RNA–Protein interactions for RNA: ENST00000494672.1

CCDC66-222, Transcript of coiled-coil domain containing 66, human

TSL 4

Gene CCDC66, Length 577 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCDC66-222	ENST00000494672	CCDC89	Q8N998	374 aa		5.2	□□□□□ -1.58
CCDC66-222	ENST00000494672	PPM1E	Q8WY54	764 aa		5.2	□□□□□ -1.58
CCDC66-222	ENST00000494672	MAP4K1	Q92918	833 aa		5.2	□□□□□ -1.58
CCDC66-222	ENST00000494672	NMD3	Q96D46	503 aa	Known RBP	5.2	□□□□□ -1.58
CCDC66-222	ENST00000494672	CCDC34	Q96HJ3	373 aa		5.2	□□□□□ -1.58
CCDC66-222	ENST00000494672	CDHR1	Q96JP9	859 aa		5.2	□□□□□ -1.58
CCDC66-222	ENST00000494672	TIGD1	Q96MW7	591 aa		5.2	□□□□□ -1.58
CCDC66-222	ENST00000494672	SIGLEC11	Q96RL6	698 aa		5.2	□□□□□ -1.58
CCDC66-222	ENST00000494672	STK31	Q9BXU1	1019 aa		5.2	□□□□□ -1.58
CCDC66-222	ENST00000494672	C1orf112	Q9NSG2	853 aa		5.2	□□□□□ -1.58
CCDC66-222	ENST00000494672	HDAC9	Q9UKV0	1011 aa		5.2	□□□□□ -1.58
CCDC66-222	ENST00000494672	L1RE1	Q9UN81	338 aa		5.2	□□□□□ -1.58
CCDC66-222	ENST00000494672	RAD50	Q92878	1312 aa		5.2	□□□□□ -1.58
CCDC66-222	ENST00000494672	DYTN	A2CJ06	578 aa		5.19	□□□□□ -1.58
CCDC66-222	ENST00000494672	FRS3	O43559	492 aa		5.19	□□□□□ -1.58
CCDC66-222	ENST00000494672	SPRY2	O43597	315 aa		5.19	□□□□□ -1.58
CCDC66-222	ENST00000494672	PIAS2	O75928	621 aa		5.19	□□□□□ -1.58
CCDC66-222	ENST00000494672	LDHA	P00338	332 aa	Known RBP	5.19	□□□□□ -1.58
CCDC66-222	ENST00000494672	KCNJ4	P48050	445 aa		5.19	□□□□□ -1.58
CCDC66-222	ENST00000494672	PGD	P52209	483 aa		5.19	□□□□□ -1.58
CCDC66-222	ENST00000494672	RBM5	P52756	815 aa	Known RBP eCLIP	5.19	□□□□□ -1.58
CCDC66-222	ENST00000494672	KRTAP10-9	P60411	292 aa		5.19	□□□□□ -1.58
CCDC66-222	ENST00000494672	CFHR3	Q02985	330 aa		5.19	□□□□□ -1.58
CCDC66-222	ENST00000494672	ZNF91	Q05481	1191 aa		5.19	□□□□□ -1.58
CCDC66-222	ENST00000494672	CCDC15	Q0P6D6	951 aa		5.19	□□□□□ -1.58
CCDC66-222	ENST00000494672	TRIM29	Q14134	588 aa		5.19	□□□□□ -1.58
CCDC66-222	ENST00000494672	ZSCAN26	Q16670	478 aa		5.19	□□□□□ -1.58
CCDC66-222	ENST00000494672	LONRF1	Q17RB8	773 aa		5.19	□□□□□ -1.58
CCDC66-222	ENST00000494672	MAP9	Q49MG5	647 aa		5.19	□□□□□ -1.58
CCDC66-222	ENST00000494672	IRF2BP2	Q7Z5L9	587 aa		5.19	□□□□□ -1.58
CCDC66-222	ENST00000494672	FAM184A	Q8NB25	1140 aa		5.19	□□□□□ -1.58
CCDC66-222	ENST00000494672	TDRD7	Q8NHU6	1098 aa	Known RBP	5.19	□□□□□ -1.58
CCDC66-222	ENST00000494672	MAFA	Q8NHW3	353 aa	Predicted RBP	5.19	□□□□□ -1.58
CCDC66-222	ENST00000494672	GADD45GIP1	Q8TAE8	222 aa	Predicted RBP	5.19	□□□□□ -1.58
CCDC66-222	ENST00000494672	TBC1D22A	Q8WUA7	517 aa		5.19	□□□□□ -1.58
CCDC66-222	ENST00000494672	NSMCE1	Q8WV22	266 aa		5.19	□□□□□ -1.58
CCDC66-222	ENST00000494672	TAF4B	Q92750	862 aa		5.19	□□□□□ -1.58
CCDC66-222	ENST00000494672	KRTAP1-5	Q9BYS1	174 aa		5.19	□□□□□ -1.58
CCDC66-222	ENST00000494672	FAM204A	Q9H8W3	233 aa		5.19	□□□□□ -1.58
CCDC66-222	ENST00000494672	STK32B	Q9NY57	414 aa		5.19	□□□□□ -1.58
CCDC66-222	ENST00000494672	MTMR4	Q9NYA4	1195 aa		5.19	□□□□□ -1.58
CCDC66-222	ENST00000494672	AFF4	Q9UHB7	1163 aa	Known RBP	5.19	□□□□□ -1.58
CCDC66-222	ENST00000494672	LZTS1	Q9Y250	596 aa		5.19	□□□□□ -1.58
CCDC66-222	ENST00000494672	AQP7P3	A6NL99	342 aa		5.18	□□□□□ -1.58
CCDC66-222	ENST00000494672	ADAM10	O14672	748 aa		5.18	□□□□□ -1.58
CCDC66-222	ENST00000494672	PRF1	P14222	555 aa		5.18	□□□□□ -1.58
CCDC66-222	ENST00000494672	XBP1	P17861	261 aa		5.18	□□□□□ -1.58
CCDC66-222	ENST00000494672	RRM1	P23921	792 aa		5.18	□□□□□ -1.58
CCDC66-222	ENST00000494672	TNNT3	P45378	269 aa	Predicted RBP	5.18	□□□□□ -1.58
CCDC66-222	ENST00000494672	ITGA8	P53708	1063 aa		5.18	□□□□□ -1.58
CCDC66-222	ENST00000494672	CHAF1A	Q13111	956 aa	Predicted RBP	5.18	□□□□□ -1.58
CCDC66-222	ENST00000494672	KCNB1	Q14721	858 aa		5.18	□□□□□ -1.58
CCDC66-222	ENST00000494672	CNGA2	Q16280	664 aa		5.18	□□□□□ -1.58
CCDC66-222	ENST00000494672	ZNF750	Q32MQ0	723 aa		5.18	□□□□□ -1.58
CCDC66-222	ENST00000494672	TMTC4	Q5T4D3	741 aa		5.18	□□□□□ -1.58
CCDC66-222	ENST00000494672	JAKMIP3	Q5VZ66	844 aa		5.18	□□□□□ -1.58
CCDC66-222	ENST00000494672	SWSAP1	Q6NVH7	229 aa		5.18	□□□□□ -1.58
CCDC66-222	ENST00000494672	APOA5	Q6Q788	366 aa		5.18	□□□□□ -1.58
CCDC66-222	ENST00000494672	YAF2	Q8IY57	180 aa		5.18	□□□□□ -1.58
CCDC66-222	ENST00000494672	GIMAP1	Q8WWP7	306 aa		5.18	□□□□□ -1.58
CCDC66-222	ENST00000494672	CENPT	Q96BT3	561 aa		5.18	□□□□□ -1.58
CCDC66-222	ENST00000494672	ZNF668	Q96K58	619 aa	Predicted RBP	5.18	□□□□□ -1.58
CCDC66-222	ENST00000494672	MMTAG2	Q9BU76	263 aa	Known RBP	5.18	□□□□□ -1.58
CCDC66-222	ENST00000494672	TSPY26P	Q9H489	355 aa		5.18	□□□□□ -1.58
CCDC66-222	ENST00000494672	FAM83D	Q9H4H8	585 aa		5.18	□□□□□ -1.58
CCDC66-222	ENST00000494672	EBF3	Q9H4W6	596 aa		5.18	□□□□□ -1.58
CCDC66-222	ENST00000494672	COMMD8	Q9NX08	183 aa		5.18	□□□□□ -1.58
CCDC66-222	ENST00000494672	HOXC10	Q9NYD6	342 aa		5.18	□□□□□ -1.58
CCDC66-222	ENST00000494672	NOB1	Q9ULX3	412 aa	Known RBP	5.18	□□□□□ -1.58
CCDC66-222	ENST00000494672	EIF4G1	Q04637	1599 aa	Known RBP	5.17	□□□□□ -1.58
CCDC66-222	ENST00000494672	TMEM110-MUSTN1	A8MSY1	372 aa		5.17	□□□□□ -1.58
CCDC66-222	ENST00000494672		A8MVJ9	347 aa		5.17	□□□□□ -1.58
CCDC66-222	ENST00000494672	CLIC1	O00299	241 aa		5.17	□□□□□ -1.58
CCDC66-222	ENST00000494672	IFRD1	O00458	451 aa	Predicted RBP	5.17	□□□□□ -1.58
CCDC66-222	ENST00000494672	CHL1	O00533	1208 aa		5.17	□□□□□ -1.58
CCDC66-222	ENST00000494672	PRPF3	O43395	683 aa	Known RBP	5.17	□□□□□ -1.58
CCDC66-222	ENST00000494672	INMT	O95050	263 aa		5.17	□□□□□ -1.58
CCDC66-222	ENST00000494672	HSPA5	P11021	654 aa	Known RBP	5.17	□□□□□ -1.58
CCDC66-222	ENST00000494672	HGF	P14210	728 aa		5.17	□□□□□ -1.58
CCDC66-222	ENST00000494672	TPH1	P17752	444 aa		5.17	□□□□□ -1.58
CCDC66-222	ENST00000494672	HOXD9	P28356	352 aa	Predicted RBP	5.17	□□□□□ -1.58
CCDC66-222	ENST00000494672	PIK3CA	P42336	1068 aa		5.17	□□□□□ -1.58
CCDC66-222	ENST00000494672	CPT1A	P50416	773 aa		5.17	□□□□□ -1.58
CCDC66-222	ENST00000494672	CACNB3	P54284	484 aa		5.17	□□□□□ -1.58
CCDC66-222	ENST00000494672	SH3BGR	P55822	239 aa	Predicted RBP	5.17	□□□□□ -1.58
CCDC66-222	ENST00000494672	ID2	Q02363	134 aa		5.17	□□□□□ -1.58
CCDC66-222	ENST00000494672	STK3	Q13188	491 aa		5.17	□□□□□ -1.58
CCDC66-222	ENST00000494672	ARHGAP29	Q52LW3	1261 aa		5.17	□□□□□ -1.58
CCDC66-222	ENST00000494672	AWAT1	Q58HT5	328 aa		5.17	□□□□□ -1.58
CCDC66-222	ENST00000494672	C3orf38	Q5JPI3	329 aa		5.17	□□□□□ -1.58
CCDC66-222	ENST00000494672	FAM102B	Q5T8I3	360 aa		5.17	□□□□□ -1.58
CCDC66-222	ENST00000494672	DEF8	Q6ZN54	512 aa		5.17	□□□□□ -1.58
CCDC66-222	ENST00000494672	ZDHHC17	Q8IUH5	632 aa		5.17	□□□□□ -1.58
CCDC66-222	ENST00000494672	CLASRP	Q8N2M8	674 aa	Known RBP	5.17	□□□□□ -1.58
CCDC66-222	ENST00000494672	C12orf76	Q8N812	135 aa	Predicted RBP	5.17	□□□□□ -1.58
CCDC66-222	ENST00000494672	CCDC191	Q8NCU4	936 aa		5.17	□□□□□ -1.58
CCDC66-222	ENST00000494672	IPCEF1	Q8WWN9	437 aa	Predicted RBP	5.17	□□□□□ -1.58
CCDC66-222	ENST00000494672	JDP2	Q8WYK2	163 aa		5.17	□□□□□ -1.58
CCDC66-222	ENST00000494672	VMP1	Q96GC9	406 aa		5.17	□□□□□ -1.58
CCDC66-222	ENST00000494672	VPS50	Q96JG6	964 aa		5.17	□□□□□ -1.58

Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms