RNA–Protein interactions for RNA: ENST00000494667.5

PRKD3-210, Transcript of protein kinase D3, humanhuman

TSL 1 (best)

Gene PRKD3, Length 4,326 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-210ENST00000494667 SLITRK3O94933 977 aa4.94□□□□□ -1.62
PRKD3-210ENST00000494667 GLDCP23378 1020 aa4.94□□□□□ -1.62
PRKD3-210ENST00000494667 BASP1P80723 227 aaKnown RBP4.94□□□□□ -1.62
PRKD3-210ENST00000494667 MRPS5P82675 430 aaKnown RBP4.94□□□□□ -1.62
PRKD3-210ENST00000494667 KDSRQ06136 332 aa4.94□□□□□ -1.62
PRKD3-210ENST00000494667 SPIRE1Q08AE8 756 aa4.94□□□□□ -1.62
PRKD3-210ENST00000494667 RIPPLY1Q0D2K3 151 aa4.94□□□□□ -1.62
PRKD3-210ENST00000494667 FASTKD3Q14CZ7 662 aaKnown RBP4.94□□□□□ -1.62
PRKD3-210ENST00000494667 CDONQ4KMG0 1287 aa4.94□□□□□ -1.62
PRKD3-210ENST00000494667 FAM47CQ5HY64 1035 aa4.94□□□□□ -1.62
PRKD3-210ENST00000494667 RALGPS1Q5JS13 557 aa4.94□□□□□ -1.62
PRKD3-210ENST00000494667 AARS2Q5JTZ9 985 aaKnown RBP4.94□□□□□ -1.62
PRKD3-210ENST00000494667 ITPRIPL1Q6GPH6 555 aa4.94□□□□□ -1.62
PRKD3-210ENST00000494667 NLRP10Q86W26 655 aa4.94□□□□□ -1.62
PRKD3-210ENST00000494667 GPBP1Q86WP2 473 aa4.94□□□□□ -1.62
PRKD3-210ENST00000494667 FAM20CQ8IXL6 584 aa4.94□□□□□ -1.62
PRKD3-210ENST00000494667 PGAM4Q8N0Y7 254 aa4.94□□□□□ -1.62
PRKD3-210ENST00000494667 SNX31Q8N9S9 440 aa4.94□□□□□ -1.62
PRKD3-210ENST00000494667 PIK3C3Q8NEB9 887 aa4.94□□□□□ -1.62
PRKD3-210ENST00000494667 SLC35B2Q8TB61 432 aa4.94□□□□□ -1.62
PRKD3-210ENST00000494667 SLC7A14Q8TBB6 771 aa4.94□□□□□ -1.62
PRKD3-210ENST00000494667 SHKBP1Q8TBC3 707 aa4.94□□□□□ -1.62
PRKD3-210ENST00000494667 SLC2A14Q8TDB8 520 aa4.94□□□□□ -1.62
PRKD3-210ENST00000494667 CRYGNQ8WXF5 182 aa4.94□□□□□ -1.62
PRKD3-210ENST00000494667 SLC5A5Q92911 643 aa4.94□□□□□ -1.62
PRKD3-210ENST00000494667 CCDC127Q96BQ5 260 aa4.94□□□□□ -1.62
PRKD3-210ENST00000494667 RMDN1Q96DB5 314 aa4.94□□□□□ -1.62
PRKD3-210ENST00000494667 ZNF778Q96MU6 729 aa4.94□□□□□ -1.62
PRKD3-210ENST00000494667 PWWP2AQ96N64 755 aa4.94□□□□□ -1.62
PRKD3-210ENST00000494667 DACH2Q96NX9 599 aa4.94□□□□□ -1.62
PRKD3-210ENST00000494667 PHF12Q96QT6 1004 aa4.94□□□□□ -1.62
PRKD3-210ENST00000494667 CAAP1Q9H8G2 361 aa4.94□□□□□ -1.62
PRKD3-210ENST00000494667 CXorf21Q9HAI6 301 aa4.94□□□□□ -1.62
PRKD3-210ENST00000494667 SCAF8Q9UPN6 1271 aaKnown RBP4.94□□□□□ -1.62
PRKD3-210ENST00000494667 CORINQ9Y5Q5 1042 aa4.94□□□□□ -1.62
PRKD3-210ENST00000494667 TCRBV3S1A0A5B6 114 aa4.94□□□□□ -1.62
PRKD3-210ENST00000494667 ARHGEF37A1IGU5 675 aa4.94□□□□□ -1.62
PRKD3-210ENST00000494667 SMCO2A6NFE2 343 aa4.94□□□□□ -1.62
PRKD3-210ENST00000494667 CLDN25C9JDP6 229 aa4.94□□□□□ -1.62
PRKD3-210ENST00000494667 POC1B-GALNT4F8VUJ3 575 aa4.94□□□□□ -1.62
PRKD3-210ENST00000494667 SHOXO15266 292 aa4.94□□□□□ -1.62
PRKD3-210ENST00000494667 MAPTP10636 758 aaKnown RBP4.94□□□□□ -1.62
PRKD3-210ENST00000494667 UNGP13051 313 aaPredicted RBP4.94□□□□□ -1.62
PRKD3-210ENST00000494667 CNTFP26441 200 aa4.94□□□□□ -1.62
PRKD3-210ENST00000494667 ETV3P41162 512 aa4.94□□□□□ -1.62
PRKD3-210ENST00000494667 HIF1AQ16665 826 aa4.94□□□□□ -1.62
PRKD3-210ENST00000494667 FSCBQ5H9T9 825 aa4.94□□□□□ -1.62
PRKD3-210ENST00000494667 MBLAC2Q68D91 279 aa4.94□□□□□ -1.62
PRKD3-210ENST00000494667 GTF2IRD2BQ6EKJ0 949 aa4.94□□□□□ -1.62
PRKD3-210ENST00000494667 IYDQ6PHW0 289 aa4.94□□□□□ -1.62
PRKD3-210ENST00000494667 USP51Q70EK9 711 aa4.94□□□□□ -1.62
PRKD3-210ENST00000494667 PODNQ7Z5L7 613 aa4.94□□□□□ -1.62
PRKD3-210ENST00000494667 GTF2IRD2Q86UP8 949 aa4.94□□□□□ -1.62
PRKD3-210ENST00000494667 CLVS1Q8IUQ0 354 aaPredicted RBP4.94□□□□□ -1.62
PRKD3-210ENST00000494667 PARP8Q8N3A8 854 aa4.94□□□□□ -1.62
PRKD3-210ENST00000494667 PIWIL2Q8TC59 973 aaKnown RBP4.94□□□□□ -1.62
PRKD3-210ENST00000494667 SLC20A1Q8WUM9 679 aa4.94□□□□□ -1.62
PRKD3-210ENST00000494667 UBXN10Q96LJ8 280 aa4.94□□□□□ -1.62
PRKD3-210ENST00000494667 ZNF512Q96ME7 567 aaPredicted RBP4.94□□□□□ -1.62
PRKD3-210ENST00000494667 PKP2Q99959 881 aa4.94□□□□□ -1.62
PRKD3-210ENST00000494667 GDF15Q99988 308 aa4.94□□□□□ -1.62
PRKD3-210ENST00000494667 EFHD1Q9BUP0 239 aa4.94□□□□□ -1.62
PRKD3-210ENST00000494667 CEP44Q9C0F1 390 aa4.94□□□□□ -1.62
PRKD3-210ENST00000494667 ARMC7Q9H6L4 198 aa4.94□□□□□ -1.62
PRKD3-210ENST00000494667 MRGBPQ9NV56 204 aa4.94□□□□□ -1.62
PRKD3-210ENST00000494667 DNAJC17Q9NVM6 304 aaKnown RBP4.94□□□□□ -1.62
PRKD3-210ENST00000494667 KCND2Q9NZV8 630 aa4.94□□□□□ -1.62
PRKD3-210ENST00000494667 COQ4Q9Y3A0 265 aa4.94□□□□□ -1.62
PRKD3-210ENST00000494667 TCAF1Q9Y4C2 921 aa4.94□□□□□ -1.62
PRKD3-210ENST00000494667 PCDHB4Q9Y5E5 795 aa4.94□□□□□ -1.62
PRKD3-210ENST00000494667 HEMK1Q9Y5R4 338 aaPredicted RBP4.94□□□□□ -1.62
PRKD3-210ENST00000494667 ITGB4P16144 1822 aa4.94□□□□□ -1.62
PRKD3-210ENST00000494667 ARHGEF35A5YM69 484 aa4.94□□□□□ -1.62
PRKD3-210ENST00000494667 TCP10L2B9ZVM9 353 aa4.94□□□□□ -1.62
PRKD3-210ENST00000494667 E9PMD0 336 aa4.94□□□□□ -1.62
PRKD3-210ENST00000494667 XPO1O14980 1071 aaKnown RBP4.94□□□□□ -1.62
PRKD3-210ENST00000494667 BET1O15155 118 aa4.94□□□□□ -1.62
PRKD3-210ENST00000494667 CRYZL1O95825 349 aa4.94□□□□□ -1.62
PRKD3-210ENST00000494667 COX4I1P13073 169 aa4.94□□□□□ -1.62
PRKD3-210ENST00000494667 CYP7A1P22680 504 aa4.94□□□□□ -1.62
PRKD3-210ENST00000494667 LTKP29376 864 aa4.94□□□□□ -1.62
PRKD3-210ENST00000494667 GPD2P43304 727 aa4.94□□□□□ -1.62
PRKD3-210ENST00000494667 MYL7Q01449 175 aa4.94□□□□□ -1.62
PRKD3-210ENST00000494667 DUSP7Q16829 419 aa4.94□□□□□ -1.62
PRKD3-210ENST00000494667 C6orf183Q5T699 404 aa4.94□□□□□ -1.62
PRKD3-210ENST00000494667 TEDDM1Q5T9Z0 273 aa4.94□□□□□ -1.62
PRKD3-210ENST00000494667 TWF2Q6IBS0 349 aaKnown RBP4.94□□□□□ -1.62
PRKD3-210ENST00000494667 CYP4F22Q6NT55 531 aa4.94□□□□□ -1.62
PRKD3-210ENST00000494667 PAOXQ6QHF9 649 aa4.94□□□□□ -1.62
PRKD3-210ENST00000494667 PLEKHG7Q6ZR37 379 aa4.94□□□□□ -1.62
PRKD3-210ENST00000494667 GET4Q7L5D6 327 aaPredicted RBP4.94□□□□□ -1.62
PRKD3-210ENST00000494667 HPS6Q86YV9 775 aa4.94□□□□□ -1.62
PRKD3-210ENST00000494667 LURAP1LQ8IV03 231 aa4.94□□□□□ -1.62
PRKD3-210ENST00000494667 RHOT1Q8IXI2 618 aa4.94□□□□□ -1.62
PRKD3-210ENST00000494667 RCOR2Q8IZ40 523 aa4.94□□□□□ -1.62
PRKD3-210ENST00000494667 TMC2Q8TDI7 906 aa4.94□□□□□ -1.62
PRKD3-210ENST00000494667 SH3YL1Q96HL8 342 aaPredicted RBP4.94□□□□□ -1.62
PRKD3-210ENST00000494667 ACAP3Q96P50 834 aa4.94□□□□□ -1.62
PRKD3-210ENST00000494667 GLT8D2Q9H1C3 349 aa4.94□□□□□ -1.62
PRKD3-210ENST00000494667 LIN28AQ9H9Z2 209 aaKnown RBP4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms