RNA–Protein interactions for RNA: ENST00000497544.2

CTSD-206, Transcript of cathepsin D, humanhuman

TSL 2

Gene CTSD, Length 783 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-206ENST00000497544 ZDHHC14Q8IZN3 488 aa20.89■□□□□ 0.93
CTSD-206ENST00000497544 CELF5Q8N6W0 485 aaKnown RBP20.89■□□□□ 0.93
CTSD-206ENST00000497544 EMC1Q8N766 993 aa20.89■□□□□ 0.93
CTSD-206ENST00000497544 TTC16Q8NEE8 873 aa20.89■□□□□ 0.93
CTSD-206ENST00000497544 JOSD2Q8TAC2 188 aa20.89■□□□□ 0.93
CTSD-206ENST00000497544 RXFP2Q8WXD0 754 aa20.89■□□□□ 0.93
CTSD-206ENST00000497544 USP13Q92995 863 aaPredicted RBP20.89■□□□□ 0.93
CTSD-206ENST00000497544 E2F7Q96AV8 911 aa20.89■□□□□ 0.93
CTSD-206ENST00000497544 MCEEQ96PE7 176 aa20.89■□□□□ 0.93
CTSD-206ENST00000497544 KLF16Q9BXK1 252 aaPredicted RBP20.89■□□□□ 0.93
CTSD-206ENST00000497544 KIF9Q9HAQ2 790 aa20.89■□□□□ 0.93
CTSD-206ENST00000497544 TRPV4Q9HBA0 871 aa20.89■□□□□ 0.93
CTSD-206ENST00000497544 DLL3Q9NYJ7 618 aa20.89■□□□□ 0.93
CTSD-206ENST00000497544 ARHGAP26Q9UNA1 814 aa20.89■□□□□ 0.93
CTSD-206ENST00000497544 PKD1L2Q7Z442 2459 aa20.89■□□□□ 0.93
CTSD-206ENST00000497544 SPTBN2O15020 2390 aa20.88■□□□□ 0.93
CTSD-206ENST00000497544 TRUB2O95900 331 aaKnown RBP20.88■□□□□ 0.93
CTSD-206ENST00000497544 CYP1A2P05177 515 aa20.88■□□□□ 0.93
CTSD-206ENST00000497544 TMEM253P0C7T8 217 aa20.88■□□□□ 0.93
CTSD-206ENST00000497544 FLT3P36888 993 aa20.88■□□□□ 0.93
CTSD-206ENST00000497544 VIPR2P41587 438 aa20.88■□□□□ 0.93
CTSD-206ENST00000497544 KPNA1P52294 538 aaPredicted RBP20.88■□□□□ 0.93
CTSD-206ENST00000497544 ASTLQ6HA08 431 aaPredicted RBP20.88■□□□□ 0.93
CTSD-206ENST00000497544 DDX42Q86XP3 938 aaKnown RBP eCLIP20.88■□□□□ 0.93
CTSD-206ENST00000497544 DQX1Q8TE96 717 aaKnown RBP20.88■□□□□ 0.93
CTSD-206ENST00000497544 PPP1R9BQ96SB3 815 aa20.88■□□□□ 0.93
CTSD-206ENST00000497544 GKN1Q9NS71 199 aa20.88■□□□□ 0.93
CTSD-206ENST00000497544 LIMD1Q9UGP4 676 aa20.88■□□□□ 0.93
CTSD-206ENST00000497544 LEFTY2O00292 366 aa20.87■□□□□ 0.93
CTSD-206ENST00000497544 HMBSP08397 361 aa20.87■□□□□ 0.93
CTSD-206ENST00000497544 DESP17661 470 aa20.87■□□□□ 0.93
CTSD-206ENST00000497544 GPD1P21695 349 aa20.87■□□□□ 0.93
CTSD-206ENST00000497544 SDC4P31431 198 aa20.87■□□□□ 0.93
CTSD-206ENST00000497544 SULT1E1P49888 294 aa20.87■□□□□ 0.93
CTSD-206ENST00000497544 RPL7AP62424 266 aaKnown RBP20.87■□□□□ 0.93
CTSD-206ENST00000497544 COL9A2Q14055 689 aaPredicted RBP20.87■□□□□ 0.93
CTSD-206ENST00000497544 SLC25A52Q3SY17 297 aa20.87■□□□□ 0.93
CTSD-206ENST00000497544 PPP1R15BQ5SWA1 713 aa20.87■□□□□ 0.93
CTSD-206ENST00000497544 TANGO2Q6ICL3 276 aa20.87■□□□□ 0.93
CTSD-206ENST00000497544 ST13P5Q8NFI4 369 aaPredicted RBP20.87■□□□□ 0.93
CTSD-206ENST00000497544 SH3RF2Q8TEC5 729 aa20.87■□□□□ 0.93
CTSD-206ENST00000497544 NXPE3Q969Y0 559 aa20.87■□□□□ 0.93
CTSD-206ENST00000497544 ARHGEF26Q96DR7 871 aa20.87■□□□□ 0.93
CTSD-206ENST00000497544 SERPINB11Q96P15 392 aa20.87■□□□□ 0.93
CTSD-206ENST00000497544 SMOC2Q9H3U7 446 aa20.87■□□□□ 0.93
CTSD-206ENST00000497544 FAM204AQ9H8W3 233 aa20.87■□□□□ 0.93
CTSD-206ENST00000497544 CTTNBP2NLQ9P2B4 639 aa20.87■□□□□ 0.93
CTSD-206ENST00000497544 CCL26Q9Y258 94 aa20.87■□□□□ 0.93
CTSD-206ENST00000497544 HBS1LQ9Y450 684 aaKnown RBP20.87■□□□□ 0.93
CTSD-206ENST00000497544 NUP210Q8TEM1 1887 aaPredicted RBP20.87■□□□□ 0.93
CTSD-206ENST00000497544 TMEM191CA6NGB0 347 aa20.86■□□□□ 0.93
CTSD-206ENST00000497544 C2CD4BA6NLJ0 364 aa20.86■□□□□ 0.93
CTSD-206ENST00000497544 HEPACAM2A8MVW5 462 aa20.86■□□□□ 0.93
CTSD-206ENST00000497544 M0QYT0 321 aa20.86■□□□□ 0.93
CTSD-206ENST00000497544 PRAMEF12O95522 483 aa20.86■□□□□ 0.93
CTSD-206ENST00000497544 IRF1P10914 325 aa20.86■□□□□ 0.93
CTSD-206ENST00000497544 PARM1Q6UWI2 310 aa20.86■□□□□ 0.93
CTSD-206ENST00000497544 KIAA1328Q86T90 577 aa20.86■□□□□ 0.93
CTSD-206ENST00000497544 TAC4Q86UU9 113 aa20.86■□□□□ 0.93
CTSD-206ENST00000497544 TXLNBQ8N3L3 684 aa20.86■□□□□ 0.93
CTSD-206ENST00000497544 ACRBPQ8NEB7 543 aa20.86■□□□□ 0.93
CTSD-206ENST00000497544 ADAM32Q8TC27 787 aa20.86■□□□□ 0.93
CTSD-206ENST00000497544 ELSPBP1Q96BH3 223 aa20.86■□□□□ 0.93
CTSD-206ENST00000497544 CFAP57Q96MR6 1250 aa20.86■□□□□ 0.93
CTSD-206ENST00000497544 NPY6RQ99463 290 aa20.86■□□□□ 0.93
CTSD-206ENST00000497544 KXD1Q9BQD3 176 aa20.86■□□□□ 0.93
CTSD-206ENST00000497544 NUP85Q9BW27 656 aa20.86■□□□□ 0.93
CTSD-206ENST00000497544 DDIT4Q9NX09 232 aa20.86■□□□□ 0.93
CTSD-206ENST00000497544 OBP2AQ9NY56 170 aa20.86■□□□□ 0.93
CTSD-206ENST00000497544 SH3BP1Q9Y3L3 701 aa20.86■□□□□ 0.93
CTSD-206ENST00000497544 SYNJ2BP-COX16A0A087WUM0 186 aa20.85■□□□□ 0.93
CTSD-206ENST00000497544 ANHXE9PGG2 379 aa20.85■□□□□ 0.93
CTSD-206ENST00000497544 ECI2O75521 394 aa20.85■□□□□ 0.93
CTSD-206ENST00000497544 F9P00740 461 aa20.85■□□□□ 0.93
CTSD-206ENST00000497544 TBX4P57082 545 aa20.85■□□□□ 0.93
CTSD-206ENST00000497544 CCZ1BP86790 482 aa20.85■□□□□ 0.93
CTSD-206ENST00000497544 CCZ1P86791 482 aaPredicted RBP20.85■□□□□ 0.93
CTSD-206ENST00000497544 NME3Q13232 169 aa20.85■□□□□ 0.93
CTSD-206ENST00000497544 TRIP4Q15650 581 aaPredicted RBP20.85■□□□□ 0.93
CTSD-206ENST00000497544 CCDC14Q49A88 953 aa20.85■□□□□ 0.93
CTSD-206ENST00000497544 TRNP1Q6NT89 227 aa20.85■□□□□ 0.93
CTSD-206ENST00000497544 SND1Q7KZF4 910 aaKnown RBP eCLIP20.85■□□□□ 0.934e-38■■■■■ 36.7
CTSD-206ENST00000497544 BPIFB1Q8TDL5 484 aa20.85■□□□□ 0.93
CTSD-206ENST00000497544 FGF14Q92915 247 aa20.85■□□□□ 0.93
CTSD-206ENST00000497544 RNF34Q969K3 372 aa20.85■□□□□ 0.93
CTSD-206ENST00000497544 ZFRQ96KR1 1074 aaKnown RBP20.85■□□□□ 0.93
CTSD-206ENST00000497544 TBCBQ99426 244 aa20.85■□□□□ 0.93
CTSD-206ENST00000497544 TMEM51Q9NW97 253 aa20.85■□□□□ 0.93
CTSD-206ENST00000497544 THG1LQ9NWX6 298 aaKnown RBP20.85■□□□□ 0.93
CTSD-206ENST00000497544 COX16Q9P0S2 106 aa20.85■□□□□ 0.93
CTSD-206ENST00000497544 CFAP97Q9P2B7 532 aa20.85■□□□□ 0.93
CTSD-206ENST00000497544 IGSF9Q9P2J2 1179 aa20.85■□□□□ 0.93
CTSD-206ENST00000497544 UVRAGQ9P2Y5 699 aa20.85■□□□□ 0.93
CTSD-206ENST00000497544 LSM7Q9UK45 103 aaKnown RBP20.85■□□□□ 0.93
CTSD-206ENST00000497544 TLR6Q9Y2C9 796 aa20.85■□□□□ 0.93
CTSD-206ENST00000497544 NUMBLQ9Y6R0 609 aa20.85■□□□□ 0.93
CTSD-206ENST00000497544 HELZP42694 1942 aaKnown RBP20.84■□□□□ 0.93
CTSD-206ENST00000497544 IRAK2O43187 625 aa20.84■□□□□ 0.93
CTSD-206ENST00000497544 MSI1O43347 362 aaKnown RBP20.84■□□□□ 0.93
CTSD-206ENST00000497544 STC2O76061 302 aa20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms