RNA–Protein interactions for RNA: ENST00000494646.1

MSH5-218, Transcript of mutS homolog 5, humanhuman

TSL 4

Gene MSH5, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-218ENST00000494646 CNGA2Q16280 664 aa10.04□□□□□ -0.8
MSH5-218ENST00000494646 GEN1Q17RS7 908 aa10.04□□□□□ -0.8
MSH5-218ENST00000494646 MAP7D1Q3KQU3 841 aa10.04□□□□□ -0.8
MSH5-218ENST00000494646 PPM1JQ5JR12 505 aa10.04□□□□□ -0.8
MSH5-218ENST00000494646 STPG1Q5TH74 334 aa10.04□□□□□ -0.8
MSH5-218ENST00000494646 FYB2Q5VWT5 728 aa10.04□□□□□ -0.8
MSH5-218ENST00000494646 IL31Q6EBC2 164 aa10.04□□□□□ -0.8
MSH5-218ENST00000494646 SMYD5Q6GMV2 418 aa10.04□□□□□ -0.8
MSH5-218ENST00000494646 KIAA1211LQ6NV74 962 aa10.04□□□□□ -0.8
MSH5-218ENST00000494646 LCLAT1Q6UWP7 414 aa10.04□□□□□ -0.8
MSH5-218ENST00000494646 TRMT11Q7Z4G4 463 aaKnown RBP10.04□□□□□ -0.8
MSH5-218ENST00000494646 TRIM59Q8IWR1 403 aa10.04□□□□□ -0.8
MSH5-218ENST00000494646 SIX6OS1Q8N1H7 587 aa10.04□□□□□ -0.8
MSH5-218ENST00000494646 RBBP8NLQ8NC74 664 aaPredicted RBP10.04□□□□□ -0.8
MSH5-218ENST00000494646 CLEC4CQ8WTT0 213 aa10.04□□□□□ -0.8
MSH5-218ENST00000494646 DDI1Q8WTU0 396 aa10.04□□□□□ -0.8
MSH5-218ENST00000494646 SLC35F5Q8WV83 523 aa10.04□□□□□ -0.8
MSH5-218ENST00000494646 KREMEN1Q96MU8 473 aa10.04□□□□□ -0.8
MSH5-218ENST00000494646 MIS12Q9H081 205 aa10.04□□□□□ -0.8
MSH5-218ENST00000494646 SLC6A17Q9H1V8 727 aa10.04□□□□□ -0.8
MSH5-218ENST00000494646 UBE2TQ9NPD8 197 aaPredicted RBP10.04□□□□□ -0.8
MSH5-218ENST00000494646 ABCC13Q9NSE7 274 aa10.04□□□□□ -0.8
MSH5-218ENST00000494646 CACNA2D2Q9NY47 1150 aa10.04□□□□□ -0.8
MSH5-218ENST00000494646 KIAA1468Q9P260 1216 aa10.04□□□□□ -0.8
MSH5-218ENST00000494646 FBXO10Q9UK96 956 aa10.04□□□□□ -0.8
MSH5-218ENST00000494646 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.04□□□□□ -0.8
MSH5-218ENST00000494646 TNRC6BQ9UPQ9 1833 aaKnown RBP10.04□□□□□ -0.8
MSH5-218ENST00000494646 NCOR2Q9Y618 2525 aa10.04□□□□□ -0.8
MSH5-218ENST00000494646 PLXND1Q9Y4D7 1925 aa10.03□□□□□ -0.8
MSH5-218ENST00000494646 M0QYV0 167 aa10.03□□□□□ -0.8
MSH5-218ENST00000494646 PMM2O15305 246 aa10.03□□□□□ -0.8
MSH5-218ENST00000494646 P4HA2O15460 535 aa10.03□□□□□ -0.8
MSH5-218ENST00000494646 ZBTB24O43167 697 aaPredicted RBP10.03□□□□□ -0.8
MSH5-218ENST00000494646 GNA14O95837 355 aa10.03□□□□□ -0.8
MSH5-218ENST00000494646 PAEPP09466 180 aa10.03□□□□□ -0.8
MSH5-218ENST00000494646 KRT5P13647 590 aa10.03□□□□□ -0.8
MSH5-218ENST00000494646 PTGER3P43115 390 aa10.03□□□□□ -0.8
MSH5-218ENST00000494646 DAOAP59103 153 aa10.03□□□□□ -0.8
MSH5-218ENST00000494646 TRIP4Q15650 581 aaPredicted RBP10.03□□□□□ -0.8
MSH5-218ENST00000494646 PKDCCQ504Y2 493 aa10.03□□□□□ -0.8
MSH5-218ENST00000494646 RNF43Q68DV7 783 aa10.03□□□□□ -0.8
MSH5-218ENST00000494646 GJB7Q6PEY0 223 aa10.03□□□□□ -0.8
MSH5-218ENST00000494646 LPCAT2Q7L5N7 544 aa10.03□□□□□ -0.8
MSH5-218ENST00000494646 C11orf74Q86VG3 221 aa10.03□□□□□ -0.8
MSH5-218ENST00000494646 SCUBE3Q8IX30 993 aa10.03□□□□□ -0.8
MSH5-218ENST00000494646 IPO4Q8TEX9 1081 aaKnown RBP10.03□□□□□ -0.8
MSH5-218ENST00000494646 KCTD13Q8WZ19 329 aa10.03□□□□□ -0.8
MSH5-218ENST00000494646 PLD4Q96BZ4 506 aa10.03□□□□□ -0.8
MSH5-218ENST00000494646 CRACR2AQ9BSW2 395 aa10.03□□□□□ -0.8
MSH5-218ENST00000494646 INTS2Q9H0H0 1204 aaKnown RBP10.03□□□□□ -0.8
MSH5-218ENST00000494646 TMEM74BQ9NUR3 256 aa10.03□□□□□ -0.8
MSH5-218ENST00000494646 CYP8B1Q9UNU6 501 aa10.03□□□□□ -0.8
MSH5-218ENST00000494646 GOLGA6L7A0A1B0GV03 622 aa10.02□□□□□ -0.81
MSH5-218ENST00000494646 C4orf47A7E2U8 309 aa10.02□□□□□ -0.81
MSH5-218ENST00000494646 KHNYNO15037 678 aaKnown RBP10.02□□□□□ -0.81
MSH5-218ENST00000494646 MSI1O43347 362 aaKnown RBP10.02□□□□□ -0.81
MSH5-218ENST00000494646 PENKP01210 267 aaPredicted RBP10.02□□□□□ -0.81
MSH5-218ENST00000494646 CYBBP04839 570 aa10.02□□□□□ -0.81
MSH5-218ENST00000494646 SETSIPP0DME0 302 aa10.02□□□□□ -0.81
MSH5-218ENST00000494646 SLC9A1P19634 815 aa10.02□□□□□ -0.81
MSH5-218ENST00000494646 USP8P40818 1118 aa10.02□□□□□ -0.81
MSH5-218ENST00000494646 IL12RB1P42701 662 aa10.02□□□□□ -0.81
MSH5-218ENST00000494646 HARS2P49590 506 aaKnown RBP10.02□□□□□ -0.81
MSH5-218ENST00000494646 MFAP3P55082 362 aa10.02□□□□□ -0.81
MSH5-218ENST00000494646 UBE2HP62256 183 aa10.02□□□□□ -0.81
MSH5-218ENST00000494646 IRX4P78413 519 aa10.02□□□□□ -0.81
MSH5-218ENST00000494646 BYSLQ13895 437 aaKnown RBP10.02□□□□□ -0.81
MSH5-218ENST00000494646 ARHGAP44Q17R89 818 aa10.02□□□□□ -0.81
MSH5-218ENST00000494646 CYP2U1Q7Z449 544 aa10.02□□□□□ -0.81
MSH5-218ENST00000494646 SORCS1Q8WY21 1168 aa10.02□□□□□ -0.81
MSH5-218ENST00000494646 PIWIL1Q96J94 861 aaKnown RBP10.02□□□□□ -0.81
MSH5-218ENST00000494646 SPACA7Q96KW9 195 aa10.02□□□□□ -0.81
MSH5-218ENST00000494646 MED15Q96RN5 788 aa10.02□□□□□ -0.81
MSH5-218ENST00000494646 GABRG3Q99928 467 aa10.02□□□□□ -0.81
MSH5-218ENST00000494646 ACP6Q9NPH0 428 aa10.02□□□□□ -0.81
MSH5-218ENST00000494646 CD93Q9NPY3 652 aa10.02□□□□□ -0.81
MSH5-218ENST00000494646 CNGB3Q9NQW8 809 aa10.02□□□□□ -0.81
MSH5-218ENST00000494646 ST7Q9NRC1 585 aa10.02□□□□□ -0.81
MSH5-218ENST00000494646 OLA1Q9NTK5 396 aaKnown RBP10.02□□□□□ -0.81
MSH5-218ENST00000494646 CHMP5Q9NZZ3 219 aa10.02□□□□□ -0.81
MSH5-218ENST00000494646 CALCOCO1Q9P1Z2 691 aa10.02□□□□□ -0.81
MSH5-218ENST00000494646 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.02□□□□□ -0.81
MSH5-218ENST00000494646 HBS1LQ9Y450 684 aaKnown RBP10.02□□□□□ -0.81
MSH5-218ENST00000494646 STON1Q9Y6Q2 735 aa10.02□□□□□ -0.81
MSH5-218ENST00000494646 ASCC3Q8N3C0 2202 aaKnown RBP10.02□□□□□ -0.81
MSH5-218ENST00000494646 TM4SF5O14894 197 aa10.01□□□□□ -0.81
MSH5-218ENST00000494646 LETM1O95202 739 aaPredicted RBP10.01□□□□□ -0.81
MSH5-218ENST00000494646 FGFR1OPO95684 399 aaKnown RBP10.01□□□□□ -0.81
MSH5-218ENST00000494646 PYGBP11216 843 aa10.01□□□□□ -0.81
MSH5-218ENST00000494646 NDUFV2P19404 249 aa10.01□□□□□ -0.81
MSH5-218ENST00000494646 ITPKAP23677 461 aa10.01□□□□□ -0.81
MSH5-218ENST00000494646 ZNF132P52740 706 aa10.01□□□□□ -0.81
MSH5-218ENST00000494646 LIMK1P53667 647 aa10.01□□□□□ -0.81
MSH5-218ENST00000494646 MARSP56192 900 aaKnown RBP10.01□□□□□ -0.81
MSH5-218ENST00000494646 APBA1Q02410 837 aa10.01□□□□□ -0.81
MSH5-218ENST00000494646 GCNT1Q02742 428 aa10.01□□□□□ -0.81
MSH5-218ENST00000494646 RPL6Q02878 288 aaKnown RBP10.01□□□□□ -0.81
MSH5-218ENST00000494646 STILQ15468 1287 aa10.01□□□□□ -0.81
MSH5-218ENST00000494646 UAP1L1Q3KQV9 507 aa10.01□□□□□ -0.81
MSH5-218ENST00000494646 MPPE1Q53F39 396 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms