -1.47
HMGB1P3-201ENST00000502802 ANP32CO43423 234 aa5.88□□□□□ -1.47
HMGB1P3-201ENST00000502802 PROM1O43490 865 aa5.88□□□□□ -1.47
HMGB1P3-201ENST00000502802 GUCY1B2O75343 617 aa5.88□□□□□ -1.47
HMGB1P3-201ENST00000502802 RHOP08100 348 aa5.88□□□□□ -1.47
HMGB1P3-201ENST00000502802 IL6RP08887 468 aaPredicted RBP5.88□□□□□ -1.47
HMGB1P3-201ENST00000502802 CREB1P16220 341 aa5.88□□□□□ -1.47
HMGB1P3-201ENST00000502802 MCM5P33992 734 aa5.88□□□□□ -1.47
HMGB1P3-201ENST00000502802 PNPLA4P41247 253 aa5.88□□□□□ -1.47
HMGB1P3-201ENST00000502802 CCT4P50991 539 aaKnown RBP5.88□□□□□ -1.47
HMGB1P3-201ENST00000502802 CLCN2P51788 898 aa5.88□□□□□ -1.47
HMGB1P3-201ENST00000502802 RCAN1P53805 252 aa5.88□□□□□ -1.47
HMGB1P3-201ENST00000502802 SUMO2P61956 95 aaKnown RBP5.88□□□□□ -1.47
HMGB1P3-201ENST00000502802 RPP30P78346 268 aaKnown RBP5.88□□□□□ -1.47
HMGB1P3-201ENST00000502802 DNASE1L3Q13609 305 aa5.88□□□□□ -1.47
HMGB1P3-201ENST00000502802 FAM187BQ17R55 369 aa5.88□□□□□ -1.47
HMGB1P3-201ENST00000502802 ZNF618Q5T7W0 954 aa5.88□□□□□ -1.47
HMGB1P3-201ENST00000502802 DENND1BQ6P3S1 775 aa5.88□□□□□ -1.47
HMGB1P3-201ENST00000502802 VWA1Q6PCB0 445 aa5.88□□□□□ -1.47
HMGB1P3-201ENST00000502802 C16orf54Q6UWD8 224 aa5.88□□□□□ -1.47
HMGB1P3-201ENST00000502802 C16orf89Q6UX73 402 aa5.88□□□□□ -1.47
HMGB1P3-201ENST00000502802 BRINP3Q76B58 766 aa5.88□□□□□ -1.47
HMGB1P3-201ENST00000502802 R3HCC1LQ7Z5L2 792 aaKnown RBP5.88□□□□□ -1.47
HMGB1P3-201ENST00000502802 CHD1LQ86WJ1 897 aa5.88□□□□□ -1.47
HMGB1P3-201ENST00000502802 LNX2Q8N448 690 aa5.88□□□□□ -1.47
HMGB1P3-201ENST00000502802 GALNT4Q8N4A0 578 aa5.88□□□□□ -1.47
HMGB1P3-201ENST00000502802 NGDNQ8NEJ9 315 aaKnown RBP5.88□□□□□ -1.47
HMGB1P3-201ENST00000502802 TOR1AIP2Q8NFQ8 470 aa5.88□□□□□ -1.47
HMGB1P3-201ENST00000502802 ARRDC3Q96B67 414 aa5.88□□□□□ -1.47
HMGB1P3-201ENST00000502802 PGBD1Q96JS3 809 aa5.88□□□□□ -1.47
HMGB1P3-201ENST00000502802 FUZQ9BT04 418 aa5.88□□□□□ -1.47
HMGB1P3-201ENST00000502802 ALG8Q9BVK2 526 aa5.88□□□□□ -1.47
HMGB1P3-201ENST00000502802 HERC2P3Q9BVR0 1158 aa5.88□□□□□ -1.47
HMGB1P3-201ENST00000502802 ARHGAP39Q9C0H5 1083 aa5.88□□□□□ -1.47
HMGB1P3-201ENST00000502802 CD248Q9HCU0 757 aa5.88□□□□□ -1.47
HMGB1P3-201ENST00000502802 TBCCD1Q9NVR7 557 aa5.88□□□□□ -1.47
HMGB1P3-201ENST00000502802 EHD3Q9NZN3 535 aa5.88□□□□□ -1.47
HMGB1P3-201ENST00000502802 POLG2Q9UHN1 485 aa5.88□□□□□ -1.47
HMGB1P3-201ENST00000502802 CNOT7Q9UIV1 285 aaKnown RBP5.88□□□□□ -1.47
HMGB1P3-201ENST00000502802 GDAQ9Y2T3 454 aa5.88□□□□□ -1.47
HMGB1P3-201ENST00000502802 DCAF1Q9Y4B6 1507 aa5.88□□□□□ -1.47
HMGB1P3-201ENST00000502802 FSD2A1L4K1 749 aa5.87□□□□□ -1.47
HMGB1P3-201ENST00000502802 TMEM200CA6NKL6 621 aa5.87□□□□□ -1.47
HMGB1P3-201ENST00000502802 CA12O43570 354 aa5.87□□□□□ -1.47
HMGB1P3-201ENST00000502802 SPDEFO95238 335 aa5.87□□□□□ -1.47
HMGB1P3-201ENST00000502802 ITGB3P05106 788 aa5.87□□□□□ -1.47
HMGB1P3-201ENST00000502802 C8AP07357 584 aa5.87□□□□□ -1.47
HMGB1P3-201ENST00000502802 CYP3A4P08684 503 aa5.87□□□□□ -1.47
HMGB1P3-201ENST00000502802 TNNT1P13805 278 aa5.87□□□□□ -1.47
HMGB1P3-201ENST00000502802 ZNF37AP17032 561 aaPredicted RBP5.87□□□□□ -1.47
HMGB1P3-201ENST00000502802 LAG3P18627 525 aa5.87□□□□□ -1.47
HMGB1P3-201ENST00000502802 CHMP24386 653 aa5.87□□□□□ -1.47
HMGB1P3-201ENST00000502802 IGHMBP2P38935 993 aaKnown RBP5.87□□□□□ -1.47
HMGB1P3-201ENST00000502802 PAFAH1B1P43034 410 aa5.87□□□□□ -1.47
HMGB1P3-201ENST00000502802 CCR9P51686 369 aa5.87□□□□□ -1.47
HMGB1P3-201ENST00000502802 TLE3Q04726 772 aa5.87□□□□□ -1.47
HMGB1P3-201ENST00000502802 DEUP1Q05D60 604 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms