RNA–Protein interactions for RNA: ENST00000493919.5

BRCA1-222, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 1,948 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-222ENST00000493919 EPN3Q9H201 632 aa12.01□□□□□ -0.49
BRCA1-222ENST00000493919 PRDM12Q9H4Q4 367 aa12.01□□□□□ -0.49
BRCA1-222ENST00000493919 TBC1D13Q9NVG8 400 aa12.01□□□□□ -0.49
BRCA1-222ENST00000493919 ARMC1Q9NVT9 282 aa12.01□□□□□ -0.49
BRCA1-222ENST00000493919 MBD2Q9UBB5 411 aa12.01□□□□□ -0.49
BRCA1-222ENST00000493919 HSFX1Q9UBD0 423 aa12.01□□□□□ -0.49
BRCA1-222ENST00000493919 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.01□□□□□ -0.49
BRCA1-222ENST00000493919 ZMYM2Q9UBW7 1377 aa12.01□□□□□ -0.49
BRCA1-222ENST00000493919 PRUNE2Q8WUY3 3088 aa12.01□□□□□ -0.49
BRCA1-222ENST00000493919 TDRD15B5MCY1 1934 aaKnown RBP12.01□□□□□ -0.49
BRCA1-222ENST00000493919 A0A1W2PQ67 120 aa12.01□□□□□ -0.49
BRCA1-222ENST00000493919 ARHGAP10A1A4S6 786 aa12.01□□□□□ -0.49
BRCA1-222ENST00000493919 ANKRD34BA5PLL1 514 aa12.01□□□□□ -0.49
BRCA1-222ENST00000493919 FADS2P1A8MWK0 482 aa12.01□□□□□ -0.49
BRCA1-222ENST00000493919 NCK2O43639 380 aa12.01□□□□□ -0.49
BRCA1-222ENST00000493919 DAB1O75553 588 aa12.01□□□□□ -0.49
BRCA1-222ENST00000493919 EPN2O95208 641 aa12.01□□□□□ -0.49
BRCA1-222ENST00000493919 GRM5P41594 1212 aa12.01□□□□□ -0.49
BRCA1-222ENST00000493919 MAP3K7CLP57077 242 aa12.01□□□□□ -0.49
BRCA1-222ENST00000493919 MCL1Q07820 350 aa12.01□□□□□ -0.49
BRCA1-222ENST00000493919 STK4Q13043 487 aa12.01□□□□□ -0.49
BRCA1-222ENST00000493919 CAMK4Q16566 473 aa12.01□□□□□ -0.49
BRCA1-222ENST00000493919 KLHL38Q2WGJ6 581 aa12.01□□□□□ -0.49
BRCA1-222ENST00000493919 GLRA4Q5JXX5 417 aa12.01□□□□□ -0.49
BRCA1-222ENST00000493919 TRIM68Q6AZZ1 485 aa12.01□□□□□ -0.49
BRCA1-222ENST00000493919 TMEM214Q6NUQ4 689 aaKnown RBP12.01□□□□□ -0.49
BRCA1-222ENST00000493919 TMEM154Q6P9G4 183 aa12.01□□□□□ -0.49
BRCA1-222ENST00000493919 ZNF704Q6ZNC4 412 aaPredicted RBP12.01□□□□□ -0.49
BRCA1-222ENST00000493919 CFAP61Q8NHU2 1237 aa12.01□□□□□ -0.49
BRCA1-222ENST00000493919 ANGPTL6Q8NI99 470 aa12.01□□□□□ -0.49
BRCA1-222ENST00000493919 GDPD5Q8WTR4 605 aa12.01□□□□□ -0.49
BRCA1-222ENST00000493919 STK32AQ8WU08 396 aa12.01□□□□□ -0.49
BRCA1-222ENST00000493919 SCFD1Q8WVM8 642 aa12.01□□□□□ -0.49
BRCA1-222ENST00000493919 GBP5Q96PP8 586 aa12.01□□□□□ -0.49
BRCA1-222ENST00000493919 SECISBP2Q96T21 854 aaKnown RBP12.01□□□□□ -0.49
BRCA1-222ENST00000493919 TMEM206Q9H813 350 aa12.01□□□□□ -0.49
BRCA1-222ENST00000493919 PLCB1Q9NQ66 1216 aa12.01□□□□□ -0.49
BRCA1-222ENST00000493919 GMIPQ9P107 970 aa12.01□□□□□ -0.49
BRCA1-222ENST00000493919 LNPEPQ9UIQ6 1025 aa12.01□□□□□ -0.49
BRCA1-222ENST00000493919 XIRP2A4UGR9 3374 aa12.01□□□□□ -0.49
BRCA1-222ENST00000493919 PRRT4C9JH25 899 aa12□□□□□ -0.49
BRCA1-222ENST00000493919 XPOTO43592 962 aaKnown RBP12□□□□□ -0.49
BRCA1-222ENST00000493919 PHACTR2O75167 634 aa12□□□□□ -0.49
BRCA1-222ENST00000493919 RHOBTB3O94955 611 aa12□□□□□ -0.49
BRCA1-222ENST00000493919 ASMTLO95671 621 aa12□□□□□ -0.49
BRCA1-222ENST00000493919 ACADSP16219 412 aa12□□□□□ -0.49
BRCA1-222ENST00000493919 SSTP61278 116 aa12□□□□□ -0.49
BRCA1-222ENST00000493919 FAPQ12884 760 aa12□□□□□ -0.49
BRCA1-222ENST00000493919 CUL1Q13616 776 aa12□□□□□ -0.49
BRCA1-222ENST00000493919 CYLC2Q14093 348 aaPredicted RBP12□□□□□ -0.49
BRCA1-222ENST00000493919 ZNF268Q14587 947 aaPredicted RBP12□□□□□ -0.49
BRCA1-222ENST00000493919 GRIN2CQ14957 1233 aa12□□□□□ -0.49
BRCA1-222ENST00000493919 SKIDA1Q1XH10 827 aa12□□□□□ -0.49
BRCA1-222ENST00000493919 EPC2Q52LR7 807 aa12□□□□□ -0.49
BRCA1-222ENST00000493919 NAA35Q5VZE5 725 aa12□□□□□ -0.49
BRCA1-222ENST00000493919 SPECC1LQ69YQ0 1117 aa12□□□□□ -0.49
BRCA1-222ENST00000493919 GPR153Q6NV75 609 aa12□□□□□ -0.49
BRCA1-222ENST00000493919 ARMCX5Q6P1M9 558 aa12□□□□□ -0.49
BRCA1-222ENST00000493919 LRRC55Q6ZSA7 311 aa12□□□□□ -0.49
BRCA1-222ENST00000493919 EPM2AIP1Q7L775 607 aaPredicted RBP12□□□□□ -0.49
BRCA1-222ENST00000493919 DDHD1Q8NEL9 900 aa12□□□□□ -0.49
BRCA1-222ENST00000493919 FBXO22Q8NEZ5 403 aa12□□□□□ -0.49
BRCA1-222ENST00000493919 ACAP3Q96P50 834 aa12□□□□□ -0.49
BRCA1-222ENST00000493919 FAM193BQ96PV7 902 aaPredicted RBP12□□□□□ -0.49
BRCA1-222ENST00000493919 SNX25Q9H3E2 840 aa12□□□□□ -0.49
BRCA1-222ENST00000493919 SEMA6BQ9H3T3 888 aa12□□□□□ -0.49
BRCA1-222ENST00000493919 TOPORSQ9NS56 1045 aaPredicted RBP12□□□□□ -0.49
BRCA1-222ENST00000493919 MRPS23Q9Y3D9 190 aaKnown RBP12□□□□□ -0.49
BRCA1-222ENST00000493919 RWDD3Q9Y3V2 267 aa12□□□□□ -0.49
BRCA1-222ENST00000493919 EPN1Q9Y6I3 576 aaPredicted RBP12□□□□□ -0.49
BRCA1-222ENST00000493919 MYO9BQ13459 2157 aa12□□□□□ -0.49
BRCA1-222ENST00000493919 UBE4BO95155 1302 aa12□□□□□ -0.49
BRCA1-222ENST00000493919 CITO14578 2027 aa12□□□□□ -0.49
BRCA1-222ENST00000493919 EPOPA6NHQ4 379 aa11.99□□□□□ -0.49
BRCA1-222ENST00000493919 RFXAPO00287 272 aa11.99□□□□□ -0.49
BRCA1-222ENST00000493919 TRDMT1O14717 391 aaKnown RBP11.99□□□□□ -0.49
BRCA1-222ENST00000493919 APOL1O14791 398 aa11.99□□□□□ -0.49
BRCA1-222ENST00000493919 OGTO15294 1046 aa11.99□□□□□ -0.49
BRCA1-222ENST00000493919 CRYZL1O95825 349 aa11.99□□□□□ -0.49
BRCA1-222ENST00000493919 ZBED1O96006 694 aa11.99□□□□□ -0.49
BRCA1-222ENST00000493919 CYP17A1P05093 508 aa11.99□□□□□ -0.49
BRCA1-222ENST00000493919 CXCL8P10145 99 aa11.99□□□□□ -0.49
BRCA1-222ENST00000493919 LAG3P18627 525 aa11.99□□□□□ -0.49
BRCA1-222ENST00000493919 CTHP32929 405 aa11.99□□□□□ -0.49
BRCA1-222ENST00000493919 KRT20P35900 424 aa11.99□□□□□ -0.49
BRCA1-222ENST00000493919 TNFSF9P41273 254 aa11.99□□□□□ -0.49
BRCA1-222ENST00000493919 ERVK-21P61565 698 aa11.99□□□□□ -0.49
BRCA1-222ENST00000493919 POLR2GP62487 172 aaKnown RBP eCLIP11.99□□□□□ -0.49
BRCA1-222ENST00000493919 CDK18Q07002 472 aa11.99□□□□□ -0.49
BRCA1-222ENST00000493919 STILQ15468 1287 aa11.99□□□□□ -0.49
BRCA1-222ENST00000493919 HSP90AA5PQ58FG0 334 aa11.99□□□□□ -0.49
BRCA1-222ENST00000493919 SLFN12LQ6IEE8 588 aa11.99□□□□□ -0.49
BRCA1-222ENST00000493919 USP51Q70EK9 711 aa11.99□□□□□ -0.49
BRCA1-222ENST00000493919 RASSF3Q86WH2 238 aa11.99□□□□□ -0.49
BRCA1-222ENST00000493919 CROCCP3Q8IVE0 287 aa11.99□□□□□ -0.49
BRCA1-222ENST00000493919 SMYD4Q8IYR2 804 aaPredicted RBP11.99□□□□□ -0.49
BRCA1-222ENST00000493919 NOA1Q8NC60 698 aaKnown RBP11.99□□□□□ -0.49
BRCA1-222ENST00000493919 CDC26Q8NHZ8 85 aa11.99□□□□□ -0.49
BRCA1-222ENST00000493919 CLP1Q92989 425 aaKnown RBP11.99□□□□□ -0.49
BRCA1-222ENST00000493919 CBWD1Q9BRT8 395 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms