RNA–Protein interactions for RNA: ENST00000502575.1

PDE4D-209, Transcript of phosphodiesterase 4D, humanhuman

TSL 1 (best) BASIC

Gene PDE4D, Length 1,040 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-209ENST00000502575 ATL3Q6DD88 541 aa9.28□□□□□ -0.92
PDE4D-209ENST00000502575 FSTL4Q6MZW2 842 aa9.28□□□□□ -0.92
PDE4D-209ENST00000502575 ADAMTSL4Q6UY14 1074 aa9.28□□□□□ -0.92
PDE4D-209ENST00000502575 C4orf50Q6ZRC1 276 aa9.28□□□□□ -0.92
PDE4D-209ENST00000502575 DPH6Q7L8W6 267 aa9.28□□□□□ -0.92
PDE4D-209ENST00000502575 ARL14EPQ8N8R7 260 aaPredicted RBP9.28□□□□□ -0.92
PDE4D-209ENST00000502575 MYCBPAPQ8TBZ2 947 aa9.28□□□□□ -0.92
PDE4D-209ENST00000502575 EZH1Q92800 747 aaPredicted RBP9.28□□□□□ -0.92
PDE4D-209ENST00000502575 MSANTD3Q96H12 275 aa9.28□□□□□ -0.92
PDE4D-209ENST00000502575 FUBP3Q96I24 572 aaKnown RBP eCLIP9.28□□□□□ -0.92
PDE4D-209ENST00000502575 SPATA32Q96LK8 384 aa9.28□□□□□ -0.92
PDE4D-209ENST00000502575 KCTD10Q9H3F6 313 aa9.28□□□□□ -0.92
PDE4D-209ENST00000502575 GOLPH3LQ9H4A5 285 aa9.28□□□□□ -0.92
PDE4D-209ENST00000502575 PARD6AQ9NPB6 346 aa9.28□□□□□ -0.92
PDE4D-209ENST00000502575 EXOC1Q9NV70 894 aa9.28□□□□□ -0.92
PDE4D-209ENST00000502575 GCNT4Q9P109 453 aa9.28□□□□□ -0.92
PDE4D-209ENST00000502575 NCDNQ9UBB6 729 aa9.28□□□□□ -0.92
PDE4D-209ENST00000502575 MAGEC2Q9UBF1 373 aaPredicted RBP9.28□□□□□ -0.92
PDE4D-209ENST00000502575 HMGXB4Q9UGU5 601 aa9.28□□□□□ -0.92
PDE4D-209ENST00000502575 CFAP45Q9UL16 551 aa9.28□□□□□ -0.92
PDE4D-209ENST00000502575 R3HCC1Q9Y3T6 440 aaKnown RBP9.28□□□□□ -0.92
PDE4D-209ENST00000502575 CACNA1BQ00975 2339 aa9.28□□□□□ -0.92
PDE4D-209ENST00000502575 TMEM131Q92545 1883 aa9.28□□□□□ -0.92
PDE4D-209ENST00000502575 CACNA1EQ15878 2313 aa9.27□□□□□ -0.92
PDE4D-209ENST00000502575 TRAV19A0A0A6YYK7 116 aa9.27□□□□□ -0.93
PDE4D-209ENST00000502575 F8VP50 259 aa9.27□□□□□ -0.93
PDE4D-209ENST00000502575 SART1O43290 800 aaKnown RBP9.27□□□□□ -0.93
PDE4D-209ENST00000502575 TACC1O75410 805 aa9.27□□□□□ -0.93
PDE4D-209ENST00000502575 CLSTN1O94985 981 aa9.27□□□□□ -0.93
PDE4D-209ENST00000502575 EGFP01133 1207 aa9.27□□□□□ -0.93
PDE4D-209ENST00000502575 RPN1P04843 607 aaKnown RBP9.27□□□□□ -0.93
PDE4D-209ENST00000502575 CMA1P23946 247 aa9.27□□□□□ -0.93
PDE4D-209ENST00000502575 GJA4P35212 333 aa9.27□□□□□ -0.93
PDE4D-209ENST00000502575 GNL1P36915 607 aaPredicted RBP9.27□□□□□ -0.93
PDE4D-209ENST00000502575 CXCL12P48061 93 aa9.27□□□□□ -0.93
PDE4D-209ENST00000502575 PXNP49023 591 aaPredicted RBP9.27□□□□□ -0.93
PDE4D-209ENST00000502575 TNNC1P63316 161 aa9.27□□□□□ -0.93
PDE4D-209ENST00000502575 FAM160A1Q05DH4 1040 aa9.27□□□□□ -0.93
PDE4D-209ENST00000502575 IFRD2Q12894 506 aaPredicted RBP9.27□□□□□ -0.93
PDE4D-209ENST00000502575 BIRC3Q13489 604 aa9.27□□□□□ -0.93
PDE4D-209ENST00000502575 ZNF268Q14587 947 aaPredicted RBP9.27□□□□□ -0.93
PDE4D-209ENST00000502575 NUMA1Q14980 2115 aa9.27□□□□□ -0.93
PDE4D-209ENST00000502575 C1orf220Q5T0J3 134 aa9.27□□□□□ -0.93
PDE4D-209ENST00000502575 SPOPLQ6IQ16 392 aa9.27□□□□□ -0.93
PDE4D-209ENST00000502575 VSTM1Q6UX27 236 aa9.27□□□□□ -0.93
PDE4D-209ENST00000502575 SPEM1Q8N4L4 309 aa9.27□□□□□ -0.93
PDE4D-209ENST00000502575 OR6B3Q8NGW1 331 aa9.27□□□□□ -0.93
PDE4D-209ENST00000502575 SH3RF2Q8TEC5 729 aa9.27□□□□□ -0.93
PDE4D-209ENST00000502575 PARD3BQ8TEW8 1205 aa9.27□□□□□ -0.93
PDE4D-209ENST00000502575 SPATA17Q96L03 361 aa9.27□□□□□ -0.93
PDE4D-209ENST00000502575 PSMG3-AS1Q96PY0 264 aa9.27□□□□□ -0.93
PDE4D-209ENST00000502575 B3GNT5Q9BYG0 378 aa9.27□□□□□ -0.93
PDE4D-209ENST00000502575 SNX25Q9H3E2 840 aa9.27□□□□□ -0.93
PDE4D-209ENST00000502575 KIF9Q9HAQ2 790 aa9.27□□□□□ -0.93
PDE4D-209ENST00000502575 DMAC2Q9NW81 257 aa9.27□□□□□ -0.93
PDE4D-209ENST00000502575 THG1LQ9NWX6 298 aaKnown RBP9.27□□□□□ -0.93
PDE4D-209ENST00000502575 UXTQ9UBK9 157 aaPredicted RBP9.27□□□□□ -0.93
PDE4D-209ENST00000502575 MAPK8IP1Q9UQF2 711 aa9.27□□□□□ -0.93
PDE4D-209ENST00000502575 A8MXQ7 604 aa9.26□□□□□ -0.93
PDE4D-209ENST00000502575 FZD6O60353 706 aa9.26□□□□□ -0.93
PDE4D-209ENST00000502575 C4BPAP04003 597 aaKnown RBP9.26□□□□□ -0.93
PDE4D-209ENST00000502575 NR3C1P04150 777 aa9.26□□□□□ -0.93
PDE4D-209ENST00000502575 USP17L7P0C7H9 530 aa9.26□□□□□ -0.93
PDE4D-209ENST00000502575 PTPN1P18031 435 aaKnown RBP9.26□□□□□ -0.93
PDE4D-209ENST00000502575 TGM1P22735 817 aa9.26□□□□□ -0.93
PDE4D-209ENST00000502575 SNRPFP62306 86 aaKnown RBP9.26□□□□□ -0.93
PDE4D-209ENST00000502575 TRPC3Q13507 836 aa9.26□□□□□ -0.93
PDE4D-209ENST00000502575 ZNF699Q32M78 642 aa9.26□□□□□ -0.93
PDE4D-209ENST00000502575 TMEM196Q5HYL7 178 aa9.26□□□□□ -0.93
PDE4D-209ENST00000502575 DGKKQ5KSL6 1271 aa9.26□□□□□ -0.93
PDE4D-209ENST00000502575 PRR23BQ6ZRT6 265 aa9.26□□□□□ -0.93
PDE4D-209ENST00000502575 DENND5BQ6ZUT9 1274 aa9.26□□□□□ -0.93
PDE4D-209ENST00000502575 PAQR9Q6ZVX9 377 aa9.26□□□□□ -0.93
PDE4D-209ENST00000502575 B3GALNT2Q8NCR0 500 aa9.26□□□□□ -0.93
PDE4D-209ENST00000502575 OSCP1Q8WVF1 389 aa9.26□□□□□ -0.93
PDE4D-209ENST00000502575 IER2Q9BTL4 223 aa9.26□□□□□ -0.93
PDE4D-209ENST00000502575 TTLL2Q9BWV7 592 aa9.26□□□□□ -0.93
PDE4D-209ENST00000502575 KRTAP4-8Q9BYQ9 185 aa9.26□□□□□ -0.93
PDE4D-209ENST00000502575 RNF38Q9H0F5 515 aa9.26□□□□□ -0.93
PDE4D-209ENST00000502575 LINC00597Q9H2U6 94 aa9.26□□□□□ -0.93
PDE4D-209ENST00000502575 ECT2Q9H8V3 914 aa9.26□□□□□ -0.93
PDE4D-209ENST00000502575 PCMTD2Q9NV79 361 aa9.26□□□□□ -0.93
PDE4D-209ENST00000502575 SMPD4Q9NXE4 827 aa9.26□□□□□ -0.93
PDE4D-209ENST00000502575 CGNQ9P2M7 1197 aaKnown RBP9.26□□□□□ -0.93
PDE4D-209ENST00000502575 ZMYM5Q9UJ78 669 aa9.26□□□□□ -0.93
PDE4D-209ENST00000502575 CFAP47Q6ZTR5 3102 aa9.26□□□□□ -0.93
PDE4D-209ENST00000502575 DOCK9Q9BZ29 2069 aa9.25□□□□□ -0.93
PDE4D-209ENST00000502575 MUC22E2RYF6 1773 aaPredicted RBP9.25□□□□□ -0.93
PDE4D-209ENST00000502575 KNL1Q8NG31 2342 aa9.25□□□□□ -0.93
PDE4D-209ENST00000502575 CHD6Q8TD26 2715 aa9.25□□□□□ -0.93
PDE4D-209ENST00000502575 FAM237AA0A1B0GTK4 181 aa9.25□□□□□ -0.93
PDE4D-209ENST00000502575 ZNF840PA6NDX5 716 aa9.25□□□□□ -0.93
PDE4D-209ENST00000502575 A6NHS1 94 aa9.25□□□□□ -0.93
PDE4D-209ENST00000502575 TRDMT1O14717 391 aaKnown RBP9.25□□□□□ -0.93
PDE4D-209ENST00000502575 EREGO14944 169 aa9.25□□□□□ -0.93
PDE4D-209ENST00000502575 PAPSS2O95340 614 aaPredicted RBP9.25□□□□□ -0.93
PDE4D-209ENST00000502575 ABL1P00519 1130 aa9.25□□□□□ -0.93
PDE4D-209ENST00000502575 TRIM49P0CI25 452 aa9.25□□□□□ -0.93
PDE4D-209ENST00000502575 TRIM49CP0CI26 452 aa9.25□□□□□ -0.93
PDE4D-209ENST00000502575 PDIA4P13667 645 aaKnown RBP9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms