RNA–Protein interactions for RNA: ENST00000494780.1

COL27A1-208, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 4

Gene COL27A1, Length 514 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-208ENST00000494780 SYPP08247 313 aa24.34■■□□□ 1.49
COL27A1-208ENST00000494780 C1QTNF9P0C862 333 aa24.34■■□□□ 1.49
COL27A1-208ENST00000494780 ENPP2Q13822 863 aa24.34■■□□□ 1.49
COL27A1-208ENST00000494780 GEN1Q17RS7 908 aa24.34■■□□□ 1.49
COL27A1-208ENST00000494780 FUT11Q495W5 492 aa24.34■■□□□ 1.49
COL27A1-208ENST00000494780 SYCP2LQ5T4T6 812 aa24.34■■□□□ 1.49
COL27A1-208ENST00000494780 PLD4Q96BZ4 506 aa24.34■■□□□ 1.49
COL27A1-208ENST00000494780 PIWIL1Q96J94 861 aaKnown RBP24.34■■□□□ 1.49
COL27A1-208ENST00000494780 ADAM33Q9BZ11 813 aa24.34■■□□□ 1.49
COL27A1-208ENST00000494780 CD93Q9NPY3 652 aa24.34■■□□□ 1.49
COL27A1-208ENST00000494780 SUSD2Q9UGT4 822 aa24.34■■□□□ 1.49
COL27A1-208ENST00000494780 COQ4Q9Y3A0 265 aa24.34■■□□□ 1.49
COL27A1-208ENST00000494780 PCDH15Q96QU1 1955 aa24.34■■□□□ 1.49
COL27A1-208ENST00000494780 SLC16A3O15427 465 aaKnown RBP24.33■■□□□ 1.49
COL27A1-208ENST00000494780 SPINK2P20155 84 aa24.33■■□□□ 1.49
COL27A1-208ENST00000494780 CD6P30203 668 aa24.33■■□□□ 1.49
COL27A1-208ENST00000494780 IL12RB1P42701 662 aa24.33■■□□□ 1.49
COL27A1-208ENST00000494780 TCERG1LQ5VWI1 586 aa24.33■■□□□ 1.49
COL27A1-208ENST00000494780 ANKS1BQ7Z6G8 1248 aa24.33■■□□□ 1.49
COL27A1-208ENST00000494780 FAM217AQ8IXS0 508 aa24.33■■□□□ 1.49
COL27A1-208ENST00000494780 RGL4Q8IZJ4 473 aa24.33■■□□□ 1.49
COL27A1-208ENST00000494780 MINDY1Q8N5J2 469 aa24.33■■□□□ 1.49
COL27A1-208ENST00000494780 TSG101Q99816 390 aa24.33■■□□□ 1.49
COL27A1-208ENST00000494780 SCNM1Q9BWG6 230 aa24.33■■□□□ 1.49
COL27A1-208ENST00000494780 SLC2A11Q9BYW1 496 aa24.33■■□□□ 1.49
COL27A1-208ENST00000494780 PRDM16Q9HAZ2 1276 aa24.33■■□□□ 1.49
COL27A1-208ENST00000494780 OLA1Q9NTK5 396 aaKnown RBP24.33■■□□□ 1.49
COL27A1-208ENST00000494780 XPO1O14980 1071 aaKnown RBP24.32■■□□□ 1.48
COL27A1-208ENST00000494780 TOP3BO95985 862 aaKnown RBP24.32■■□□□ 1.48
COL27A1-208ENST00000494780 PRCPP42785 496 aa24.32■■□□□ 1.48
COL27A1-208ENST00000494780 BCAT1P54687 386 aa24.32■■□□□ 1.48
COL27A1-208ENST00000494780 PNOCQ13519 176 aa24.32■■□□□ 1.48
COL27A1-208ENST00000494780 CUL2Q13617 745 aa24.32■■□□□ 1.48
COL27A1-208ENST00000494780 EIF4HQ15056 248 aaKnown RBP24.32■■□□□ 1.48
COL27A1-208ENST00000494780 GOLGA7BQ2TAP0 167 aa24.32■■□□□ 1.48
COL27A1-208ENST00000494780 CBWD6Q4V339 395 aa24.32■■□□□ 1.48
COL27A1-208ENST00000494780 COBLL1Q53SF7 1204 aa24.32■■□□□ 1.48
COL27A1-208ENST00000494780 DCAF17Q5H9S7 520 aaPredicted RBP24.32■■□□□ 1.48
COL27A1-208ENST00000494780 CBWD3Q5JTY5 395 aa24.32■■□□□ 1.48
COL27A1-208ENST00000494780 WDR45BQ5MNZ6 344 aa24.32■■□□□ 1.48
COL27A1-208ENST00000494780 CBWD5Q5RIA9 395 aa24.32■■□□□ 1.48
COL27A1-208ENST00000494780 ZC3H3Q8IXZ2 948 aaKnown RBP24.32■■□□□ 1.48
COL27A1-208ENST00000494780 TMEM121BQ9BXQ6 578 aaPredicted RBP24.32■■□□□ 1.48
COL27A1-208ENST00000494780 ULBP1Q9BZM6 244 aa24.32■■□□□ 1.48
COL27A1-208ENST00000494780 ITM2CQ9NQX7 267 aa24.32■■□□□ 1.48
COL27A1-208ENST00000494780 DNAAF2Q9NVR5 837 aaKnown RBP24.32■■□□□ 1.48
COL27A1-208ENST00000494780 ELOVL2Q9NXB9 296 aa24.32■■□□□ 1.48
COL27A1-208ENST00000494780 USP36Q9P275 1121 aaKnown RBP24.32■■□□□ 1.48
COL27A1-208ENST00000494780 TSPAN16Q9UKR8 245 aa24.32■■□□□ 1.48
COL27A1-208ENST00000494780 GNSP15586 552 aa24.31■■□□□ 1.48
COL27A1-208ENST00000494780 YWHAEP62258 255 aaKnown RBP24.31■■□□□ 1.48
COL27A1-208ENST00000494780 FKBP3Q00688 224 aaKnown RBP24.31■■□□□ 1.48
COL27A1-208ENST00000494780 PDE4CQ08493 712 aa24.31■■□□□ 1.48
COL27A1-208ENST00000494780 BST2Q10589 180 aaKnown RBP24.31■■□□□ 1.48
COL27A1-208ENST00000494780 TRIP4Q15650 581 aaPredicted RBP24.31■■□□□ 1.48
COL27A1-208ENST00000494780 SGO2Q562F6 1265 aa24.31■■□□□ 1.48
COL27A1-208ENST00000494780 ZNF658Q5TYW1 1059 aaPredicted RBP24.31■■□□□ 1.48
COL27A1-208ENST00000494780 DDI1Q8WTU0 396 aa24.31■■□□□ 1.48
COL27A1-208ENST00000494780 MKRN2Q9H000 416 aaKnown RBP24.31■■□□□ 1.48
COL27A1-208ENST00000494780 LRRC4Q9HBW1 653 aa24.31■■□□□ 1.48
COL27A1-208ENST00000494780 GDPD2Q9HCC8 539 aa24.31■■□□□ 1.48
COL27A1-208ENST00000494780 WSB2Q9NYS7 404 aaPredicted RBP24.31■■□□□ 1.48
COL27A1-208ENST00000494780 HESX1Q9UBX0 185 aa24.31■■□□□ 1.48
COL27A1-208ENST00000494780 ADAMTS9Q9P2N4 1935 aa24.31■■□□□ 1.48
COL27A1-208ENST00000494780 PCNX2A6NKB5 2137 aa24.31■■□□□ 1.48
COL27A1-208ENST00000494780 TULP2O00295 520 aa24.3■■□□□ 1.48
COL27A1-208ENST00000494780 TIMM44O43615 452 aa24.3■■□□□ 1.48
COL27A1-208ENST00000494780 SYNCRIPO60506 623 aaKnown RBP24.3■■□□□ 1.48
COL27A1-208ENST00000494780 SIM1P81133 766 aaPredicted RBP24.3■■□□□ 1.48
COL27A1-208ENST00000494780 HNRNPDQ14103 355 aaKnown RBP24.3■■□□□ 1.48
COL27A1-208ENST00000494780 PLEKHG6Q3KR16 790 aa24.3■■□□□ 1.48
COL27A1-208ENST00000494780 BHLHA9Q7RTU4 235 aa24.3■■□□□ 1.48
COL27A1-208ENST00000494780 KDF1Q8NAX2 398 aaPredicted RBP24.3■■□□□ 1.48
COL27A1-208ENST00000494780 RBBP8NLQ8NC74 664 aaPredicted RBP24.3■■□□□ 1.48
COL27A1-208ENST00000494780 TOE1Q96GM8 510 aaKnown RBP24.3■■□□□ 1.48
COL27A1-208ENST00000494780 GSDMAQ96QA5 445 aa24.3■■□□□ 1.48
COL27A1-208ENST00000494780 CLEC4EQ9ULY5 219 aa24.3■■□□□ 1.48
COL27A1-208ENST00000494780 HBS1LQ9Y450 684 aaKnown RBP24.3■■□□□ 1.48
COL27A1-208ENST00000494780 NFE2L3Q9Y4A8 694 aa24.3■■□□□ 1.48
COL27A1-208ENST00000494780 SPAARA0A1B0GVQ0 90 aa24.29■■□□□ 1.48
COL27A1-208ENST00000494780 TMEM8BA6NDV4 472 aa24.29■■□□□ 1.48
COL27A1-208ENST00000494780 CD19P15391 556 aa24.29■■□□□ 1.48
COL27A1-208ENST00000494780 OXTRP30559 389 aa24.29■■□□□ 1.48
COL27A1-208ENST00000494780 HARS2P49590 506 aaKnown RBP24.29■■□□□ 1.48
COL27A1-208ENST00000494780 ZNF445P59923 1031 aa24.29■■□□□ 1.48
COL27A1-208ENST00000494780 SLC14A1Q13336 389 aa24.29■■□□□ 1.48
COL27A1-208ENST00000494780 ZNF234Q14588 700 aa24.29■■□□□ 1.48
COL27A1-208ENST00000494780 MPPE1Q53F39 396 aa24.29■■□□□ 1.48
COL27A1-208ENST00000494780 ANKRD40Q6AI12 368 aa24.29■■□□□ 1.48
COL27A1-208ENST00000494780 TMPRSS6Q8IU80 811 aa24.29■■□□□ 1.48
COL27A1-208ENST00000494780 FMNL3Q8IVF7 1028 aa24.29■■□□□ 1.48
COL27A1-208ENST00000494780 FMR1NBQ8N0W7 255 aaPredicted RBP24.29■■□□□ 1.48
COL27A1-208ENST00000494780 NDRG1Q92597 394 aaKnown RBP24.29■■□□□ 1.48
COL27A1-208ENST00000494780 SIPA1Q96FS4 1042 aa24.29■■□□□ 1.48
COL27A1-208ENST00000494780 IPO9Q96P70 1041 aaKnown RBP24.29■■□□□ 1.48
COL27A1-208ENST00000494780 KIAA1257Q9ULG3 409 aa24.29■■□□□ 1.48
COL27A1-208ENST00000494780 NEUROG3Q9Y4Z2 214 aa24.29■■□□□ 1.48
COL27A1-208ENST00000494780 CACNA1EQ15878 2313 aa24.28■■□□□ 1.48
COL27A1-208ENST00000494780 VDRP11473 427 aa24.28■■□□□ 1.48
COL27A1-208ENST00000494780 CD59P13987 128 aa24.28■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 131.3 ms