RNA–Protein interactions for RNA: ENST00000492851.1

COL6A1-205, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 435 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-205ENST00000492851 CNGA2Q16280 664 aa13.03□□□□□ -0.32
COL6A1-205ENST00000492851 SYCP2LQ5T4T6 812 aa13.03□□□□□ -0.32
COL6A1-205ENST00000492851 BSPRYQ5W0U4 402 aa13.03□□□□□ -0.32
COL6A1-205ENST00000492851 TOGARAM2Q6ZUX3 1019 aa13.03□□□□□ -0.32
COL6A1-205ENST00000492851 ANKS1BQ7Z6G8 1248 aa13.03□□□□□ -0.32
COL6A1-205ENST00000492851 FAM217AQ8IXS0 508 aa13.03□□□□□ -0.32
COL6A1-205ENST00000492851 IRGQQ8WZA9 623 aa13.03□□□□□ -0.32
COL6A1-205ENST00000492851 SLC32A1Q9H598 525 aa13.03□□□□□ -0.32
COL6A1-205ENST00000492851 PLK2Q9NYY3 685 aa13.03□□□□□ -0.32
COL6A1-205ENST00000492851 THAP10Q9P2Z0 257 aaPredicted RBP13.03□□□□□ -0.32
COL6A1-205ENST00000492851 SUSD2Q9UGT4 822 aa13.03□□□□□ -0.32
COL6A1-205ENST00000492851 HCN2Q9UL51 889 aa13.03□□□□□ -0.32
COL6A1-205ENST00000492851 STON1Q9Y6Q2 735 aa13.03□□□□□ -0.32
COL6A1-205ENST00000492851 KIAA1549LQ6ZVL6 1849 aa13.02□□□□□ -0.32
COL6A1-205ENST00000492851 TRIM49BA6NDI0 452 aa13.02□□□□□ -0.33
COL6A1-205ENST00000492851 O00370 1275 aa13.02□□□□□ -0.33
COL6A1-205ENST00000492851 CDX4O14627 284 aaPredicted RBP13.02□□□□□ -0.33
COL6A1-205ENST00000492851 SERPINF2P08697 491 aa13.02□□□□□ -0.33
COL6A1-205ENST00000492851 GNSP15586 552 aa13.02□□□□□ -0.33
COL6A1-205ENST00000492851 NDUFV2P19404 249 aa13.02□□□□□ -0.33
COL6A1-205ENST00000492851 PMLP29590 882 aa13.02□□□□□ -0.33
COL6A1-205ENST00000492851 OXTRP30559 389 aa13.02□□□□□ -0.33
COL6A1-205ENST00000492851 NOVA1P51513 510 aaKnown RBP13.02□□□□□ -0.33
COL6A1-205ENST00000492851 ADIGQ0VDE8 80 aa13.02□□□□□ -0.33
COL6A1-205ENST00000492851 LRMPQ12912 555 aa13.02□□□□□ -0.33
COL6A1-205ENST00000492851 WDR45BQ5MNZ6 344 aa13.02□□□□□ -0.33
COL6A1-205ENST00000492851 ADGRF1Q5T601 910 aa13.02□□□□□ -0.33
COL6A1-205ENST00000492851 PSAPL1Q6NUJ1 521 aa13.02□□□□□ -0.33
COL6A1-205ENST00000492851 TMEM270Q6UE05 265 aa13.02□□□□□ -0.33
COL6A1-205ENST00000492851 ARMCX6Q7L4S7 300 aa13.02□□□□□ -0.33
COL6A1-205ENST00000492851 FMNL3Q8IVF7 1028 aa13.02□□□□□ -0.33
COL6A1-205ENST00000492851 UNC45BQ8IWX7 931 aa13.02□□□□□ -0.33
COL6A1-205ENST00000492851 PPM1KQ8N3J5 372 aa13.02□□□□□ -0.33
COL6A1-205ENST00000492851 BHMTQ93088 406 aa13.02□□□□□ -0.33
COL6A1-205ENST00000492851 TMA16Q96EY4 203 aaKnown RBP13.02□□□□□ -0.33
COL6A1-205ENST00000492851 ZNF419Q96HQ0 510 aaPredicted RBP13.02□□□□□ -0.33
COL6A1-205ENST00000492851 MRGPRX1Q96LB2 322 aa13.02□□□□□ -0.33
COL6A1-205ENST00000492851 HSFY1Q96LI6 401 aa13.02□□□□□ -0.33
COL6A1-205ENST00000492851 FAM81BQ96LP2 452 aa13.02□□□□□ -0.33
COL6A1-205ENST00000492851 ACOX2Q99424 681 aa13.02□□□□□ -0.33
COL6A1-205ENST00000492851 CD248Q9HCU0 757 aa13.02□□□□□ -0.33
COL6A1-205ENST00000492851 ELOVL2Q9NXB9 296 aa13.02□□□□□ -0.33
COL6A1-205ENST00000492851 CACNA2D2Q9NY47 1150 aa13.02□□□□□ -0.33
COL6A1-205ENST00000492851 STOML2Q9UJZ1 356 aa13.02□□□□□ -0.33
COL6A1-205ENST00000492851 MAN1B1Q9UKM7 699 aa13.02□□□□□ -0.33
COL6A1-205ENST00000492851 PLA2G4CQ9UP65 541 aa13.02□□□□□ -0.33
COL6A1-205ENST00000492851 PCDHB4Q9Y5E5 795 aa13.02□□□□□ -0.33
COL6A1-205ENST00000492851 RALGAPA1Q6GYQ0 2036 aa13.01□□□□□ -0.33
COL6A1-205ENST00000492851 IGHV1OR15-9A0A0B4J2B8 117 aa13.01□□□□□ -0.33
COL6A1-205ENST00000492851 UPK3BL1B0FP48 263 aa13.01□□□□□ -0.33
COL6A1-205ENST00000492851 PATE3B3GLJ2 98 aa13.01□□□□□ -0.33
COL6A1-205ENST00000492851 UPK3BL2E5RIL1 263 aa13.01□□□□□ -0.33
COL6A1-205ENST00000492851 SART1O43290 800 aaKnown RBP13.01□□□□□ -0.33
COL6A1-205ENST00000492851 FBXO21O94952 628 aa13.01□□□□□ -0.33
COL6A1-205ENST00000492851 SYPP08247 313 aa13.01□□□□□ -0.33
COL6A1-205ENST00000492851 ENGP17813 658 aa13.01□□□□□ -0.33
COL6A1-205ENST00000492851 ITPKAP23677 461 aa13.01□□□□□ -0.33
COL6A1-205ENST00000492851 RDXP35241 583 aaKnown RBP13.01□□□□□ -0.33
COL6A1-205ENST00000492851 GCNT1Q02742 428 aa13.01□□□□□ -0.33
COL6A1-205ENST00000492851 ENPP2Q13822 863 aa13.01□□□□□ -0.33
COL6A1-205ENST00000492851 MPP7Q5T2T1 576 aa13.01□□□□□ -0.33
COL6A1-205ENST00000492851 NUGGCQ68CJ6 796 aa13.01□□□□□ -0.33
COL6A1-205ENST00000492851 SMYD5Q6GMV2 418 aa13.01□□□□□ -0.33
COL6A1-205ENST00000492851 HDDC3Q8N4P3 179 aa13.01□□□□□ -0.33
COL6A1-205ENST00000492851 UBR7Q8N806 425 aa13.01□□□□□ -0.33
COL6A1-205ENST00000492851 FRMD1Q8N878 549 aa13.01□□□□□ -0.33
COL6A1-205ENST00000492851 EHBP1Q8NDI1 1231 aa13.01□□□□□ -0.33
COL6A1-205ENST00000492851 CADM4Q8NFZ8 388 aa13.01□□□□□ -0.33
COL6A1-205ENST00000492851 UBA3Q8TBC4 463 aa13.01□□□□□ -0.33
COL6A1-205ENST00000492851 WFIKKN2Q8TEU8 576 aa13.01□□□□□ -0.33
COL6A1-205ENST00000492851 SLC35F5Q8WV83 523 aa13.01□□□□□ -0.33
COL6A1-205ENST00000492851 AZIN2Q96A70 460 aa13.01□□□□□ -0.33
COL6A1-205ENST00000492851 PIWIL1Q96J94 861 aaKnown RBP13.01□□□□□ -0.33
COL6A1-205ENST00000492851 DDX50Q9BQ39 737 aaKnown RBP13.01□□□□□ -0.33
COL6A1-205ENST00000492851 TRIM62Q9BVG3 475 aa13.01□□□□□ -0.33
COL6A1-205ENST00000492851 PRDM16Q9HAZ2 1276 aa13.01□□□□□ -0.33
COL6A1-205ENST00000492851 ITM2CQ9NQX7 267 aa13.01□□□□□ -0.33
COL6A1-205ENST00000492851 TMEM74BQ9NUR3 256 aa13.01□□□□□ -0.33
COL6A1-205ENST00000492851 NFE2L3Q9Y4A8 694 aa13.01□□□□□ -0.33
COL6A1-205ENST00000492851 NCOR2Q9Y618 2525 aa13.01□□□□□ -0.33
COL6A1-205ENST00000492851 ATG2BQ96BY7 2078 aa13□□□□□ -0.33
COL6A1-205ENST00000492851 MYO16Q9Y6X6 1858 aa13□□□□□ -0.33
COL6A1-205ENST00000492851 YJEFN3A6XGL0 299 aa13□□□□□ -0.33
COL6A1-205ENST00000492851 E7ENQ6 273 aa13□□□□□ -0.33
COL6A1-205ENST00000492851 IRAK2O43187 625 aa13□□□□□ -0.33
COL6A1-205ENST00000492851 CFIP05156 583 aa13□□□□□ -0.33
COL6A1-205ENST00000492851 ACADMP11310 421 aa13□□□□□ -0.33
COL6A1-205ENST00000492851 LCP1P13796 627 aa13□□□□□ -0.33
COL6A1-205ENST00000492851 CD6P30203 668 aa13□□□□□ -0.33
COL6A1-205ENST00000492851 SLC11A2P49281 568 aa13□□□□□ -0.33
COL6A1-205ENST00000492851 DAOAP59103 153 aa13□□□□□ -0.33
COL6A1-205ENST00000492851 HNRNPDQ14103 355 aaKnown RBP13□□□□□ -0.33
COL6A1-205ENST00000492851 GEN1Q17RS7 908 aa13□□□□□ -0.33
COL6A1-205ENST00000492851 UAP1L1Q3KQV9 507 aa13□□□□□ -0.33
COL6A1-205ENST00000492851 PKDCCQ504Y2 493 aa13□□□□□ -0.33
COL6A1-205ENST00000492851 SH3PXD2AQ5TCZ1 1133 aa13□□□□□ -0.33
COL6A1-205ENST00000492851 ISM2Q6H9L7 571 aa13□□□□□ -0.33
COL6A1-205ENST00000492851 KLHL10Q6JEL2 608 aa13□□□□□ -0.33
COL6A1-205ENST00000492851 KIAA1211LQ6NV74 962 aa13□□□□□ -0.33
COL6A1-205ENST00000492851 TTI2Q6NXR4 508 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms