RNA–Protein interactions for RNA: ENST00000493161.1

SAMM50-204, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 3

Gene SAMM50, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-204ENST00000493161 BAHD1Q8TBE0 780 aaPredicted RBP14.39□□□□□ -0.11
SAMM50-204ENST00000493161 HNRNPLLQ8WVV9 542 aaKnown RBP14.39□□□□□ -0.11
SAMM50-204ENST00000493161 SIPA1Q96FS4 1042 aa14.39□□□□□ -0.11
SAMM50-204ENST00000493161 ZNF396Q96N95 335 aaPredicted RBP14.39□□□□□ -0.11
SAMM50-204ENST00000493161 ZDHHC5Q9C0B5 715 aa14.39□□□□□ -0.11
SAMM50-204ENST00000493161 KCTD10Q9H3F6 313 aa14.39□□□□□ -0.11
SAMM50-204ENST00000493161 MAGEF1Q9HAY2 307 aa14.39□□□□□ -0.11
SAMM50-204ENST00000493161 TM7SF3Q9NS93 570 aa14.39□□□□□ -0.11
SAMM50-204ENST00000493161 RASAL2Q9UJF2 1139 aa14.39□□□□□ -0.11
SAMM50-204ENST00000493161 AGO1Q9UL18 857 aaKnown RBP14.39□□□□□ -0.11
SAMM50-204ENST00000493161 APOBEC2Q9Y235 224 aaKnown RBP14.39□□□□□ -0.11
SAMM50-204ENST00000493161 BTBD3Q9Y2F9 522 aa14.39□□□□□ -0.11
SAMM50-204ENST00000493161 PTPRBP23467 1997 aa14.38□□□□□ -0.11
SAMM50-204ENST00000493161 A0A1B0GVT2 93 aa14.38□□□□□ -0.11
SAMM50-204ENST00000493161 NR3C1P04150 777 aa14.38□□□□□ -0.11
SAMM50-204ENST00000493161 CD58P19256 250 aa14.38□□□□□ -0.11
SAMM50-204ENST00000493161 CSNK1EP49674 416 aaKnown RBP14.38□□□□□ -0.11
SAMM50-204ENST00000493161 EFEMP1Q12805 493 aa14.38□□□□□ -0.11
SAMM50-204ENST00000493161 PPP1R26Q5T8A7 1209 aaPredicted RBP14.38□□□□□ -0.11
SAMM50-204ENST00000493161 CCDC186Q7Z3E2 898 aa14.38□□□□□ -0.11
SAMM50-204ENST00000493161 DENND1CQ8IV53 801 aa14.38□□□□□ -0.11
SAMM50-204ENST00000493161 GOLGA5Q8TBA6 731 aa14.38□□□□□ -0.11
SAMM50-204ENST00000493161 TMC2Q8TDI7 906 aa14.38□□□□□ -0.11
SAMM50-204ENST00000493161 PRCCQ92733 491 aaPredicted RBP14.38□□□□□ -0.11
SAMM50-204ENST00000493161 TAF4BQ92750 862 aa14.38□□□□□ -0.11
SAMM50-204ENST00000493161 NT5C1AQ9BXI3 368 aa14.38□□□□□ -0.11
SAMM50-204ENST00000493161 ELOVL2Q9NXB9 296 aa14.38□□□□□ -0.11
SAMM50-204ENST00000493161 SERTAD1Q9UHV2 236 aa14.38□□□□□ -0.11
SAMM50-204ENST00000493161 PCDHA7Q9UN72 937 aa14.38□□□□□ -0.11
SAMM50-204ENST00000493161 NFE2L3Q9Y4A8 694 aa14.38□□□□□ -0.11
SAMM50-204ENST00000493161 USP3Q9Y6I4 520 aa14.38□□□□□ -0.11
SAMM50-204ENST00000493161 GOLGA8CPA6NN73 597 aa14.37□□□□□ -0.11
SAMM50-204ENST00000493161 SYNCRIPO60506 623 aaKnown RBP14.37□□□□□ -0.11
SAMM50-204ENST00000493161 IGLV3-19P01714 112 aa14.37□□□□□ -0.11
SAMM50-204ENST00000493161 TRIM49P0CI25 452 aa14.37□□□□□ -0.11
SAMM50-204ENST00000493161 TRIM49CP0CI26 452 aa14.37□□□□□ -0.11
SAMM50-204ENST00000493161 HLA-EP13747 358 aa14.37□□□□□ -0.11
SAMM50-204ENST00000493161 MATKP42679 507 aa14.37□□□□□ -0.11
SAMM50-204ENST00000493161 GCLMP48507 274 aa14.37□□□□□ -0.11
SAMM50-204ENST00000493161 PPP3CAQ08209 521 aa14.37□□□□□ -0.11
SAMM50-204ENST00000493161 KMT5BQ4FZB7 885 aa14.37□□□□□ -0.11
SAMM50-204ENST00000493161 RESP18Q5W5W9 173 aa14.37□□□□□ -0.11
SAMM50-204ENST00000493161 CEP135Q66GS9 1140 aa14.37□□□□□ -0.11
SAMM50-204ENST00000493161 DBX2Q6ZNG2 339 aa14.37□□□□□ -0.11
SAMM50-204ENST00000493161 TAS1R2Q8TE23 839 aa14.37□□□□□ -0.11
SAMM50-204ENST00000493161 BBC3Q96PG8 261 aaPredicted RBP14.37□□□□□ -0.11
SAMM50-204ENST00000493161 DUSP16Q9BY84 665 aa14.37□□□□□ -0.11
SAMM50-204ENST00000493161 BACH2Q9BYV9 841 aa14.37□□□□□ -0.11
SAMM50-204ENST00000493161 CIPCQ9C0C6 399 aa14.37□□□□□ -0.11
SAMM50-204ENST00000493161 C6orf106Q9H6K1 298 aaPredicted RBP14.37□□□□□ -0.11
SAMM50-204ENST00000493161 PNPLA8Q9NP80 782 aa14.37□□□□□ -0.11
SAMM50-204ENST00000493161 KIAA1522Q9P206 1035 aaPredicted RBP14.37□□□□□ -0.11
SAMM50-204ENST00000493161 KCNK3O14649 394 aa14.36□□□□□ -0.11
SAMM50-204ENST00000493161 IKBKBO14920 756 aa14.36□□□□□ -0.11
SAMM50-204ENST00000493161 ACTN4O43707 911 aaKnown RBP14.36□□□□□ -0.11
SAMM50-204ENST00000493161 DKK1O94907 266 aa14.36□□□□□ -0.11
SAMM50-204ENST00000493161 EPHX1P07099 455 aa14.36□□□□□ -0.11
SAMM50-204ENST00000493161 ZNF883P0CG24 379 aa14.36□□□□□ -0.11
SAMM50-204ENST00000493161 RALAP11233 206 aa14.36□□□□□ -0.11
SAMM50-204ENST00000493161 OXTRP30559 389 aa14.36□□□□□ -0.11
SAMM50-204ENST00000493161 CHKAP35790 457 aa14.36□□□□□ -0.11
SAMM50-204ENST00000493161 ZNF394Q53GI3 561 aa14.36□□□□□ -0.11
SAMM50-204ENST00000493161 LAYNQ6UX15 382 aa14.36□□□□□ -0.11
SAMM50-204ENST00000493161 TMPRSS7Q7RTY8 843 aa14.36□□□□□ -0.11
SAMM50-204ENST00000493161 ANKS1BQ7Z6G8 1248 aa14.36□□□□□ -0.11
SAMM50-204ENST00000493161 ZNF276Q8N554 614 aa14.36□□□□□ -0.11
SAMM50-204ENST00000493161 ZNF366Q8N895 744 aa14.36□□□□□ -0.11
SAMM50-204ENST00000493161 RHBDD1Q8TEB9 315 aa14.36□□□□□ -0.11
SAMM50-204ENST00000493161 TMEM174Q8WUU8 243 aa14.36□□□□□ -0.11
SAMM50-204ENST00000493161 UCMAQ8WVF2 138 aa14.36□□□□□ -0.11
SAMM50-204ENST00000493161 SNX19Q92543 992 aa14.36□□□□□ -0.11
SAMM50-204ENST00000493161 NDRG1Q92597 394 aaKnown RBP14.36□□□□□ -0.11
SAMM50-204ENST00000493161 PAGE5Q96GU1 130 aa14.36□□□□□ -0.11
SAMM50-204ENST00000493161 NUP58Q9BVL2 599 aa14.36□□□□□ -0.11
SAMM50-204ENST00000493161 EXOC1Q9NV70 894 aa14.36□□□□□ -0.11
SAMM50-204ENST00000493161 CLIC5Q9NZA1 410 aa14.36□□□□□ -0.11
SAMM50-204ENST00000493161 ZNF510Q9Y2H8 683 aa14.36□□□□□ -0.11
SAMM50-204ENST00000493161 SNX11Q9Y5W9 270 aa14.36□□□□□ -0.11
SAMM50-204ENST00000493161 IGSF10Q6WRI0 2623 aa14.36□□□□□ -0.11
SAMM50-204ENST00000493161 SLC12A8A0AV02 714 aa14.35□□□□□ -0.11
SAMM50-204ENST00000493161 FAM149AA5PLN7 773 aa14.35□□□□□ -0.11
SAMM50-204ENST00000493161 PDXKO00764 312 aa14.35□□□□□ -0.11
SAMM50-204ENST00000493161 NPC1O15118 1278 aa14.35□□□□□ -0.11
SAMM50-204ENST00000493161 CER1O95813 267 aa14.35□□□□□ -0.11
SAMM50-204ENST00000493161 ACADMP11310 421 aa14.35□□□□□ -0.11
SAMM50-204ENST00000493161 PDIA4P13667 645 aaKnown RBP14.35□□□□□ -0.11
SAMM50-204ENST00000493161 ACSL1P33121 698 aa14.35□□□□□ -0.11
SAMM50-204ENST00000493161 ME1P48163 572 aa14.35□□□□□ -0.11
SAMM50-204ENST00000493161 PSEN1P49768 467 aa14.35□□□□□ -0.11
SAMM50-204ENST00000493161 VAMP7P51809 220 aa14.35□□□□□ -0.11
SAMM50-204ENST00000493161 ZNF132P52740 706 aa14.35□□□□□ -0.11
SAMM50-204ENST00000493161 COG7P83436 770 aa14.35□□□□□ -0.11
SAMM50-204ENST00000493161 KIF19Q2TAC6 998 aa14.35□□□□□ -0.11
SAMM50-204ENST00000493161 KCNT1Q5JUK3 1230 aa14.35□□□□□ -0.11
SAMM50-204ENST00000493161 SERPINA13PQ6UXR4 307 aa14.35□□□□□ -0.11
SAMM50-204ENST00000493161 TADA2BQ86TJ2 420 aa14.35□□□□□ -0.11
SAMM50-204ENST00000493161 DDI1Q8WTU0 396 aa14.35□□□□□ -0.11
SAMM50-204ENST00000493161 CYB5D2Q8WUJ1 264 aa14.35□□□□□ -0.11
SAMM50-204ENST00000493161 CRELD1Q96HD1 420 aa14.35□□□□□ -0.11
SAMM50-204ENST00000493161 LRIG1Q96JA1 1093 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms