RNA–Protein interactions for RNA: ENST00000494649.5

APTX-230, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 2,099 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-230ENST00000494649 DCNP07585 359 aaKnown RBP11.58□□□□□ -0.56
APTX-230ENST00000494649 CTHP32929 405 aa11.58□□□□□ -0.56
APTX-230ENST00000494649 GJA4P35212 333 aa11.58□□□□□ -0.56
APTX-230ENST00000494649 HARS2P49590 506 aaKnown RBP11.58□□□□□ -0.56
APTX-230ENST00000494649 RPL7AP62424 266 aaKnown RBP11.58□□□□□ -0.56
APTX-230ENST00000494649 CDK17Q00537 523 aa11.58□□□□□ -0.56
APTX-230ENST00000494649 MESP2Q0VG99 397 aa11.58□□□□□ -0.56
APTX-230ENST00000494649 PON2Q15165 354 aa11.58□□□□□ -0.56
APTX-230ENST00000494649 PDGFRLQ15198 375 aa11.58□□□□□ -0.56
APTX-230ENST00000494649 DHCR24Q15392 516 aa11.58□□□□□ -0.56
APTX-230ENST00000494649 TSR1Q2NL82 804 aaKnown RBP11.58□□□□□ -0.56
APTX-230ENST00000494649 OTUD1Q5VV17 481 aaPredicted RBP11.58□□□□□ -0.56
APTX-230ENST00000494649 MSANTD2Q6P1R3 559 aa11.58□□□□□ -0.56
APTX-230ENST00000494649 DNAJC24Q6P3W2 148 aa11.58□□□□□ -0.56
APTX-230ENST00000494649 RFWD3Q6PCD5 774 aa11.58□□□□□ -0.56
APTX-230ENST00000494649 RHBDF2Q6PJF5 856 aa11.58□□□□□ -0.56
APTX-230ENST00000494649 HTR3DQ70Z44 454 aa11.58□□□□□ -0.56
APTX-230ENST00000494649 C12orf40Q86WS4 652 aa11.58□□□□□ -0.56
APTX-230ENST00000494649 ZDHHC17Q8IUH5 632 aa11.58□□□□□ -0.56
APTX-230ENST00000494649 SERPINB11Q96P15 392 aa11.58□□□□□ -0.56
APTX-230ENST00000494649 FBRSL1Q9HCM7 1045 aaKnown RBP11.58□□□□□ -0.56
APTX-230ENST00000494649 ZNHIT6Q9NWK9 470 aaKnown RBP11.58□□□□□ -0.56
APTX-230ENST00000494649 TMEM59LQ9UK28 342 aa11.58□□□□□ -0.56
APTX-230ENST00000494649 F5P12259 2224 aa11.58□□□□□ -0.56
APTX-230ENST00000494649 IRAK2O43187 625 aa11.58□□□□□ -0.56
APTX-230ENST00000494649 CALB1P05937 261 aa11.58□□□□□ -0.56
APTX-230ENST00000494649 KRT3P12035 628 aa11.58□□□□□ -0.56
APTX-230ENST00000494649 RFC1P35251 1148 aaPredicted RBP11.58□□□□□ -0.56
APTX-230ENST00000494649 MATKP42679 507 aa11.58□□□□□ -0.56
APTX-230ENST00000494649 TRIP4Q15650 581 aaPredicted RBP11.58□□□□□ -0.56
APTX-230ENST00000494649 CCDC122Q5T0U0 273 aa11.58□□□□□ -0.56
APTX-230ENST00000494649 Q6ZNB5 142 aa11.58□□□□□ -0.56
APTX-230ENST00000494649 CNGA4Q8IV77 575 aa11.58□□□□□ -0.56
APTX-230ENST00000494649 SFTPA1Q8IWL2 248 aa11.58□□□□□ -0.56
APTX-230ENST00000494649 CPA6Q8N4T0 437 aa11.58□□□□□ -0.56
APTX-230ENST00000494649 ZNF276Q8N554 614 aa11.58□□□□□ -0.56
APTX-230ENST00000494649 RXFP2Q8WXD0 754 aa11.58□□□□□ -0.56
APTX-230ENST00000494649 FAM3CQ92520 227 aa11.58□□□□□ -0.56
APTX-230ENST00000494649 DNASE1L2Q92874 299 aa11.58□□□□□ -0.56
APTX-230ENST00000494649 ZNF653Q96CK0 615 aa11.58□□□□□ -0.56
APTX-230ENST00000494649 FCRL2Q96LA5 508 aaPredicted RBP11.58□□□□□ -0.56
APTX-230ENST00000494649 PACSIN1Q9BY11 444 aa11.58□□□□□ -0.56
APTX-230ENST00000494649 TRIM7Q9C029 511 aa11.58□□□□□ -0.56
APTX-230ENST00000494649 RBM12Q9NTZ6 932 aaKnown RBP11.58□□□□□ -0.56
APTX-230ENST00000494649 PIGVQ9NUD9 493 aa11.58□□□□□ -0.56
APTX-230ENST00000494649 RAPGEFL1Q9UHV5 662 aa11.58□□□□□ -0.56
APTX-230ENST00000494649 BZW2Q9Y6E2 419 aaKnown RBP11.58□□□□□ -0.56
APTX-230ENST00000494649 NFATC1O95644 943 aa11.57□□□□□ -0.56
APTX-230ENST00000494649 GLI1P08151 1106 aa11.57□□□□□ -0.56
APTX-230ENST00000494649 TCF3P15923 654 aa11.57□□□□□ -0.56
APTX-230ENST00000494649 PDGFRAP16234 1089 aa11.57□□□□□ -0.56
APTX-230ENST00000494649 NOS2P35228 1153 aa11.57□□□□□ -0.56
APTX-230ENST00000494649 SLC6A11P48066 632 aa11.57□□□□□ -0.56
APTX-230ENST00000494649 SGSHP51688 502 aa11.57□□□□□ -0.56
APTX-230ENST00000494649 C1QBPQ07021 282 aaKnown RBP11.57□□□□□ -0.56
APTX-230ENST00000494649 CWF19L1Q69YN2 538 aaKnown RBP11.57□□□□□ -0.56
APTX-230ENST00000494649 SMYD5Q6GMV2 418 aa11.57□□□□□ -0.56
APTX-230ENST00000494649 VPS36Q86VN1 386 aa11.57□□□□□ -0.56
APTX-230ENST00000494649 PLD4Q96BZ4 506 aa11.57□□□□□ -0.56
APTX-230ENST00000494649 MYEOVQ96EZ4 313 aa11.57□□□□□ -0.56
APTX-230ENST00000494649 BBS2Q9BXC9 721 aa11.57□□□□□ -0.56
APTX-230ENST00000494649 THAP2Q9H0W7 228 aa11.57□□□□□ -0.56
APTX-230ENST00000494649 NHEJ1Q9H9Q4 299 aaPredicted RBP11.57□□□□□ -0.56
APTX-230ENST00000494649 ZDHHC4Q9NPG8 344 aa11.57□□□□□ -0.56
APTX-230ENST00000494649 ANLNQ9NQW6 1124 aa11.57□□□□□ -0.56
APTX-230ENST00000494649 SPHK2Q9NRA0 654 aa11.57□□□□□ -0.56
APTX-230ENST00000494649 ASNSD1Q9NWL6 643 aa11.57□□□□□ -0.56
APTX-230ENST00000494649 TBC1D14Q9P2M4 693 aa11.57□□□□□ -0.56
APTX-230ENST00000494649 CNOT8Q9UFF9 292 aaKnown RBP11.57□□□□□ -0.56
APTX-230ENST00000494649 TLR6Q9Y2C9 796 aa11.57□□□□□ -0.56
APTX-230ENST00000494649 HBS1LQ9Y450 684 aaKnown RBP11.57□□□□□ -0.56
APTX-230ENST00000494649 SNX10Q9Y5X0 201 aa11.57□□□□□ -0.56
APTX-230ENST00000494649 COL4A2P08572 1712 aa11.57□□□□□ -0.56
APTX-230ENST00000494649 ZDBF2Q9HCK1 2354 aa11.57□□□□□ -0.56
APTX-230ENST00000494649 SLC9A3R1O14745 358 aaPredicted RBP11.56□□□□□ -0.56
APTX-230ENST00000494649 AKR1B10O60218 316 aa11.56□□□□□ -0.56
APTX-230ENST00000494649 RTN2O75298 545 aa11.56□□□□□ -0.56
APTX-230ENST00000494649 ADH5P11766 374 aa11.56□□□□□ -0.56
APTX-230ENST00000494649 TARSP26639 723 aaKnown RBP11.56□□□□□ -0.56
APTX-230ENST00000494649 SLC6A4P31645 630 aa11.56□□□□□ -0.56
APTX-230ENST00000494649 HNRNPH3P31942 346 aaKnown RBP11.56□□□□□ -0.56
APTX-230ENST00000494649 KDSRQ06136 332 aa11.56□□□□□ -0.56
APTX-230ENST00000494649 CCDC14Q49A88 953 aa11.56□□□□□ -0.56
APTX-230ENST00000494649 DAB2IPQ5VWQ8 1189 aa11.56□□□□□ -0.56
APTX-230ENST00000494649 NADSYN1Q6IA69 706 aa11.56□□□□□ -0.56
APTX-230ENST00000494649 ALKBH5Q6P6C2 394 aaKnown RBP11.56□□□□□ -0.56
APTX-230ENST00000494649 DCUN1D2Q6PH85 259 aa11.56□□□□□ -0.56
APTX-230ENST00000494649 FAM131BQ86XD5 332 aa11.56□□□□□ -0.56
APTX-230ENST00000494649 C3orf20Q8ND61 904 aa11.56□□□□□ -0.56
APTX-230ENST00000494649 TRIM62Q9BVG3 475 aa11.56□□□□□ -0.56
APTX-230ENST00000494649 STAP1Q9ULZ2 295 aa11.56□□□□□ -0.56
APTX-230ENST00000494649 FAM170BA6NMN3 283 aa11.56□□□□□ -0.56
APTX-230ENST00000494649 IGLV3-25P01717 112 aa11.56□□□□□ -0.56
APTX-230ENST00000494649 IGLV3-27P01718 113 aa11.56□□□□□ -0.56
APTX-230ENST00000494649 COL9A1P20849 921 aa11.56□□□□□ -0.56
APTX-230ENST00000494649 OGDHQ02218 1023 aa11.56□□□□□ -0.56
APTX-230ENST00000494649 DEUP1Q05D60 604 aa11.56□□□□□ -0.56
APTX-230ENST00000494649 MAMLD1Q13495 774 aa11.56□□□□□ -0.56
APTX-230ENST00000494649 GAB4Q2WGN9 574 aa11.56□□□□□ -0.56
APTX-230ENST00000494649 TMEM31Q5JXX7 168 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms