RNA–Protein interactions for RNA: ENST00000493949.1

PDLIM1-205, Transcript of PDZ and LIM domain 1, humanhuman

TSL 3

Gene PDLIM1, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-205ENST00000493949 LNX1Q8TBB1 728 aaPredicted RBP11.09□□□□□ -0.63
PDLIM1-205ENST00000493949 SLC7A14Q8TBB6 771 aa11.09□□□□□ -0.63
PDLIM1-205ENST00000493949 ING5Q8WYH8 240 aa11.09□□□□□ -0.63
PDLIM1-205ENST00000493949 NLRP4Q96MN2 994 aa11.09□□□□□ -0.63
PDLIM1-205ENST00000493949 SELENOSQ9BQE4 189 aa11.09□□□□□ -0.63
PDLIM1-205ENST00000493949 EDEM2Q9BV94 578 aa11.09□□□□□ -0.63
PDLIM1-205ENST00000493949 DPH5Q9H2P9 285 aa11.09□□□□□ -0.63
PDLIM1-205ENST00000493949 LRRC19Q9H756 370 aa11.09□□□□□ -0.63
PDLIM1-205ENST00000493949 MINDY3Q9H8M7 445 aa11.09□□□□□ -0.63
PDLIM1-205ENST00000493949 ZFP14Q9HCL3 533 aa11.09□□□□□ -0.63
PDLIM1-205ENST00000493949 DMAC2Q9NW81 257 aa11.09□□□□□ -0.63
PDLIM1-205ENST00000493949 CACNA2D2Q9NY47 1150 aa11.09□□□□□ -0.63
PDLIM1-205ENST00000493949 SENP1Q9P0U3 644 aa11.09□□□□□ -0.63
PDLIM1-205ENST00000493949 SEPT9Q9UHD8 586 aaPredicted RBP11.09□□□□□ -0.63
PDLIM1-205ENST00000493949 POLIQ9UNA4 740 aa11.09□□□□□ -0.63
PDLIM1-205ENST00000493949 PI4KAP42356 2102 aa11.08□□□□□ -0.64
PDLIM1-205ENST00000493949 ZMYM2Q9UBW7 1377 aa11.08□□□□□ -0.64
PDLIM1-205ENST00000493949 FAM221BA6H8Z2 402 aa11.08□□□□□ -0.64
PDLIM1-205ENST00000493949 C4orf47A7E2U8 309 aa11.08□□□□□ -0.64
PDLIM1-205ENST00000493949 ARNTLO00327 626 aa11.08□□□□□ -0.64
PDLIM1-205ENST00000493949 MSH4O15457 936 aa11.08□□□□□ -0.64
PDLIM1-205ENST00000493949 RTN2O75298 545 aa11.08□□□□□ -0.64
PDLIM1-205ENST00000493949 RPP40O75818 363 aaKnown RBP11.08□□□□□ -0.64
PDLIM1-205ENST00000493949 MICAL2O94851 1124 aa11.08□□□□□ -0.64
PDLIM1-205ENST00000493949 ABHD2P08910 425 aa11.08□□□□□ -0.64
PDLIM1-205ENST00000493949 PSMC3P17980 439 aa11.08□□□□□ -0.64
PDLIM1-205ENST00000493949 FLT3P36888 993 aa11.08□□□□□ -0.64
PDLIM1-205ENST00000493949 RASSF2P50749 326 aa11.08□□□□□ -0.64
PDLIM1-205ENST00000493949 SCNN1GP51170 649 aa11.08□□□□□ -0.64
PDLIM1-205ENST00000493949 COPS2P61201 443 aa11.08□□□□□ -0.64
PDLIM1-205ENST00000493949 MYL7Q01449 175 aa11.08□□□□□ -0.64
PDLIM1-205ENST00000493949 STRN3Q13033 797 aa11.08□□□□□ -0.64
PDLIM1-205ENST00000493949 GRM2Q14416 872 aa11.08□□□□□ -0.64
PDLIM1-205ENST00000493949 DRAP1Q14919 205 aaPredicted RBP11.08□□□□□ -0.64
PDLIM1-205ENST00000493949 RASA2Q15283 850 aa11.08□□□□□ -0.64
PDLIM1-205ENST00000493949 WDR44Q5JSH3 913 aa11.08□□□□□ -0.64
PDLIM1-205ENST00000493949 TCERG1LQ5VWI1 586 aa11.08□□□□□ -0.64
PDLIM1-205ENST00000493949 PLA2G4FQ68DD2 849 aa11.08□□□□□ -0.64
PDLIM1-205ENST00000493949 RGS9BPQ6ZS82 235 aa11.08□□□□□ -0.64
PDLIM1-205ENST00000493949 INTS8Q75QN2 995 aaKnown RBP11.08□□□□□ -0.64
PDLIM1-205ENST00000493949 KBTBD6Q86V97 674 aa11.08□□□□□ -0.64
PDLIM1-205ENST00000493949 LRRC34Q8IZ02 419 aa11.08□□□□□ -0.64
PDLIM1-205ENST00000493949 GSTCDQ8NEC7 633 aa11.08□□□□□ -0.64
PDLIM1-205ENST00000493949 OLIG1Q8TAK6 271 aa11.08□□□□□ -0.64
PDLIM1-205ENST00000493949 DEPDC1BQ8WUY9 529 aa11.08□□□□□ -0.64
PDLIM1-205ENST00000493949 INPP5DQ92835 1189 aa11.08□□□□□ -0.64
PDLIM1-205ENST00000493949 TMEM237Q96Q45 408 aa11.08□□□□□ -0.64
PDLIM1-205ENST00000493949 GAD1Q99259 594 aa11.08□□□□□ -0.64
PDLIM1-205ENST00000493949 AGPAT1Q99943 283 aa11.08□□□□□ -0.64
PDLIM1-205ENST00000493949 CCDC77Q9BR77 488 aa11.08□□□□□ -0.64
PDLIM1-205ENST00000493949 TIPINQ9BVW5 301 aa11.08□□□□□ -0.64
PDLIM1-205ENST00000493949 PHACTR1Q9C0D0 580 aa11.08□□□□□ -0.64
PDLIM1-205ENST00000493949 SMOC1Q9H4F8 434 aa11.08□□□□□ -0.64
PDLIM1-205ENST00000493949 C2orf42Q9NWW7 574 aa11.08□□□□□ -0.64
PDLIM1-205ENST00000493949 TCEAL9Q9UHQ7 104 aa11.08□□□□□ -0.64
PDLIM1-205ENST00000493949 DNAJC12Q9UKB3 198 aa11.08□□□□□ -0.64
PDLIM1-205ENST00000493949 PCDHA3Q9Y5H8 950 aa11.08□□□□□ -0.64
PDLIM1-205ENST00000493949 APC2O95996 2303 aa11.08□□□□□ -0.64
PDLIM1-205ENST00000493949 ABCA7Q8IZY2 2146 aa11.08□□□□□ -0.64
PDLIM1-205ENST00000493949 SF3B1O75533 1304 aaKnown RBP eCLIP11.08□□□□□ -0.64
PDLIM1-205ENST00000493949 MAFO75444 373 aaPredicted RBP11.07□□□□□ -0.64
PDLIM1-205ENST00000493949 MED24O75448 989 aa11.07□□□□□ -0.64
PDLIM1-205ENST00000493949 FAM13AO94988 1023 aa11.07□□□□□ -0.64
PDLIM1-205ENST00000493949 ECEL1O95672 775 aa11.07□□□□□ -0.64
PDLIM1-205ENST00000493949 GAS8O95995 478 aa11.07□□□□□ -0.64
PDLIM1-205ENST00000493949 RHOP08100 348 aa11.07□□□□□ -0.64
PDLIM1-205ENST00000493949 VIMP08670 466 aaKnown RBP11.07□□□□□ -0.64
PDLIM1-205ENST00000493949 KRT13P13646 458 aa11.07□□□□□ -0.64
PDLIM1-205ENST00000493949 CEBPBP17676 345 aa11.07□□□□□ -0.64
PDLIM1-205ENST00000493949 COILP38432 576 aaPredicted RBP11.07□□□□□ -0.64
PDLIM1-205ENST00000493949 MLH1P40692 756 aa11.07□□□□□ -0.64
PDLIM1-205ENST00000493949 RNASE9P60153 205 aaKnown RBP11.07□□□□□ -0.64
PDLIM1-205ENST00000493949 NCALDP61601 193 aa11.07□□□□□ -0.64
PDLIM1-205ENST00000493949 PTP4A2Q12974 167 aa11.07□□□□□ -0.64
PDLIM1-205ENST00000493949 AUHQ13825 339 aaKnown RBP11.07□□□□□ -0.64
PDLIM1-205ENST00000493949 RAB33AQ14088 237 aa11.07□□□□□ -0.64
PDLIM1-205ENST00000493949 SLC29A2Q14542 456 aa11.07□□□□□ -0.64
PDLIM1-205ENST00000493949 PSMD5Q16401 504 aa11.07□□□□□ -0.64
PDLIM1-205ENST00000493949 FAM78AQ5JUQ0 283 aa11.07□□□□□ -0.64
PDLIM1-205ENST00000493949 PRSS36Q5K4E3 855 aa11.07□□□□□ -0.64
PDLIM1-205ENST00000493949 DCAF12L1Q5VU92 463 aa11.07□□□□□ -0.64
PDLIM1-205ENST00000493949 TCEAL6Q6IPX3 200 aa11.07□□□□□ -0.64
PDLIM1-205ENST00000493949 CCDC137Q6PK04 289 aaKnown RBP11.07□□□□□ -0.64
PDLIM1-205ENST00000493949 CATSPER3Q86XQ3 398 aa11.07□□□□□ -0.64
PDLIM1-205ENST00000493949 AGGF1Q8N302 714 aaeCLIP11.07□□□□□ -0.64
PDLIM1-205ENST00000493949 SYNPOQ8N3V7 929 aa11.07□□□□□ -0.64
PDLIM1-205ENST00000493949 FBXO25Q8TCJ0 367 aa11.07□□□□□ -0.64
PDLIM1-205ENST00000493949 ZNF398Q8TD17 642 aa11.07□□□□□ -0.64
PDLIM1-205ENST00000493949 DYDC1Q8WWB3 177 aa11.07□□□□□ -0.64
PDLIM1-205ENST00000493949 CKAP2Q8WWK9 683 aa11.07□□□□□ -0.64
PDLIM1-205ENST00000493949 TCEAL3Q969E4 200 aa11.07□□□□□ -0.64
PDLIM1-205ENST00000493949 ZBTB9Q96C00 473 aa11.07□□□□□ -0.64
PDLIM1-205ENST00000493949 TRIM11Q96F44 468 aa11.07□□□□□ -0.64
PDLIM1-205ENST00000493949 MAGEB18Q96M61 343 aa11.07□□□□□ -0.64
PDLIM1-205ENST00000493949 ZFP42Q96MM3 310 aa11.07□□□□□ -0.64
PDLIM1-205ENST00000493949 ASB16Q96NS5 453 aa11.07□□□□□ -0.64
PDLIM1-205ENST00000493949 BBC3Q96PG8 261 aaPredicted RBP11.07□□□□□ -0.64
PDLIM1-205ENST00000493949 TRIM51Q9BSJ1 452 aa11.07□□□□□ -0.64
PDLIM1-205ENST00000493949 TTPALQ9BTX7 342 aa11.07□□□□□ -0.64
PDLIM1-205ENST00000493949 INTS2Q9H0H0 1204 aaKnown RBP11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms