RNA–Protein interactions for RNA: ENST00000497960.5

NUP50-219, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 986 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-219ENST00000497960 GPD2P43304 727 aa16.01■□□□□ 0.15
NUP50-219ENST00000497960 DGKGP49619 791 aa16.01■□□□□ 0.15
NUP50-219ENST00000497960 TRIP4Q15650 581 aaPredicted RBP16.01■□□□□ 0.15
NUP50-219ENST00000497960 MEA1Q16626 185 aa16.01■□□□□ 0.15
NUP50-219ENST00000497960 SMYD5Q6GMV2 418 aa16.01■□□□□ 0.15
NUP50-219ENST00000497960 APTXQ7Z2E3 356 aaKnown RBP16.01■□□□□ 0.15
NUP50-219ENST00000497960 ZNF513Q8N8E2 541 aaPredicted RBP16.01■□□□□ 0.15
NUP50-219ENST00000497960 MIS12Q9H081 205 aa16.01■□□□□ 0.15
NUP50-219ENST00000497960 POLMQ9NP87 494 aaPredicted RBP16.01■□□□□ 0.15
NUP50-219ENST00000497960 PLK2Q9NYY3 685 aa16.01■□□□□ 0.15
NUP50-219ENST00000497960 SFMBT1Q9UHJ3 866 aa16.01■□□□□ 0.15
NUP50-219ENST00000497960 SPTBN4Q9H254 2564 aa16.01■□□□□ 0.15
NUP50-219ENST00000497960 ANTXRLA6NF34 631 aa16■□□□□ 0.15
NUP50-219ENST00000497960 SGK1O00141 431 aa16■□□□□ 0.15
NUP50-219ENST00000497960 TRIM24O15164 1050 aa16■□□□□ 0.15
NUP50-219ENST00000497960 GABBR2O75899 941 aa16■□□□□ 0.15
NUP50-219ENST00000497960 LTFP02788 710 aa16■□□□□ 0.15
NUP50-219ENST00000497960 APBA1Q02410 837 aa16■□□□□ 0.15
NUP50-219ENST00000497960 SYCP1Q15431 976 aa16■□□□□ 0.15
NUP50-219ENST00000497960 ANO7Q6IWH7 933 aa16■□□□□ 0.15
NUP50-219ENST00000497960 DENND1BQ6P3S1 775 aa16■□□□□ 0.15
NUP50-219ENST00000497960 CPXM2Q8N436 756 aa16■□□□□ 0.15
NUP50-219ENST00000497960 FAM160A2Q8N612 972 aaPredicted RBP16■□□□□ 0.15
NUP50-219ENST00000497960 STK32AQ8WU08 396 aa16■□□□□ 0.15
NUP50-219ENST00000497960 SHC3Q92529 594 aa16■□□□□ 0.15
NUP50-219ENST00000497960 DNAJC12Q9UKB3 198 aa16■□□□□ 0.15
NUP50-219ENST00000497960 USP18Q9UMW8 372 aa16■□□□□ 0.15
NUP50-219ENST00000497960 SPAG17Q6Q759 2223 aa16■□□□□ 0.15
NUP50-219ENST00000497960 CEP250Q9BV73 2442 aa15.99■□□□□ 0.15
NUP50-219ENST00000497960 CFAP54Q96N23 3096 aa15.99■□□□□ 0.15
NUP50-219ENST00000497960 A0A1B0GTH6 734 aa15.99■□□□□ 0.15
NUP50-219ENST00000497960 LRRC10BA6NIK2 292 aa15.99■□□□□ 0.15
NUP50-219ENST00000497960 LRP3O75074 770 aa15.99■□□□□ 0.15
NUP50-219ENST00000497960 PENKP01210 267 aaPredicted RBP15.99■□□□□ 0.15
NUP50-219ENST00000497960 TPM3P06753 285 aa15.99■□□□□ 0.15
NUP50-219ENST00000497960 RPL34P49207 117 aaKnown RBP15.99■□□□□ 0.15
NUP50-219ENST00000497960 UBASH3AP57075 661 aa15.99■□□□□ 0.15
NUP50-219ENST00000497960 PTK2Q05397 1052 aa15.99■□□□□ 0.15
NUP50-219ENST00000497960 USP39Q53GS9 565 aaKnown RBP15.99■□□□□ 0.15
NUP50-219ENST00000497960 SDE2Q6IQ49 451 aa15.99■□□□□ 0.15
NUP50-219ENST00000497960 MSANTD2Q6P1R3 559 aa15.99■□□□□ 0.15
NUP50-219ENST00000497960 GAS2L3Q86XJ1 694 aa15.99■□□□□ 0.15
NUP50-219ENST00000497960 SCUBE3Q8IX30 993 aa15.99■□□□□ 0.15
NUP50-219ENST00000497960 CLEC4CQ8WTT0 213 aa15.99■□□□□ 0.15
NUP50-219ENST00000497960 DDI1Q8WTU0 396 aa15.99■□□□□ 0.15
NUP50-219ENST00000497960 FAM149B1Q96BN6 582 aa15.99■□□□□ 0.15
NUP50-219ENST00000497960 LOXL4Q96JB6 756 aa15.99■□□□□ 0.15
NUP50-219ENST00000497960 TRIM62Q9BVG3 475 aa15.99■□□□□ 0.15
NUP50-219ENST00000497960 RBSNQ9H1K0 784 aa15.99■□□□□ 0.15
NUP50-219ENST00000497960 SIX2Q9NPC8 291 aa15.99■□□□□ 0.15
NUP50-219ENST00000497960 RTN4Q9NQC3 1192 aaKnown RBP15.99■□□□□ 0.15
NUP50-219ENST00000497960 IFNKQ9P0W0 207 aa15.99■□□□□ 0.15
NUP50-219ENST00000497960 STARD13Q9Y3M8 1113 aa15.99■□□□□ 0.15
NUP50-219ENST00000497960 ZBTB24O43167 697 aaPredicted RBP15.98■□□□□ 0.15
NUP50-219ENST00000497960 TEX33O43247 280 aa15.98■□□□□ 0.15
NUP50-219ENST00000497960 MSI1O43347 362 aaKnown RBP15.98■□□□□ 0.15
NUP50-219ENST00000497960 CBFA2T2O43439 604 aa15.98■□□□□ 0.15
NUP50-219ENST00000497960 LATS1O95835 1130 aa15.98■□□□□ 0.15
NUP50-219ENST00000497960 CISD3P0C7P0 127 aa15.98■□□□□ 0.15
NUP50-219ENST00000497960 CHRM1P11229 460 aaPredicted RBP15.98■□□□□ 0.15
NUP50-219ENST00000497960 NCAM1P13591 858 aa15.98■□□□□ 0.15
NUP50-219ENST00000497960 NTSR1P30989 418 aa15.98■□□□□ 0.15
NUP50-219ENST00000497960 KLK7P49862 253 aa15.98■□□□□ 0.15
NUP50-219ENST00000497960 LMNB2Q03252 620 aa15.98■□□□□ 0.15
NUP50-219ENST00000497960 SPEM2Q0P670 501 aa15.98■□□□□ 0.15
NUP50-219ENST00000497960 KCNMA1Q12791 1236 aa15.98■□□□□ 0.15
NUP50-219ENST00000497960 FYB2Q5VWT5 728 aa15.98■□□□□ 0.15
NUP50-219ENST00000497960 NUGGCQ68CJ6 796 aa15.98■□□□□ 0.15
NUP50-219ENST00000497960 TMEM92Q6UXU6 159 aa15.98■□□□□ 0.15
NUP50-219ENST00000497960 TOGARAM2Q6ZUX3 1019 aa15.98■□□□□ 0.15
NUP50-219ENST00000497960 KBTBD6Q86V97 674 aa15.98■□□□□ 0.15
NUP50-219ENST00000497960 C11orf74Q86VG3 221 aa15.98■□□□□ 0.15
NUP50-219ENST00000497960 RASSF3Q86WH2 238 aa15.98■□□□□ 0.15
NUP50-219ENST00000497960 UNC45BQ8IWX7 931 aa15.98■□□□□ 0.15
NUP50-219ENST00000497960 NEK11Q8NG66 645 aa15.98■□□□□ 0.15
NUP50-219ENST00000497960 NAP1L5Q96NT1 182 aaPredicted RBP15.98■□□□□ 0.15
NUP50-219ENST00000497960 ERGIC2Q96RQ1 377 aa15.98■□□□□ 0.15
NUP50-219ENST00000497960 SLC4A5Q9BY07 1137 aa15.98■□□□□ 0.15
NUP50-219ENST00000497960 ZDHHC4Q9NPG8 344 aa15.98■□□□□ 0.15
NUP50-219ENST00000497960 ACP6Q9NPH0 428 aa15.98■□□□□ 0.15
NUP50-219ENST00000497960 FAM207AQ9NSI2 230 aaPredicted RBP15.98■□□□□ 0.15
NUP50-219ENST00000497960 BCCIPQ9P287 314 aaKnown RBP eCLIP15.98■□□□□ 0.15
NUP50-219ENST00000497960 FBXO10Q9UK96 956 aa15.98■□□□□ 0.15
NUP50-219ENST00000497960 SLC27A6Q9Y2P4 619 aa15.98■□□□□ 0.15
NUP50-219ENST00000497960 ZNF292O60281 2723 aa15.98■□□□□ 0.15
NUP50-219ENST00000497960 KIAA1549LQ6ZVL6 1849 aa15.97■□□□□ 0.15
NUP50-219ENST00000497960 PRRT4C9JH25 899 aa15.97■□□□□ 0.15
NUP50-219ENST00000497960 ADAM23O75077 832 aa15.97■□□□□ 0.15
NUP50-219ENST00000497960 RHOBTB1O94844 696 aa15.97■□□□□ 0.15
NUP50-219ENST00000497960 GBP1P32455 592 aa15.97■□□□□ 0.15
NUP50-219ENST00000497960 ID4P47928 161 aa15.97■□□□□ 0.15
NUP50-219ENST00000497960 SLC11A2P49281 568 aa15.97■□□□□ 0.15
NUP50-219ENST00000497960 TBX4P57082 545 aa15.97■□□□□ 0.15
NUP50-219ENST00000497960 BPIFB4P59827 614 aa15.97■□□□□ 0.15
NUP50-219ENST00000497960 RAPGEF1Q13905 1077 aa15.97■□□□□ 0.15
NUP50-219ENST00000497960 ELF2Q15723 593 aa15.97■□□□□ 0.15
NUP50-219ENST00000497960 MPPE1Q53F39 396 aa15.97■□□□□ 0.15
NUP50-219ENST00000497960 ADGRF1Q5T601 910 aa15.97■□□□□ 0.15
NUP50-219ENST00000497960 EGFLAMQ63HQ2 1017 aa15.97■□□□□ 0.15
NUP50-219ENST00000497960 TMEM110Q86TL2 294 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms