RNA–Protein interactions for RNA: ENST00000493853.1

RBM39-238, Transcript of RNA binding motif protein 39, humanhuman

TSL 4

Gene RBM39, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-238ENST00000493853 LOXL4Q96JB6 756 aa7.99□□□□□ -1.13
RBM39-238ENST00000493853 HHIPQ96QV1 700 aa7.99□□□□□ -1.13
RBM39-238ENST00000493853 TTLL2Q9BWV7 592 aa7.99□□□□□ -1.13
RBM39-238ENST00000493853 B3GNT5Q9BYG0 378 aa7.99□□□□□ -1.13
RBM39-238ENST00000493853 KRTAP4-6Q9BYQ5 205 aa7.99□□□□□ -1.13
RBM39-238ENST00000493853 DPEP3Q9H4B8 488 aa7.99□□□□□ -1.13
RBM39-238ENST00000493853 PARD6AQ9NPB6 346 aa7.99□□□□□ -1.13
RBM39-238ENST00000493853 DMAP1Q9NPF5 467 aaPredicted RBP7.99□□□□□ -1.13
RBM39-238ENST00000493853 TPSG1Q9NRR2 321 aa7.99□□□□□ -1.13
RBM39-238ENST00000493853 CFAP97Q9P2B7 532 aa7.99□□□□□ -1.13
RBM39-238ENST00000493853 TBC1D14Q9P2M4 693 aa7.99□□□□□ -1.13
RBM39-238ENST00000493853 SH3BP1Q9Y3L3 701 aa7.99□□□□□ -1.13
RBM39-238ENST00000493853 ATP6V1DQ9Y5K8 247 aa7.99□□□□□ -1.13
RBM39-238ENST00000493853 CPQQ9Y646 472 aa7.99□□□□□ -1.13
RBM39-238ENST00000493853 FAM186AA6NE01 2351 aa7.98□□□□□ -1.13
RBM39-238ENST00000493853 IKBKBO14920 756 aa7.98□□□□□ -1.13
RBM39-238ENST00000493853 AKAP3O75969 853 aa7.98□□□□□ -1.13
RBM39-238ENST00000493853 RHOBTB1O94844 696 aa7.98□□□□□ -1.13
RBM39-238ENST00000493853 APBB3O95704 486 aa7.98□□□□□ -1.13
RBM39-238ENST00000493853 C4BPAP04003 597 aaKnown RBP7.98□□□□□ -1.13
RBM39-238ENST00000493853 NR3C1P04150 777 aa7.98□□□□□ -1.13
RBM39-238ENST00000493853 PFKFB1P16118 471 aa7.98□□□□□ -1.13
RBM39-238ENST00000493853 RPL13P26373 211 aaKnown RBP7.98□□□□□ -1.13
RBM39-238ENST00000493853 GBP1P32455 592 aa7.98□□□□□ -1.13
RBM39-238ENST00000493853 PIK3CAP42336 1068 aa7.98□□□□□ -1.13
RBM39-238ENST00000493853 SYKP43405 635 aa7.98□□□□□ -1.13
RBM39-238ENST00000493853 RAP1GAPP47736 663 aa7.98□□□□□ -1.13
RBM39-238ENST00000493853 PKP1Q13835 747 aa7.98□□□□□ -1.13
RBM39-238ENST00000493853 PREPLQ4J6C6 727 aaPredicted RBP7.98□□□□□ -1.13
RBM39-238ENST00000493853 C2orf27AQ580R0 203 aa7.98□□□□□ -1.13
RBM39-238ENST00000493853 HECTD3Q5T447 861 aa7.98□□□□□ -1.13
RBM39-238ENST00000493853 BTBD8Q5XKL5 378 aa7.98□□□□□ -1.13
RBM39-238ENST00000493853 ACOT1Q86TX2 421 aa7.98□□□□□ -1.13
RBM39-238ENST00000493853 KBTBD6Q86V97 674 aa7.98□□□□□ -1.13
RBM39-238ENST00000493853 TSTD1Q8NFU3 115 aa7.98□□□□□ -1.13
RBM39-238ENST00000493853 RIN3Q8TB24 985 aa7.98□□□□□ -1.13
RBM39-238ENST00000493853 OVCA2Q8WZ82 227 aa7.98□□□□□ -1.13
RBM39-238ENST00000493853 DDX1Q92499 740 aaKnown RBP7.98□□□□□ -1.13
RBM39-238ENST00000493853 EDEM1Q92611 657 aa7.98□□□□□ -1.13
RBM39-238ENST00000493853 TAF4BQ92750 862 aa7.98□□□□□ -1.13
RBM39-238ENST00000493853 SMARCD1Q96GM5 515 aa7.98□□□□□ -1.13
RBM39-238ENST00000493853 KCNK16Q96T55 309 aa7.98□□□□□ -1.13
RBM39-238ENST00000493853 PNKPQ96T60 521 aa7.98□□□□□ -1.13
RBM39-238ENST00000493853 SCAND2PQ9GZW5 306 aaPredicted RBP7.98□□□□□ -1.13
RBM39-238ENST00000493853 RNF38Q9H0F5 515 aa7.98□□□□□ -1.13
RBM39-238ENST00000493853 XYLT2Q9H1B5 865 aa7.98□□□□□ -1.13
RBM39-238ENST00000493853 FBXO44Q9H4M3 255 aa7.98□□□□□ -1.13
RBM39-238ENST00000493853 SMYD3Q9H7B4 428 aa7.98□□□□□ -1.13
RBM39-238ENST00000493853 COMMD8Q9NX08 183 aa7.98□□□□□ -1.13
RBM39-238ENST00000493853 CACNA1IQ9P0X4 2223 aa7.97□□□□□ -1.13
RBM39-238ENST00000493853 EP300Q09472 2414 aaPredicted RBP7.97□□□□□ -1.13
RBM39-238ENST00000493853 E2F8A0AVK6 867 aa7.97□□□□□ -1.13
RBM39-238ENST00000493853 GOLGA6L4A6NEF3 574 aa7.97□□□□□ -1.13
RBM39-238ENST00000493853 PALM2-AKAP2B1ALY0 433 aaPredicted RBP7.97□□□□□ -1.13
RBM39-238ENST00000493853 SCAMP3O14828 347 aaKnown RBP7.97□□□□□ -1.13
RBM39-238ENST00000493853 SLC30A4O14863 429 aa7.97□□□□□ -1.13
RBM39-238ENST00000493853 KLRC4O43908 158 aa7.97□□□□□ -1.13
RBM39-238ENST00000493853 ALDH1A2O94788 518 aa7.97□□□□□ -1.13
RBM39-238ENST00000493853 OAS1P00973 400 aaKnown RBP7.97□□□□□ -1.13
RBM39-238ENST00000493853 APODP05090 189 aa7.97□□□□□ -1.13
RBM39-238ENST00000493853 RPLP1P05386 114 aaKnown RBP7.97□□□□□ -1.13
RBM39-238ENST00000493853 ZNF806P0C7X5 589 aa7.97□□□□□ -1.13
RBM39-238ENST00000493853 NR2F2P24468 414 aa7.97□□□□□ -1.13
RBM39-238ENST00000493853 ADORA2BP29275 332 aa7.97□□□□□ -1.13
RBM39-238ENST00000493853 HOXC13P31276 330 aa7.97□□□□□ -1.13
RBM39-238ENST00000493853 PSMC2P35998 433 aaKnown RBP7.97□□□□□ -1.13
RBM39-238ENST00000493853 VAMP7P51809 220 aa7.97□□□□□ -1.13
RBM39-238ENST00000493853 NDST1P52848 882 aa7.97□□□□□ -1.13
RBM39-238ENST00000493853 SLC5A3P53794 718 aa7.97□□□□□ -1.13
RBM39-238ENST00000493853 CACNA2D1P54289 1103 aa7.97□□□□□ -1.13
RBM39-238ENST00000493853 MAP3K7CLP57077 242 aa7.97□□□□□ -1.13
RBM39-238ENST00000493853 DLG4P78352 724 aa7.97□□□□□ -1.13
RBM39-238ENST00000493853 GAD2Q05329 585 aa7.97□□□□□ -1.13
RBM39-238ENST00000493853 GOLGA8FQ08AF8 430 aa7.97□□□□□ -1.13
RBM39-238ENST00000493853 GOLGA8DPQ0D2H9 430 aa7.97□□□□□ -1.13
RBM39-238ENST00000493853 DHCR24Q15392 516 aa7.97□□□□□ -1.13
RBM39-238ENST00000493853 CCDC6Q16204 474 aa7.97□□□□□ -1.13
RBM39-238ENST00000493853 ANO4Q32M45 955 aa7.97□□□□□ -1.13
RBM39-238ENST00000493853 NAIF1Q69YI7 327 aaPredicted RBP7.97□□□□□ -1.13
RBM39-238ENST00000493853 INTS8Q75QN2 995 aaKnown RBP7.97□□□□□ -1.13
RBM39-238ENST00000493853 ZNF438Q7Z4V0 828 aa7.97□□□□□ -1.13
RBM39-238ENST00000493853 C11orf74Q86VG3 221 aa7.97□□□□□ -1.13
RBM39-238ENST00000493853 UNC93AQ86WB7 457 aa7.97□□□□□ -1.13
RBM39-238ENST00000493853 CCDC33Q8N5R6 958 aa7.97□□□□□ -1.13
RBM39-238ENST00000493853 KIAA1958Q8N8K9 716 aa7.97□□□□□ -1.13
RBM39-238ENST00000493853 KIAA0895Q8NCT3 520 aa7.97□□□□□ -1.13
RBM39-238ENST00000493853 SCAMP5Q8TAC9 235 aa7.97□□□□□ -1.13
RBM39-238ENST00000493853 PLEKHO2Q8TD55 490 aa7.97□□□□□ -1.13
RBM39-238ENST00000493853 USP33Q8TEY7 942 aa7.97□□□□□ -1.13
RBM39-238ENST00000493853 ELMO3Q96BJ8 720 aa7.97□□□□□ -1.13
RBM39-238ENST00000493853 OTUB2Q96DC9 234 aa7.97□□□□□ -1.13
RBM39-238ENST00000493853 MMRN2Q9H8L6 949 aa7.97□□□□□ -1.13
RBM39-238ENST00000493853 TLR8Q9NR97 1041 aaKnown RBP7.97□□□□□ -1.13
RBM39-238ENST00000493853 KRT82Q9NSB4 513 aa7.97□□□□□ -1.13
RBM39-238ENST00000493853 POLR3BQ9NW08 1133 aaPredicted RBP7.97□□□□□ -1.13
RBM39-238ENST00000493853 DMAC2Q9NW81 257 aa7.97□□□□□ -1.13
RBM39-238ENST00000493853 BCCIPQ9P287 314 aaKnown RBP eCLIP7.97□□□□□ -1.13
RBM39-238ENST00000493853 EBF1Q9UH73 591 aa7.97□□□□□ -1.13
RBM39-238ENST00000493853 MAPK8IP1Q9UQF2 711 aa7.97□□□□□ -1.13
RBM39-238ENST00000493853 MIA3Q5JRA6 1907 aa7.96□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms