RNA–Protein interactions for RNA: ENST00000496489.5

NCK1-212, Transcript of NCK adaptor protein 1, humanhuman

TSL 3

Gene NCK1, Length 422 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1-212ENST00000496489 ARHGEF25Q86VW2 580 aa3.22□□□□□ -1.89
NCK1-212ENST00000496489 SUGP1Q8IWZ8 645 aaKnown RBP3.22□□□□□ -1.89
NCK1-212ENST00000496489 FAM71DQ8N9W8 422 aa3.22□□□□□ -1.89
NCK1-212ENST00000496489 SIMC1Q8NDZ2 872 aa3.22□□□□□ -1.89
NCK1-212ENST00000496489 GPR150Q8NGU9 434 aa3.22□□□□□ -1.89
NCK1-212ENST00000496489 OTUD7AQ8TE49 926 aaPredicted RBP3.22□□□□□ -1.89
NCK1-212ENST00000496489 HMGB4Q8WW32 186 aa3.22□□□□□ -1.89
NCK1-212ENST00000496489 PPM1EQ8WY54 764 aa3.22□□□□□ -1.89
NCK1-212ENST00000496489 OVCA2Q8WZ82 227 aa3.22□□□□□ -1.89
NCK1-212ENST00000496489 GOLGA1Q92805 767 aa3.22□□□□□ -1.89
NCK1-212ENST00000496489 DAZAP1Q96EP5 407 aaKnown RBP3.22□□□□□ -1.89
NCK1-212ENST00000496489 FAR2Q96K12 515 aa3.22□□□□□ -1.89
NCK1-212ENST00000496489 TRAPPC9Q96Q05 1148 aa3.22□□□□□ -1.89
NCK1-212ENST00000496489 THAP7Q9BT49 309 aaPredicted RBP3.22□□□□□ -1.89
NCK1-212ENST00000496489 MECRQ9BV79 373 aa3.22□□□□□ -1.89
NCK1-212ENST00000496489 TAF1DQ9H5J8 278 aaPredicted RBP3.22□□□□□ -1.89
NCK1-212ENST00000496489 CCDC134Q9H6E4 229 aa3.22□□□□□ -1.89
NCK1-212ENST00000496489 SEPSECSQ9HD40 501 aaKnown RBP3.22□□□□□ -1.89
NCK1-212ENST00000496489 SAYSD1Q9NPB0 183 aa3.22□□□□□ -1.89
NCK1-212ENST00000496489 TFCP2L1Q9NZI6 479 aa3.22□□□□□ -1.89
NCK1-212ENST00000496489 BCCIPQ9P287 314 aaKnown RBP eCLIP3.22□□□□□ -1.89
NCK1-212ENST00000496489 SRP68Q9UHB9 627 aaKnown RBP3.22□□□□□ -1.89
NCK1-212ENST00000496489 NFU1Q9UMS0 254 aa3.22□□□□□ -1.89
NCK1-212ENST00000496489 CNTN6Q9UQ52 1028 aa3.22□□□□□ -1.89
NCK1-212ENST00000496489 UBE2J1Q9Y385 318 aaPredicted RBP3.22□□□□□ -1.89
NCK1-212ENST00000496489 ENTPD2Q9Y5L3 495 aa3.22□□□□□ -1.89
NCK1-212ENST00000496489 FNDC1Q4ZHG4 1894 aaPredicted RBP3.22□□□□□ -1.89
NCK1-212ENST00000496489 LOC105378220A0A1B0GUY1 285 aaPredicted RBP3.21□□□□□ -1.9
NCK1-212ENST00000496489 GXYLT2A0PJZ3 443 aa3.21□□□□□ -1.9
NCK1-212ENST00000496489 FAM90A18PA6NE21 464 aa3.21□□□□□ -1.9
NCK1-212ENST00000496489 FAM90A16PA6NEW6 464 aa3.21□□□□□ -1.9
NCK1-212ENST00000496489 FAM90A9PA6NNJ1 464 aa3.21□□□□□ -1.9
NCK1-212ENST00000496489 FAM90A5PA8MXJ8 464 aa3.21□□□□□ -1.9
NCK1-212ENST00000496489 H0Y3Z8 333 aa3.21□□□□□ -1.9
NCK1-212ENST00000496489 M0QZQ0 153 aa3.21□□□□□ -1.9
NCK1-212ENST00000496489 GCATO75600 419 aa3.21□□□□□ -1.9
NCK1-212ENST00000496489 SLC3A2P08195 630 aaKnown RBP3.21□□□□□ -1.9
NCK1-212ENST00000496489 FAM90A15PP0C7V4 464 aa3.21□□□□□ -1.9
NCK1-212ENST00000496489 FAM90A14PP0C7W9 464 aa3.21□□□□□ -1.9
NCK1-212ENST00000496489 PEPDP12955 493 aa3.21□□□□□ -1.9
NCK1-212ENST00000496489 APEHP13798 732 aaKnown RBP3.21□□□□□ -1.9
NCK1-212ENST00000496489 MMP8P22894 467 aa3.21□□□□□ -1.9
NCK1-212ENST00000496489 CST5P28325 142 aaPredicted RBP3.21□□□□□ -1.9
NCK1-212ENST00000496489 IGHMBP2P38935 993 aaKnown RBP3.21□□□□□ -1.9
NCK1-212ENST00000496489 DPTQ07507 201 aa3.21□□□□□ -1.9
NCK1-212ENST00000496489 PPFIA1Q13136 1202 aa3.21□□□□□ -1.9
NCK1-212ENST00000496489 KCNB1Q14721 858 aa3.21□□□□□ -1.9
NCK1-212ENST00000496489 TMEM95Q3KNT9 176 aa3.21□□□□□ -1.9
NCK1-212ENST00000496489 ADCK5Q3MIX3 580 aa3.21□□□□□ -1.9
NCK1-212ENST00000496489 TRIM60Q495X7 471 aa3.21□□□□□ -1.9
NCK1-212ENST00000496489 GALNTL6Q49A17 601 aa3.21□□□□□ -1.9
NCK1-212ENST00000496489 ANKRD45Q5TZF3 282 aa3.21□□□□□ -1.9
NCK1-212ENST00000496489 TMEM65Q6PI78 240 aa3.21□□□□□ -1.9
NCK1-212ENST00000496489 C16orf89Q6UX73 402 aa3.21□□□□□ -1.9
NCK1-212ENST00000496489 C2CD5Q86YS7 1000 aa3.21□□□□□ -1.9
NCK1-212ENST00000496489 SMAP1Q8IYB5 467 aaPredicted RBP3.21□□□□□ -1.9
NCK1-212ENST00000496489 TERB1Q8NA31 727 aa3.21□□□□□ -1.9
NCK1-212ENST00000496489 CSGALNACT1Q8TDX6 532 aa3.21□□□□□ -1.9
NCK1-212ENST00000496489 CPT1BQ92523 772 aa3.21□□□□□ -1.9
NCK1-212ENST00000496489 NPIPB3Q92617 1050 aa3.21□□□□□ -1.9
NCK1-212ENST00000496489 RSC1A1Q92681 617 aa3.21□□□□□ -1.9
NCK1-212ENST00000496489 RILPL2Q969X0 211 aa3.21□□□□□ -1.9
NCK1-212ENST00000496489 GCC1Q96CN9 775 aa3.21□□□□□ -1.9
NCK1-212ENST00000496489 REXO5Q96IC2 774 aaKnown RBP3.21□□□□□ -1.9
NCK1-212ENST00000496489 BBC3Q96PG8 261 aaPredicted RBP3.21□□□□□ -1.9
NCK1-212ENST00000496489 AGAP2Q99490 1192 aa3.21□□□□□ -1.9
NCK1-212ENST00000496489 KRTAP9-8Q9BYQ0 159 aa3.21□□□□□ -1.9
NCK1-212ENST00000496489 VPS45Q9NRW7 570 aa3.21□□□□□ -1.9
NCK1-212ENST00000496489 ABHD10Q9NUJ1 306 aa3.21□□□□□ -1.9
NCK1-212ENST00000496489 ADAM21Q9UKJ8 722 aa3.21□□□□□ -1.9
NCK1-212ENST00000496489 RAB21Q9UL25 225 aa3.21□□□□□ -1.9
NCK1-212ENST00000496489 TRPC5Q9UL62 973 aaPredicted RBP3.21□□□□□ -1.9
NCK1-212ENST00000496489 C19orf53Q9UNZ5 99 aaPredicted RBP3.21□□□□□ -1.9
NCK1-212ENST00000496489 GPR52Q9Y2T5 361 aa3.21□□□□□ -1.9
NCK1-212ENST00000496489 DMRT1Q9Y5R6 373 aa3.21□□□□□ -1.9
NCK1-212ENST00000496489 WNT6Q9Y6F9 365 aa3.21□□□□□ -1.9
NCK1-212ENST00000496489 CCDC189A1A4V9 331 aa3.2□□□□□ -1.9
NCK1-212ENST00000496489 SLC38A8A6NNN8 435 aa3.2□□□□□ -1.9
NCK1-212ENST00000496489 EFCAB8A8MWE9 144 aa3.2□□□□□ -1.9
NCK1-212ENST00000496489 KRT38O76015 456 aa3.2□□□□□ -1.9
NCK1-212ENST00000496489 JTBO76095 146 aa3.2□□□□□ -1.9
NCK1-212ENST00000496489 SERPINA4P29622 427 aa3.2□□□□□ -1.9
NCK1-212ENST00000496489 ADD2P35612 726 aa3.2□□□□□ -1.9
NCK1-212ENST00000496489 MAPK9P45984 424 aa3.2□□□□□ -1.9
NCK1-212ENST00000496489 CCT5P48643 541 aa3.2□□□□□ -1.9
NCK1-212ENST00000496489 PTH2RP49190 550 aa3.2□□□□□ -1.9
NCK1-212ENST00000496489 JAK3P52333 1124 aa3.2□□□□□ -1.9
NCK1-212ENST00000496489 ARL4CP56559 192 aa3.2□□□□□ -1.9
NCK1-212ENST00000496489 FAM3BP58499 235 aaPredicted RBP3.2□□□□□ -1.9
NCK1-212ENST00000496489 TAS2R50P59544 299 aa3.2□□□□□ -1.9
NCK1-212ENST00000496489 WDR5P61964 334 aaKnown RBP3.2□□□□□ -1.9
NCK1-212ENST00000496489 PDCLQ13371 301 aa3.2□□□□□ -1.9
NCK1-212ENST00000496489 DNASE1L3Q13609 305 aa3.2□□□□□ -1.9
NCK1-212ENST00000496489 CUL4BQ13620 913 aa3.2□□□□□ -1.9
NCK1-212ENST00000496489 MFSD13AQ14CX5 517 aa3.2□□□□□ -1.9
NCK1-212ENST00000496489 TAF12Q16514 161 aa3.2□□□□□ -1.9
NCK1-212ENST00000496489 FAM187BQ17R55 369 aa3.2□□□□□ -1.9
NCK1-212ENST00000496489 AAK1Q2M2I8 961 aa3.2□□□□□ -1.9
NCK1-212ENST00000496489 HSP90AB4PQ58FF6 505 aa3.2□□□□□ -1.9
NCK1-212ENST00000496489 AWAT1Q58HT5 328 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms