RNA–Protein interactions for RNA: ENST00000493265.2

LIME1-208, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 2

Gene LIME1, Length 661 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-208ENST00000493265 MSANTD2Q6P1R3 559 aa17.91■□□□□ 0.46
LIME1-208ENST00000493265 BEND5Q7L4P6 421 aa17.91■□□□□ 0.46
LIME1-208ENST00000493265 ARID3BQ8IVW6 561 aaPredicted RBP17.91■□□□□ 0.46
LIME1-208ENST00000493265 FAM172AQ8WUF8 416 aa17.91■□□□□ 0.46
LIME1-208ENST00000493265 NPY6RQ99463 290 aa17.91■□□□□ 0.46
LIME1-208ENST00000493265 CNPY3Q9BT09 278 aa17.91■□□□□ 0.46
LIME1-208ENST00000493265 ADAM33Q9BZ11 813 aa17.91■□□□□ 0.46
LIME1-208ENST00000493265 SMOC2Q9H3U7 446 aa17.91■□□□□ 0.46
LIME1-208ENST00000493265 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.91■□□□□ 0.46
LIME1-208ENST00000493265 SALL4Q9UJQ4 1053 aa17.91■□□□□ 0.46
LIME1-208ENST00000493265 CCL26Q9Y258 94 aa17.91■□□□□ 0.46
LIME1-208ENST00000493265 PRAMEF12O95522 483 aa17.9■□□□□ 0.46
LIME1-208ENST00000493265 DESP17661 470 aa17.9■□□□□ 0.46
LIME1-208ENST00000493265 SSR1P43307 286 aaKnown RBP17.9■□□□□ 0.46
LIME1-208ENST00000493265 ATXN1P54253 815 aaKnown RBP17.9■□□□□ 0.46
LIME1-208ENST00000493265 TBX4P57082 545 aa17.9■□□□□ 0.46
LIME1-208ENST00000493265 ZNF252P-AS1Q0IIN9 211 aa17.9■□□□□ 0.46
LIME1-208ENST00000493265 ARHGAP29Q52LW3 1261 aa17.9■□□□□ 0.46
LIME1-208ENST00000493265 OTUD1Q5VV17 481 aaPredicted RBP17.9■□□□□ 0.46
LIME1-208ENST00000493265 DAB2IPQ5VWQ8 1189 aa17.9■□□□□ 0.46
LIME1-208ENST00000493265 ARCQ7LC44 396 aa17.9■□□□□ 0.46
LIME1-208ENST00000493265 ASIC4Q96FT7 647 aa17.9■□□□□ 0.46
LIME1-208ENST00000493265 SERPINB11Q96P15 392 aa17.9■□□□□ 0.46
LIME1-208ENST00000493265 TSGA10Q9BZW7 698 aa17.9■□□□□ 0.46
LIME1-208ENST00000493265 FAM86C1Q9NVL1 165 aa17.9■□□□□ 0.46
LIME1-208ENST00000493265 RRN3Q9NYV6 651 aa17.9■□□□□ 0.46
LIME1-208ENST00000493265 GDE1Q9NZC3 331 aa17.9■□□□□ 0.46
LIME1-208ENST00000493265 CALCOCO1Q9P1Z2 691 aa17.9■□□□□ 0.46
LIME1-208ENST00000493265 IP6K2Q9UHH9 426 aa17.9■□□□□ 0.46
LIME1-208ENST00000493265 DENND4AQ7Z401 1863 aa17.89■□□□□ 0.45
LIME1-208ENST00000493265 A0A0A6YYK5 440 aaPredicted RBP17.89■□□□□ 0.45
LIME1-208ENST00000493265 DPYSL4O14531 572 aa17.89■□□□□ 0.45
LIME1-208ENST00000493265 ZSCAN12O43309 604 aa17.89■□□□□ 0.45
LIME1-208ENST00000493265 KRT86O43790 486 aa17.89■□□□□ 0.45
LIME1-208ENST00000493265 MOCS3O95396 460 aa17.89■□□□□ 0.45
LIME1-208ENST00000493265 OLFM2O95897 454 aa17.89■□□□□ 0.45
LIME1-208ENST00000493265 VIPR2P41587 438 aa17.89■□□□□ 0.45
LIME1-208ENST00000493265 ARHGAP25P42331 645 aa17.89■□□□□ 0.45
LIME1-208ENST00000493265 PTPN9P43378 593 aa17.89■□□□□ 0.45
LIME1-208ENST00000493265 SLC7A9P82251 487 aa17.89■□□□□ 0.45
LIME1-208ENST00000493265 SCYL2Q6P3W7 929 aa17.89■□□□□ 0.45
LIME1-208ENST00000493265 KLHDC10Q6PID8 442 aa17.89■□□□□ 0.45
LIME1-208ENST00000493265 SND1Q7KZF4 910 aaKnown RBP eCLIP17.89■□□□□ 0.45
LIME1-208ENST00000493265 OTOP3Q7RTS5 596 aa17.89■□□□□ 0.45
LIME1-208ENST00000493265 CPNE8Q86YQ8 564 aa17.89■□□□□ 0.45
LIME1-208ENST00000493265 ZNF276Q8N554 614 aa17.89■□□□□ 0.45
LIME1-208ENST00000493265 SH3RF2Q8TEC5 729 aa17.89■□□□□ 0.45
LIME1-208ENST00000493265 SMARCD2Q92925 531 aa17.89■□□□□ 0.45
LIME1-208ENST00000493265 USP13Q92995 863 aaPredicted RBP17.89■□□□□ 0.45
LIME1-208ENST00000493265 WBP2Q969T9 261 aa17.89■□□□□ 0.45
LIME1-208ENST00000493265 ACSF2Q96CM8 615 aaPredicted RBP17.89■□□□□ 0.45
LIME1-208ENST00000493265 PRRX2Q99811 253 aa17.89■□□□□ 0.45
LIME1-208ENST00000493265 KLF16Q9BXK1 252 aaPredicted RBP17.89■□□□□ 0.45
LIME1-208ENST00000493265 PIGVQ9NUD9 493 aa17.89■□□□□ 0.45
LIME1-208ENST00000493265 TDP1Q9NUW8 608 aa17.89■□□□□ 0.45
LIME1-208ENST00000493265 CFAP97Q9P2B7 532 aa17.89■□□□□ 0.45
LIME1-208ENST00000493265 USP34Q70CQ2 3546 aa17.88■□□□□ 0.45
LIME1-208ENST00000493265 LEFTY2O00292 366 aa17.88■□□□□ 0.45
LIME1-208ENST00000493265 IRAK2O43187 625 aa17.88■□□□□ 0.45
LIME1-208ENST00000493265 MTA2O94776 668 aa17.88■□□□□ 0.45
LIME1-208ENST00000493265 MOCS2O96007 188 aaPredicted RBP17.88■□□□□ 0.45
LIME1-208ENST00000493265 LAMP2P13473 410 aa17.88■□□□□ 0.45
LIME1-208ENST00000493265 PFKLP17858 780 aa17.88■□□□□ 0.45
LIME1-208ENST00000493265 RDXP35241 583 aaKnown RBP17.88■□□□□ 0.45
LIME1-208ENST00000493265 COG7P83436 770 aa17.88■□□□□ 0.45
LIME1-208ENST00000493265 ZXDBP98169 803 aa17.88■□□□□ 0.45
LIME1-208ENST00000493265 TRIP4Q15650 581 aaPredicted RBP17.88■□□□□ 0.45
LIME1-208ENST00000493265 ZC3H12AQ5D1E8 599 aaKnown RBP17.88■□□□□ 0.45
LIME1-208ENST00000493265 FAM131BQ86XD5 332 aa17.88■□□□□ 0.45
LIME1-208ENST00000493265 C17orf53Q8N3J3 647 aaPredicted RBP17.88■□□□□ 0.45
LIME1-208ENST00000493265 TDRD5Q8NAT2 981 aaKnown RBP17.88■□□□□ 0.45
LIME1-208ENST00000493265 NT5C3BQ969T7 300 aa17.88■□□□□ 0.45
LIME1-208ENST00000493265 ZFRQ96KR1 1074 aaKnown RBP17.88■□□□□ 0.45
LIME1-208ENST00000493265 ASB16Q96NS5 453 aa17.88■□□□□ 0.45
LIME1-208ENST00000493265 GOLPH3Q9H4A6 298 aa17.88■□□□□ 0.45
LIME1-208ENST00000493265 PCSK1NQ9UHG2 260 aa17.88■□□□□ 0.45
LIME1-208ENST00000493265 ZMYM5Q9UJ78 669 aa17.88■□□□□ 0.45
LIME1-208ENST00000493265 HYOU1Q9Y4L1 999 aa17.88■□□□□ 0.45
LIME1-208ENST00000493265 USP27XA6NNY8 438 aa17.87■□□□□ 0.45
LIME1-208ENST00000493265 SOBPA7XYQ1 873 aa17.87■□□□□ 0.45
LIME1-208ENST00000493265 BTNL10A8MVZ5 291 aa17.87■□□□□ 0.45
LIME1-208ENST00000493265 C2CD4DB7Z1M9 353 aa17.87■□□□□ 0.45
LIME1-208ENST00000493265 BUB1BO60566 1050 aaPredicted RBP17.87■□□□□ 0.45
LIME1-208ENST00000493265 RNF8O76064 485 aa17.87■□□□□ 0.45
LIME1-208ENST00000493265 PROSCO94903 275 aa17.87■□□□□ 0.45
LIME1-208ENST00000493265 PDGFBP01127 241 aaPredicted RBP17.87■□□□□ 0.45
LIME1-208ENST00000493265 TNNT1P13805 278 aa17.87■□□□□ 0.45
LIME1-208ENST00000493265 DEKP35659 375 aaKnown RBP17.87■□□□□ 0.45
LIME1-208ENST00000493265 GJC1P36383 396 aa17.87■□□□□ 0.45
LIME1-208ENST00000493265 PIGHQ14442 188 aaPredicted RBP17.87■□□□□ 0.45
LIME1-208ENST00000493265 TCEAL1Q15170 157 aa17.87■□□□□ 0.45
LIME1-208ENST00000493265 TPCN2Q8NHX9 752 aa17.87■□□□□ 0.45
LIME1-208ENST00000493265 FNIP1Q8TF40 1166 aa17.87■□□□□ 0.45
LIME1-208ENST00000493265 RSPRY1Q96DX4 576 aa17.87■□□□□ 0.45
LIME1-208ENST00000493265 KXD1Q9BQD3 176 aa17.87■□□□□ 0.45
LIME1-208ENST00000493265 ARHGAP26Q9UNA1 814 aa17.87■□□□□ 0.45
LIME1-208ENST00000493265 TLR6Q9Y2C9 796 aa17.87■□□□□ 0.45
LIME1-208ENST00000493265 SH3BP1Q9Y3L3 701 aa17.87■□□□□ 0.45
LIME1-208ENST00000493265 HBS1LQ9Y450 684 aaKnown RBP17.87■□□□□ 0.45
LIME1-208ENST00000493265 STC2O76061 302 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms