RNA–Protein interactions for RNA: ENST00000494612.1

SMC4-224, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-224ENST00000494612 KRT38O76015 456 aa5.1□□□□□ -1.59
SMC4-224ENST00000494612 ACTL6BO94805 426 aa5.1□□□□□ -1.59
SMC4-224ENST00000494612 PCSK6P29122 969 aa5.1□□□□□ -1.59
SMC4-224ENST00000494612 SLC5A2P31639 672 aa5.1□□□□□ -1.59
SMC4-224ENST00000494612 COL15A1P39059 1388 aa5.1□□□□□ -1.59
SMC4-224ENST00000494612 PNLIPRP1P54315 467 aa5.1□□□□□ -1.59
SMC4-224ENST00000494612 PSG6Q00889 435 aa5.1□□□□□ -1.59
SMC4-224ENST00000494612 PLAC9Q5JTB6 97 aa5.1□□□□□ -1.59
SMC4-224ENST00000494612 AMIGO2Q86SJ2 522 aa5.1□□□□□ -1.59
SMC4-224ENST00000494612 RAB11FIP4Q86YS3 637 aa5.1□□□□□ -1.59
SMC4-224ENST00000494612 SIRT6Q8N6T7 355 aa5.1□□□□□ -1.59
SMC4-224ENST00000494612 STT3BQ8TCJ2 826 aa5.1□□□□□ -1.59
SMC4-224ENST00000494612 CTHRC1Q96CG8 243 aa5.1□□□□□ -1.59
SMC4-224ENST00000494612 VPS50Q96JG6 964 aa5.1□□□□□ -1.59
SMC4-224ENST00000494612 MACROD1Q9BQ69 325 aa5.1□□□□□ -1.59
SMC4-224ENST00000494612 LDHAL6BQ9BYZ2 381 aaPredicted RBP5.1□□□□□ -1.59
SMC4-224ENST00000494612 TAF1DQ9H5J8 278 aaPredicted RBP5.1□□□□□ -1.59
SMC4-224ENST00000494612 USP29Q9HBJ7 922 aa5.1□□□□□ -1.59
SMC4-224ENST00000494612 DUSP22Q9NRW4 184 aa5.1□□□□□ -1.59
SMC4-224ENST00000494612 WNT6Q9Y6F9 365 aa5.1□□□□□ -1.59
SMC4-224ENST00000494612 DGKBQ9Y6T7 804 aa5.1□□□□□ -1.59
SMC4-224ENST00000494612 OR2W5A6NFC9 320 aa5.09□□□□□ -1.59
SMC4-224ENST00000494612 H0YIZ8 118 aa5.09□□□□□ -1.59
SMC4-224ENST00000494612 M0QYT0 321 aa5.09□□□□□ -1.59
SMC4-224ENST00000494612 EXOC3O60645 756 aa5.09□□□□□ -1.59
SMC4-224ENST00000494612 RPP40O75818 363 aaKnown RBP5.09□□□□□ -1.59
SMC4-224ENST00000494612 GLP2RO95838 553 aa5.09□□□□□ -1.59
SMC4-224ENST00000494612 DHRS4L1P0CG22 281 aa5.09□□□□□ -1.59
SMC4-224ENST00000494612 CCT8P50990 548 aa5.09□□□□□ -1.59
SMC4-224ENST00000494612 EEFSECP57772 596 aaKnown RBP5.09□□□□□ -1.59
SMC4-224ENST00000494612 SUMO2P61956 95 aaKnown RBP5.09□□□□□ -1.59
SMC4-224ENST00000494612 RAPGEF1Q13905 1077 aa5.09□□□□□ -1.59
SMC4-224ENST00000494612 CSHL1Q14406 222 aa5.09□□□□□ -1.59
SMC4-224ENST00000494612 ACOX1Q15067 660 aa5.09□□□□□ -1.59
SMC4-224ENST00000494612 RPS6KA2Q15349 733 aa5.09□□□□□ -1.59
SMC4-224ENST00000494612 ATPAF1Q5TC12 328 aaPredicted RBP5.09□□□□□ -1.59
SMC4-224ENST00000494612 MSANTD2Q6P1R3 559 aa5.09□□□□□ -1.59
SMC4-224ENST00000494612 PIK3AP1Q6ZUJ8 805 aa5.09□□□□□ -1.59
SMC4-224ENST00000494612 KRT27Q7Z3Y8 459 aa5.09□□□□□ -1.59
SMC4-224ENST00000494612 NRSN1Q8IZ57 195 aa5.09□□□□□ -1.59
SMC4-224ENST00000494612 GALNT15Q8N3T1 639 aa5.09□□□□□ -1.59
SMC4-224ENST00000494612 ABHD11Q8NFV4 315 aa5.09□□□□□ -1.59
SMC4-224ENST00000494612 SEMA6DQ8NFY4 1073 aa5.09□□□□□ -1.59
SMC4-224ENST00000494612 SLC22A17Q8WUG5 538 aa5.09□□□□□ -1.59
SMC4-224ENST00000494612 C3orf49Q96BT1 292 aa5.09□□□□□ -1.59
SMC4-224ENST00000494612 TRAPPC9Q96Q05 1148 aa5.09□□□□□ -1.59
SMC4-224ENST00000494612 WDR24Q96S15 920 aa5.09□□□□□ -1.59
SMC4-224ENST00000494612 RTKNQ9BST9 563 aa5.09□□□□□ -1.59
SMC4-224ENST00000494612 MECRQ9BV79 373 aa5.09□□□□□ -1.59
SMC4-224ENST00000494612 TMEM120AQ9BXJ8 343 aa5.09□□□□□ -1.59
SMC4-224ENST00000494612 ZCWPW1Q9H0M4 648 aa5.09□□□□□ -1.59
SMC4-224ENST00000494612 PABPC3Q9H361 631 aaKnown RBP5.09□□□□□ -1.59
SMC4-224ENST00000494612 SAP30LQ9HAJ7 183 aa5.09□□□□□ -1.59
SMC4-224ENST00000494612 SERTAD4Q9NUC0 356 aa5.09□□□□□ -1.59
SMC4-224ENST00000494612 SRP68Q9UHB9 627 aaKnown RBP5.09□□□□□ -1.59
SMC4-224ENST00000494612 AMFRQ9UKV5 643 aa5.09□□□□□ -1.59
SMC4-224ENST00000494612 CA14Q9ULX7 337 aa5.09□□□□□ -1.59
SMC4-224ENST00000494612 GPR52Q9Y2T5 361 aa5.09□□□□□ -1.59
SMC4-224ENST00000494612 CBFA2T3O75081 653 aa5.08□□□□□ -1.6
SMC4-224ENST00000494612 PRKCBP05771 671 aa5.08□□□□□ -1.6
SMC4-224ENST00000494612 COPB1P53618 953 aaKnown RBP5.08□□□□□ -1.6
SMC4-224ENST00000494612 PRKAA2P54646 552 aa5.08□□□□□ -1.6
SMC4-224ENST00000494612 AP2B1P63010 937 aa5.08□□□□□ -1.6
SMC4-224ENST00000494612 RNASELQ05823 741 aaKnown RBP5.08□□□□□ -1.6
SMC4-224ENST00000494612 SEMA3BQ13214 749 aa5.08□□□□□ -1.6
SMC4-224ENST00000494612 CUL4BQ13620 913 aa5.08□□□□□ -1.6
SMC4-224ENST00000494612 SRSF7Q16629 238 aaKnown RBP eCLIP5.08□□□□□ -1.6
SMC4-224ENST00000494612 AASDHQ4L235 1098 aaPredicted RBP5.08□□□□□ -1.6
SMC4-224ENST00000494612 ANKRD40Q6AI12 368 aa5.08□□□□□ -1.6
SMC4-224ENST00000494612 CCDC144NLQ6NUI1 221 aa5.08□□□□□ -1.6
SMC4-224ENST00000494612 C11orf87Q6NUJ2 197 aa5.08□□□□□ -1.6
SMC4-224ENST00000494612 KIRREL2Q6UWL6 708 aa5.08□□□□□ -1.6
SMC4-224ENST00000494612 PTCHD4Q6ZW05 846 aa5.08□□□□□ -1.6
SMC4-224ENST00000494612 MOGAT3Q86VF5 341 aa5.08□□□□□ -1.6
SMC4-224ENST00000494612 SLC44A2Q8IWA5 706 aaPredicted RBP5.08□□□□□ -1.6
SMC4-224ENST00000494612 SMAP1Q8IYB5 467 aaPredicted RBP5.08□□□□□ -1.6
SMC4-224ENST00000494612 OTUD7AQ8TE49 926 aaPredicted RBP5.08□□□□□ -1.6
SMC4-224ENST00000494612 AFG1LQ8WV93 481 aa5.08□□□□□ -1.6
SMC4-224ENST00000494612 PPM1EQ8WY54 764 aa5.08□□□□□ -1.6
SMC4-224ENST00000494612 EID2BQ96D98 161 aa5.08□□□□□ -1.6
SMC4-224ENST00000494612 VPS16Q9H269 839 aa5.08□□□□□ -1.6
SMC4-224ENST00000494612 TP63Q9H3D4 680 aaPredicted RBP5.08□□□□□ -1.6
SMC4-224ENST00000494612 ELAC1Q9H777 363 aaKnown RBP5.08□□□□□ -1.6
SMC4-224ENST00000494612 DAPP1Q9UN19 280 aa5.08□□□□□ -1.6
SMC4-224ENST00000494612 ADAMTS5Q9UNA0 930 aa5.08□□□□□ -1.6
SMC4-224ENST00000494612 ZNF804BA4D1E1 1349 aa5.07□□□□□ -1.6
SMC4-224ENST00000494612 LOC105378220A0A1B0GUY1 285 aaPredicted RBP5.07□□□□□ -1.6
SMC4-224ENST00000494612 B9A039 149 aa5.07□□□□□ -1.6
SMC4-224ENST00000494612 M0QZQ0 153 aa5.07□□□□□ -1.6
SMC4-224ENST00000494612 M0R3H8 397 aa5.07□□□□□ -1.6
SMC4-224ENST00000494612 DHHO43323 396 aa5.07□□□□□ -1.6
SMC4-224ENST00000494612 KCNAB3O43448 404 aa5.07□□□□□ -1.6
SMC4-224ENST00000494612 FGAP02671 866 aa5.07□□□□□ -1.6
SMC4-224ENST00000494612 DLDP09622 509 aaKnown RBP5.07□□□□□ -1.6
SMC4-224ENST00000494612 NPSP0C0P6 89 aa5.07□□□□□ -1.6
SMC4-224ENST00000494612 CBSLP0DN79 551 aa5.07□□□□□ -1.6
SMC4-224ENST00000494612 CBSP35520 551 aa5.07□□□□□ -1.6
SMC4-224ENST00000494612 MAPK9P45984 424 aa5.07□□□□□ -1.6
SMC4-224ENST00000494612 DIO1P49895 249 aa5.07□□□□□ -1.6
SMC4-224ENST00000494612 CYP4F2P78329 520 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms