RNA–Protein interactions for RNA: ENST00000493379.1

VPS52-219, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 786 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-219ENST00000493379 GRASPQ7Z6J2 395 aaPredicted RBP7.12□□□□□ -1.27
VPS52-219ENST00000493379 ACOT1Q86TX2 421 aa7.12□□□□□ -1.27
VPS52-219ENST00000493379 ITIH5Q86UX2 942 aa7.12□□□□□ -1.27
VPS52-219ENST00000493379 SPATA2LQ8IUW3 424 aaPredicted RBP7.12□□□□□ -1.27
VPS52-219ENST00000493379 SCML4Q8N228 414 aa7.12□□□□□ -1.27
VPS52-219ENST00000493379 ANKRD52Q8NB46 1076 aa7.12□□□□□ -1.27
VPS52-219ENST00000493379 MYLPFQ96A32 169 aa7.12□□□□□ -1.27
VPS52-219ENST00000493379 ELMO3Q96BJ8 720 aa7.12□□□□□ -1.27
VPS52-219ENST00000493379 CYFIP2Q96F07 1278 aa7.12□□□□□ -1.27
VPS52-219ENST00000493379 PGLYRP2Q96PD5 576 aa7.12□□□□□ -1.27
VPS52-219ENST00000493379 ZSWIM1Q9BR11 485 aa7.12□□□□□ -1.27
VPS52-219ENST00000493379 INTS2Q9H0H0 1204 aaKnown RBP7.12□□□□□ -1.27
VPS52-219ENST00000493379 CUEDC1Q9NWM3 386 aaPredicted RBP7.12□□□□□ -1.27
VPS52-219ENST00000493379 KCNK4Q9NYG8 393 aa7.12□□□□□ -1.27
VPS52-219ENST00000493379 DLGAP2Q9P1A6 1054 aa7.12□□□□□ -1.27
VPS52-219ENST00000493379 APEX2Q9UBZ4 518 aa7.12□□□□□ -1.27
VPS52-219ENST00000493379 HMGXB4Q9UGU5 601 aa7.12□□□□□ -1.27
VPS52-219ENST00000493379 WASF3Q9UPY6 502 aa7.12□□□□□ -1.27
VPS52-219ENST00000493379 SIK3Q9Y2K2 1263 aa7.12□□□□□ -1.27
VPS52-219ENST00000493379 NR2E1Q9Y466 385 aa7.12□□□□□ -1.27
VPS52-219ENST00000493379 RAI2Q9Y5P3 530 aa7.12□□□□□ -1.27
VPS52-219ENST00000493379 TSC2P49815 1807 aa7.12□□□□□ -1.27
VPS52-219ENST00000493379 SHROOM3Q8TF72 1996 aa7.11□□□□□ -1.27
VPS52-219ENST00000493379 A0A1W2PP55 124 aa7.11□□□□□ -1.27
VPS52-219ENST00000493379 A0A1W2PQC6 194 aa7.11□□□□□ -1.27
VPS52-219ENST00000493379 LGALS16A8MUM7 142 aa7.11□□□□□ -1.27
VPS52-219ENST00000493379 BECN2A8MW95 431 aa7.11□□□□□ -1.27
VPS52-219ENST00000493379 CCL16O15467 120 aa7.11□□□□□ -1.27
VPS52-219ENST00000493379 NARSO43776 548 aaKnown RBP7.11□□□□□ -1.27
VPS52-219ENST00000493379 KCNK5O95279 499 aa7.11□□□□□ -1.27
VPS52-219ENST00000493379 RARAP10276 462 aa7.11□□□□□ -1.27
VPS52-219ENST00000493379 EDN3P14138 238 aa7.11□□□□□ -1.27
VPS52-219ENST00000493379 UCHL3P15374 230 aa7.11□□□□□ -1.27
VPS52-219ENST00000493379 BDNFP23560 247 aa7.11□□□□□ -1.27
VPS52-219ENST00000493379 CCR2P41597 374 aa7.11□□□□□ -1.27
VPS52-219ENST00000493379 RAP1GAPP47736 663 aa7.11□□□□□ -1.27
VPS52-219ENST00000493379 ST13P50502 369 aaKnown RBP7.11□□□□□ -1.27
VPS52-219ENST00000493379 COPB1P53618 953 aaKnown RBP7.11□□□□□ -1.27
VPS52-219ENST00000493379 CACNA2D1P54289 1103 aa7.11□□□□□ -1.27
VPS52-219ENST00000493379 MFAP3P55082 362 aa7.11□□□□□ -1.27
VPS52-219ENST00000493379 PSMC1P62191 440 aaKnown RBP7.11□□□□□ -1.27
VPS52-219ENST00000493379 NR1I3Q14994 352 aa7.11□□□□□ -1.27
VPS52-219ENST00000493379 LAPTM4AQ15012 233 aa7.11□□□□□ -1.27
VPS52-219ENST00000493379 STILQ15468 1287 aa7.11□□□□□ -1.27
VPS52-219ENST00000493379 CCDC142Q17RM4 750 aa7.11□□□□□ -1.27
VPS52-219ENST00000493379 SLC5A9Q2M3M2 681 aa7.11□□□□□ -1.27
VPS52-219ENST00000493379 MGAT5BQ3V5L5 792 aa7.11□□□□□ -1.27
VPS52-219ENST00000493379 PABPC1LQ4VXU2 614 aaKnown RBP7.11□□□□□ -1.27
VPS52-219ENST00000493379 MDH1BQ5I0G3 518 aa7.11□□□□□ -1.27
VPS52-219ENST00000493379 CYP4A22Q5TCH4 519 aa7.11□□□□□ -1.27
VPS52-219ENST00000493379 IL31Q6EBC2 164 aa7.11□□□□□ -1.27
VPS52-219ENST00000493379 IQCEQ6IPM2 695 aa7.11□□□□□ -1.27
VPS52-219ENST00000493379 LCLAT1Q6UWP7 414 aa7.11□□□□□ -1.27
VPS52-219ENST00000493379 FAM35AQ86V20 835 aa7.11□□□□□ -1.27
VPS52-219ENST00000493379 ARHGEF19Q8IW93 802 aa7.11□□□□□ -1.27
VPS52-219ENST00000493379 FAM71AQ8IYT1 594 aa7.11□□□□□ -1.27
VPS52-219ENST00000493379 C12orf29Q8N999 325 aa7.11□□□□□ -1.27
VPS52-219ENST00000493379 SLC35F5Q8WV83 523 aa7.11□□□□□ -1.27
VPS52-219ENST00000493379 OVCA2Q8WZ82 227 aa7.11□□□□□ -1.27
VPS52-219ENST00000493379 FGF13Q92913 245 aa7.11□□□□□ -1.27
VPS52-219ENST00000493379 KAT5Q92993 513 aa7.11□□□□□ -1.27
VPS52-219ENST00000493379 SMARCD1Q96GM5 515 aa7.11□□□□□ -1.27
VPS52-219ENST00000493379 KCNK16Q96T55 309 aa7.11□□□□□ -1.27
VPS52-219ENST00000493379 SMOQ99835 787 aa7.11□□□□□ -1.27
VPS52-219ENST00000493379 LPIN3Q9BQK8 851 aa7.11□□□□□ -1.27
VPS52-219ENST00000493379 CRACR2AQ9BSW2 395 aa7.11□□□□□ -1.27
VPS52-219ENST00000493379 DUSP16Q9BY84 665 aa7.11□□□□□ -1.27
VPS52-219ENST00000493379 STK33Q9BYT3 514 aa7.11□□□□□ -1.27
VPS52-219ENST00000493379 ZNF518BQ9C0D4 1074 aa7.11□□□□□ -1.27
VPS52-219ENST00000493379 DNAI2Q9GZS0 605 aa7.11□□□□□ -1.27
VPS52-219ENST00000493379 CCSER2Q9H7U1 834 aa7.11□□□□□ -1.27
VPS52-219ENST00000493379 MMRN2Q9H8L6 949 aa7.11□□□□□ -1.27
VPS52-219ENST00000493379 CBX8Q9HC52 389 aa7.11□□□□□ -1.27
VPS52-219ENST00000493379 UBE2TQ9NPD8 197 aaPredicted RBP7.11□□□□□ -1.27
VPS52-219ENST00000493379 LATS2Q9NRM7 1088 aa7.11□□□□□ -1.27
VPS52-219ENST00000493379 HCFC1R1Q9NWW0 138 aa7.11□□□□□ -1.27
VPS52-219ENST00000493379 OBP2AQ9NY56 170 aa7.11□□□□□ -1.27
VPS52-219ENST00000493379 EHD2Q9NZN4 543 aa7.11□□□□□ -1.27
VPS52-219ENST00000493379 MARK1Q9P0L2 795 aa7.11□□□□□ -1.27
VPS52-219ENST00000493379 GCNT4Q9P109 453 aa7.11□□□□□ -1.27
VPS52-219ENST00000493379 UXTQ9UBK9 157 aaPredicted RBP7.11□□□□□ -1.27
VPS52-219ENST00000493379 SALL4Q9UJQ4 1053 aa7.11□□□□□ -1.27
VPS52-219ENST00000493379 GMEB2Q9UKD1 530 aa7.11□□□□□ -1.27
VPS52-219ENST00000493379 CDH7Q9ULB5 785 aa7.11□□□□□ -1.27
VPS52-219ENST00000493379 SLC38A8A6NNN8 435 aa7.1□□□□□ -1.27
VPS52-219ENST00000493379 F8VP50 259 aa7.1□□□□□ -1.27
VPS52-219ENST00000493379 O00370 1275 aa7.1□□□□□ -1.27
VPS52-219ENST00000493379 FOXN3O00409 490 aaPredicted RBP7.1□□□□□ -1.27
VPS52-219ENST00000493379 CLDN5O00501 218 aa7.1□□□□□ -1.27
VPS52-219ENST00000493379 TM4SF5O14894 197 aa7.1□□□□□ -1.27
VPS52-219ENST00000493379 BEST1O76090 585 aa7.1□□□□□ -1.27
VPS52-219ENST00000493379 OLFM2O95897 454 aa7.1□□□□□ -1.27
VPS52-219ENST00000493379 ATP1A3P13637 1013 aa7.1□□□□□ -1.27
VPS52-219ENST00000493379 TRIM21P19474 475 aaKnown RBP7.1□□□□□ -1.27
VPS52-219ENST00000493379 NFKB1P19838 968 aa7.1□□□□□ -1.27
VPS52-219ENST00000493379 DDX6P26196 483 aaKnown RBP eCLIP7.1□□□□□ -1.27
VPS52-219ENST00000493379 CDC25CP30307 473 aa7.1□□□□□ -1.27
VPS52-219ENST00000493379 SOX18P35713 384 aa7.1□□□□□ -1.27
VPS52-219ENST00000493379 PBX1P40424 430 aa7.1□□□□□ -1.27
VPS52-219ENST00000493379 GPD2P43304 727 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms