RNA–Protein interactions for RNA: ENST00000493601.5

PTPRU-208, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 5

Gene PTPRU, Length 695 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-208ENST00000493601 TBXAS1P24557 533 aaPredicted RBP17.4■□□□□ 0.38
PTPRU-208ENST00000493601 ZNF132P52740 706 aa17.4■□□□□ 0.38
PTPRU-208ENST00000493601 ATXN3P54252 364 aaPredicted RBP17.4■□□□□ 0.38
PTPRU-208ENST00000493601 ZNF33AQ06730 810 aa17.4■□□□□ 0.38
PTPRU-208ENST00000493601 STIM1Q13586 685 aa17.4■□□□□ 0.38
PTPRU-208ENST00000493601 ANKRD40Q6AI12 368 aa17.4■□□□□ 0.38
PTPRU-208ENST00000493601 KIAA1324Q6UXG2 1013 aaKnown RBP17.4■□□□□ 0.38
PTPRU-208ENST00000493601 DEFB119Q8N690 84 aa17.4■□□□□ 0.38
PTPRU-208ENST00000493601 SPATA20Q8TB22 786 aa17.4■□□□□ 0.38
PTPRU-208ENST00000493601 SLC35C1Q96A29 364 aa17.4■□□□□ 0.38
PTPRU-208ENST00000493601 ERLEC1Q96DZ1 483 aa17.4■□□□□ 0.38
PTPRU-208ENST00000493601 P2RY11Q96G91 374 aa17.4■□□□□ 0.38
PTPRU-208ENST00000493601 HSPA12BQ96MM6 686 aa17.4■□□□□ 0.38
PTPRU-208ENST00000493601 IPO9Q96P70 1041 aaKnown RBP17.4■□□□□ 0.38
PTPRU-208ENST00000493601 ULBP1Q9BZM6 244 aa17.4■□□□□ 0.38
PTPRU-208ENST00000493601 LRRC4Q9HBW1 653 aa17.4■□□□□ 0.38
PTPRU-208ENST00000493601 SLC6A14Q9UN76 642 aa17.4■□□□□ 0.38
PTPRU-208ENST00000493601 STON1Q9Y6Q2 735 aa17.4■□□□□ 0.38
PTPRU-208ENST00000493601 ADAMTS9Q9P2N4 1935 aa17.4■□□□□ 0.38
PTPRU-208ENST00000493601 PCDH15Q96QU1 1955 aa17.4■□□□□ 0.38
PTPRU-208ENST00000493601 ASCC3Q8N3C0 2202 aaKnown RBP17.4■□□□□ 0.38
PTPRU-208ENST00000493601 GON4LQ3T8J9 2241 aa17.39■□□□□ 0.37
PTPRU-208ENST00000493601 PSMA7O14818 248 aa17.39■□□□□ 0.37
PTPRU-208ENST00000493601 SETSIPP0DME0 302 aa17.39■□□□□ 0.37
PTPRU-208ENST00000493601 CD19P15391 556 aa17.39■□□□□ 0.37
PTPRU-208ENST00000493601 HARS2P49590 506 aaKnown RBP17.39■□□□□ 0.37
PTPRU-208ENST00000493601 PMS1P54277 932 aaKnown RBP17.39■□□□□ 0.37
PTPRU-208ENST00000493601 PDE4CQ08493 712 aa17.39■□□□□ 0.37
PTPRU-208ENST00000493601 ADIGQ0VDE8 80 aa17.39■□□□□ 0.37
PTPRU-208ENST00000493601 EIF4HQ15056 248 aaKnown RBP17.39■□□□□ 0.37
PTPRU-208ENST00000493601 GEN1Q17RS7 908 aa17.39■□□□□ 0.37
PTPRU-208ENST00000493601 FAM217AQ8IXS0 508 aa17.39■□□□□ 0.37
PTPRU-208ENST00000493601 SIX6OS1Q8N1H7 587 aa17.39■□□□□ 0.37
PTPRU-208ENST00000493601 DDI1Q8WTU0 396 aa17.39■□□□□ 0.37
PTPRU-208ENST00000493601 SLC2A11Q9BYW1 496 aa17.39■□□□□ 0.37
PTPRU-208ENST00000493601 SLC6A17Q9H1V8 727 aa17.39■□□□□ 0.37
PTPRU-208ENST00000493601 SLC32A1Q9H598 525 aa17.39■□□□□ 0.37
PTPRU-208ENST00000493601 CAPN10Q9HC96 672 aa17.39■□□□□ 0.37
PTPRU-208ENST00000493601 METTL14Q9HCE5 456 aaKnown RBP17.39■□□□□ 0.37
PTPRU-208ENST00000493601 THAP10Q9P2Z0 257 aaPredicted RBP17.39■□□□□ 0.37
PTPRU-208ENST00000493601 KIAA1257Q9ULG3 409 aa17.39■□□□□ 0.37
PTPRU-208ENST00000493601 CKAP5Q14008 2032 aa17.38■□□□□ 0.37
PTPRU-208ENST00000493601 TRIM49BA6NDI0 452 aa17.38■□□□□ 0.37
PTPRU-208ENST00000493601 WASH3PC4AMC7 463 aa17.38■□□□□ 0.37
PTPRU-208ENST00000493601 TULP2O00295 520 aa17.38■□□□□ 0.37
PTPRU-208ENST00000493601 VDRP11473 427 aa17.38■□□□□ 0.37
PTPRU-208ENST00000493601 ZNF445P59923 1031 aa17.38■□□□□ 0.37
PTPRU-208ENST00000493601 ENPP2Q13822 863 aa17.38■□□□□ 0.37
PTPRU-208ENST00000493601 TRIP4Q15650 581 aaPredicted RBP17.38■□□□□ 0.37
PTPRU-208ENST00000493601 FUT11Q495W5 492 aa17.38■□□□□ 0.37
PTPRU-208ENST00000493601 SYCP2LQ5T4T6 812 aa17.38■□□□□ 0.37
PTPRU-208ENST00000493601 BHLHA9Q7RTU4 235 aa17.38■□□□□ 0.37
PTPRU-208ENST00000493601 FMNL3Q8IVF7 1028 aa17.38■□□□□ 0.37
PTPRU-208ENST00000493601 SLC41A1Q8IVJ1 513 aa17.38■□□□□ 0.37
PTPRU-208ENST00000493601 HDDC3Q8N4P3 179 aa17.38■□□□□ 0.37
PTPRU-208ENST00000493601 TRIML1Q8N9V2 468 aa17.38■□□□□ 0.37
PTPRU-208ENST00000493601 DEFB124Q8NES8 71 aa17.38■□□□□ 0.37
PTPRU-208ENST00000493601 ENGASEQ8NFI3 743 aa17.38■□□□□ 0.37
PTPRU-208ENST00000493601 RNF139Q8WU17 664 aa17.38■□□□□ 0.37
PTPRU-208ENST00000493601 FOXJ1Q92949 421 aa17.38■□□□□ 0.37
PTPRU-208ENST00000493601 PIWIL1Q96J94 861 aaKnown RBP17.38■□□□□ 0.37
PTPRU-208ENST00000493601 TIGD1Q96MW7 591 aa17.38■□□□□ 0.37
PTPRU-208ENST00000493601 GTPBP2Q9BX10 602 aaKnown RBP17.38■□□□□ 0.37
PTPRU-208ENST00000493601 PRDM16Q9HAZ2 1276 aa17.38■□□□□ 0.37
PTPRU-208ENST00000493601 HBS1LQ9Y450 684 aaKnown RBP17.38■□□□□ 0.37
PTPRU-208ENST00000493601 UPK3BL1B0FP48 263 aa17.37■□□□□ 0.37
PTPRU-208ENST00000493601 UPK3BL2E5RIL1 263 aa17.37■□□□□ 0.37
PTPRU-208ENST00000493601 O00370 1275 aa17.37■□□□□ 0.37
PTPRU-208ENST00000493601 SYNCRIPO60506 623 aaKnown RBP17.37■□□□□ 0.37
PTPRU-208ENST00000493601 CD6P30203 668 aa17.37■□□□□ 0.37
PTPRU-208ENST00000493601 PPP1R2P41236 205 aa17.37■□□□□ 0.37
PTPRU-208ENST00000493601 IL12RB1P42701 662 aa17.37■□□□□ 0.37
PTPRU-208ENST00000493601 FOXC1Q12948 553 aa17.37■□□□□ 0.37
PTPRU-208ENST00000493601 BECN1Q14457 450 aa17.37■□□□□ 0.37
PTPRU-208ENST00000493601 METTL3Q86U44 580 aaKnown RBP17.37■□□□□ 0.37
PTPRU-208ENST00000493601 SCML4Q8N228 414 aa17.37■□□□□ 0.37
PTPRU-208ENST00000493601 UBR7Q8N806 425 aa17.37■□□□□ 0.37
PTPRU-208ENST00000493601 KCTD13Q8WZ19 329 aa17.37■□□□□ 0.37
PTPRU-208ENST00000493601 ERCC4Q92889 916 aaPredicted RBP17.37■□□□□ 0.37
PTPRU-208ENST00000493601 CEP63Q96MT8 703 aa17.37■□□□□ 0.37
PTPRU-208ENST00000493601 CNGB3Q9NQW8 809 aa17.37■□□□□ 0.37
PTPRU-208ENST00000493601 ELOVL2Q9NXB9 296 aa17.37■□□□□ 0.37
PTPRU-208ENST00000493601 USP36Q9P275 1121 aaKnown RBP17.37■□□□□ 0.37
PTPRU-208ENST00000493601 SUSD2Q9UGT4 822 aa17.37■□□□□ 0.37
PTPRU-208ENST00000493601 CFAP47Q6ZTR5 3102 aa17.36■□□□□ 0.37
PTPRU-208ENST00000493601 TIMM44O43615 452 aa17.36■□□□□ 0.37
PTPRU-208ENST00000493601 OPHN1O60890 802 aa17.36■□□□□ 0.37
PTPRU-208ENST00000493601 LATS1O95835 1130 aa17.36■□□□□ 0.37
PTPRU-208ENST00000493601 SYPP08247 313 aa17.36■□□□□ 0.37
PTPRU-208ENST00000493601 PAEPP09466 180 aa17.36■□□□□ 0.37
PTPRU-208ENST00000493601 GNSP15586 552 aa17.36■□□□□ 0.37
PTPRU-208ENST00000493601 FMO5P49326 533 aa17.36■□□□□ 0.37
PTPRU-208ENST00000493601 NUCB2P80303 420 aa17.36■□□□□ 0.37
PTPRU-208ENST00000493601 ARID5AQ03989 594 aa17.36■□□□□ 0.37
PTPRU-208ENST00000493601 LRMPQ12912 555 aa17.36■□□□□ 0.37
PTPRU-208ENST00000493601 ZNF234Q14588 700 aa17.36■□□□□ 0.37
PTPRU-208ENST00000493601 MPPE1Q53F39 396 aa17.36■□□□□ 0.37
PTPRU-208ENST00000493601 WDR45BQ5MNZ6 344 aa17.36■□□□□ 0.37
PTPRU-208ENST00000493601 BSPRYQ5W0U4 402 aa17.36■□□□□ 0.37
PTPRU-208ENST00000493601 RGL4Q8IZJ4 473 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms