RNA–Protein interactions for RNA: ENST00000492234.5

AGAP3-223, Transcript of ArfGAP with GTPase domain, ankyrin repeat and PH domain 3, human

TSL 4

Gene AGAP3, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
AGAP3-223	ENST00000492234	DCUN1D2	Q6PH85	259 aa		13.69	□□□□□ -0.22
AGAP3-223	ENST00000492234	ZNF852	Q6ZMS4	543 aa		13.69	□□□□□ -0.22
AGAP3-223	ENST00000492234	TPGS1	Q6ZTW0	290 aa		13.69	□□□□□ -0.22
AGAP3-223	ENST00000492234	SND1	Q7KZF4	910 aa	Known RBP eCLIP	13.69	□□□□□ -0.22
AGAP3-223	ENST00000492234	EMC1	Q8N766	993 aa		13.69	□□□□□ -0.22
AGAP3-223	ENST00000492234	TC2N	Q8N9U0	490 aa		13.69	□□□□□ -0.22
AGAP3-223	ENST00000492234	C3orf20	Q8ND61	904 aa		13.69	□□□□□ -0.22
AGAP3-223	ENST00000492234	FLCN	Q8NFG4	579 aa		13.69	□□□□□ -0.22
AGAP3-223	ENST00000492234	RXFP2	Q8WXD0	754 aa		13.69	□□□□□ -0.22
AGAP3-223	ENST00000492234	PBXIP1	Q96AQ6	731 aa		13.69	□□□□□ -0.22
AGAP3-223	ENST00000492234	ZNF653	Q96CK0	615 aa		13.69	□□□□□ -0.22
AGAP3-223	ENST00000492234	DDX23	Q9BUQ8	820 aa	Known RBP	13.69	□□□□□ -0.22
AGAP3-223	ENST00000492234	NHEJ1	Q9H9Q4	299 aa	Predicted RBP	13.69	□□□□□ -0.22
AGAP3-223	ENST00000492234	SLC12A6	Q9UHW9	1150 aa		13.69	□□□□□ -0.22
AGAP3-223	ENST00000492234	TMEM59L	Q9UK28	342 aa		13.69	□□□□□ -0.22
AGAP3-223	ENST00000492234	AGO1	Q9UL18	857 aa	Known RBP	13.69	□□□□□ -0.22
AGAP3-223	ENST00000492234	TLR6	Q9Y2C9	796 aa		13.69	□□□□□ -0.22
AGAP3-223	ENST00000492234	KIF26A	Q9ULI4	1882 aa	Predicted RBP	13.69	□□□□□ -0.22
AGAP3-223	ENST00000492234	SSU72P8	A0A1W2PR75	194 aa		13.68	□□□□□ -0.22
AGAP3-223	ENST00000492234	OTOL1	A6NHN0	477 aa	Predicted RBP	13.68	□□□□□ -0.22
AGAP3-223	ENST00000492234	SIGLEC16	A6NMB1	481 aa		13.68	□□□□□ -0.22
AGAP3-223	ENST00000492234	GOLGA6L6	A8MZA4	724 aa		13.68	□□□□□ -0.22
AGAP3-223	ENST00000492234	SPECC1L-ADORA2A	F8WAN1	911 aa		13.68	□□□□□ -0.22
AGAP3-223	ENST00000492234	MAN2B1	O00754	1011 aa		13.68	□□□□□ -0.22
AGAP3-223	ENST00000492234	TRDMT1	O14717	391 aa	Known RBP	13.68	□□□□□ -0.22
AGAP3-223	ENST00000492234	IRAK2	O43187	625 aa		13.68	□□□□□ -0.22
AGAP3-223	ENST00000492234	ATMIN	O43313	823 aa	Predicted RBP	13.68	□□□□□ -0.22
AGAP3-223	ENST00000492234	ADH1C	P00326	375 aa		13.68	□□□□□ -0.22
AGAP3-223	ENST00000492234	APOE	P02649	317 aa		13.68	□□□□□ -0.22
AGAP3-223	ENST00000492234	GLUL	P15104	373 aa		13.68	□□□□□ -0.22
AGAP3-223	ENST00000492234	ABCB4	P21439	1286 aa		13.68	□□□□□ -0.22
AGAP3-223	ENST00000492234	CDC25B	P30305	580 aa		13.68	□□□□□ -0.22
AGAP3-223	ENST00000492234	CHKA	P35790	457 aa		13.68	□□□□□ -0.22
AGAP3-223	ENST00000492234	FLT3	P36888	993 aa		13.68	□□□□□ -0.22
AGAP3-223	ENST00000492234	ATP11A	P98196	1134 aa		13.68	□□□□□ -0.22
AGAP3-223	ENST00000492234	DEUP1	Q05D60	604 aa		13.68	□□□□□ -0.22
AGAP3-223	ENST00000492234	GFPT1	Q06210	699 aa	Predicted RBP	13.68	□□□□□ -0.22
AGAP3-223	ENST00000492234	MAPK8IP2	Q13387	824 aa	Predicted RBP	13.68	□□□□□ -0.22
AGAP3-223	ENST00000492234	ARID5B	Q14865	1188 aa		13.68	□□□□□ -0.22
AGAP3-223	ENST00000492234	SLC25A52	Q3SY17	297 aa		13.68	□□□□□ -0.22
AGAP3-223	ENST00000492234	LY6G5C	Q5SRR4	150 aa		13.68	□□□□□ -0.22
AGAP3-223	ENST00000492234	RHBDF2	Q6PJF5	856 aa		13.68	□□□□□ -0.22
AGAP3-223	ENST00000492234		Q6ZNB5	142 aa		13.68	□□□□□ -0.22
AGAP3-223	ENST00000492234	TMEM25	Q86YD3	366 aa		13.68	□□□□□ -0.22
AGAP3-223	ENST00000492234	JOSD2	Q8TAC2	188 aa		13.68	□□□□□ -0.22
AGAP3-223	ENST00000492234	FAM3C	Q92520	227 aa		13.68	□□□□□ -0.22
AGAP3-223	ENST00000492234	TRIM11	Q96F44	468 aa		13.68	□□□□□ -0.22
AGAP3-223	ENST00000492234	FCRL2	Q96LA5	508 aa	Predicted RBP	13.68	□□□□□ -0.22
AGAP3-223	ENST00000492234	CFAP57	Q96MR6	1250 aa		13.68	□□□□□ -0.22
AGAP3-223	ENST00000492234	TBCB	Q99426	244 aa		13.68	□□□□□ -0.22
AGAP3-223	ENST00000492234	ISCU	Q9H1K1	167 aa		13.68	□□□□□ -0.22
AGAP3-223	ENST00000492234	TBC1D17	Q9HA65	648 aa		13.68	□□□□□ -0.22
AGAP3-223	ENST00000492234	SPHK2	Q9NRA0	654 aa		13.68	□□□□□ -0.22
AGAP3-223	ENST00000492234	PARVA	Q9NVD7	372 aa		13.68	□□□□□ -0.22
AGAP3-223	ENST00000492234	CNOT8	Q9UFF9	292 aa	Known RBP	13.68	□□□□□ -0.22
AGAP3-223	ENST00000492234	NDRG2	Q9UN36	371 aa	Known RBP	13.68	□□□□□ -0.22
AGAP3-223	ENST00000492234	TSPAN3	O60637	253 aa		13.67	□□□□□ -0.22
AGAP3-223	ENST00000492234	F9	P00740	461 aa		13.67	□□□□□ -0.22
AGAP3-223	ENST00000492234	PDGFB	P01127	241 aa	Predicted RBP	13.67	□□□□□ -0.22
AGAP3-223	ENST00000492234	CYP17A1	P05093	508 aa		13.67	□□□□□ -0.22
AGAP3-223	ENST00000492234	MYBL1	P10243	752 aa		13.67	□□□□□ -0.22
AGAP3-223	ENST00000492234	SLC2A3	P11169	496 aa		13.67	□□□□□ -0.22
AGAP3-223	ENST00000492234	ADH5	P11766	374 aa		13.67	□□□□□ -0.22
AGAP3-223	ENST00000492234	TFE3	P19532	575 aa	Predicted RBP	13.67	□□□□□ -0.22
AGAP3-223	ENST00000492234	SDC4	P31431	198 aa		13.67	□□□□□ -0.22
AGAP3-223	ENST00000492234	CCR1	P32246	355 aa		13.67	□□□□□ -0.22
AGAP3-223	ENST00000492234	GJA4	P35212	333 aa		13.67	□□□□□ -0.22
AGAP3-223	ENST00000492234	RFC1	P35251	1148 aa	Predicted RBP	13.67	□□□□□ -0.22
AGAP3-223	ENST00000492234	VCP	P55072	806 aa	Known RBP	13.67	□□□□□ -0.22
AGAP3-223	ENST00000492234	GSC	P56915	257 aa	Predicted RBP	13.67	□□□□□ -0.22
AGAP3-223	ENST00000492234	STARD6	P59095	220 aa		13.67	□□□□□ -0.22
AGAP3-223	ENST00000492234	GAD2	Q05329	585 aa		13.67	□□□□□ -0.22
AGAP3-223	ENST00000492234	RING1	Q06587	406 aa		13.67	□□□□□ -0.22
AGAP3-223	ENST00000492234	NNT	Q13423	1086 aa		13.67	□□□□□ -0.22
AGAP3-223	ENST00000492234	UBXN2B	Q14CS0	331 aa		13.67	□□□□□ -0.22
AGAP3-223	ENST00000492234	CDO1	Q16878	200 aa		13.67	□□□□□ -0.22
AGAP3-223	ENST00000492234	ARC	Q7LC44	396 aa		13.67	□□□□□ -0.22
AGAP3-223	ENST00000492234	ARHGAP30	Q7Z6I6	1101 aa	Predicted RBP	13.67	□□□□□ -0.22
AGAP3-223	ENST00000492234	RALGPS2	Q86X27	583 aa	Predicted RBP	13.67	□□□□□ -0.22
AGAP3-223	ENST00000492234	NAT16	Q8N8M0	369 aa		13.67	□□□□□ -0.22
AGAP3-223	ENST00000492234	ATP6V0D2	Q8N8Y2	350 aa		13.67	□□□□□ -0.22
AGAP3-223	ENST00000492234	BHMT	Q93088	406 aa		13.67	□□□□□ -0.22
AGAP3-223	ENST00000492234	MCEE	Q96PE7	176 aa		13.67	□□□□□ -0.22
AGAP3-223	ENST00000492234	NPY6R	Q99463	290 aa		13.67	□□□□□ -0.22
AGAP3-223	ENST00000492234	DDX50	Q9BQ39	737 aa	Known RBP	13.67	□□□□□ -0.22
AGAP3-223	ENST00000492234	BBS2	Q9BXC9	721 aa		13.67	□□□□□ -0.22
AGAP3-223	ENST00000492234	WDCP	Q9H6R7	721 aa		13.67	□□□□□ -0.22
AGAP3-223	ENST00000492234	GRPEL1	Q9HAV7	217 aa		13.67	□□□□□ -0.22
AGAP3-223	ENST00000492234	SLTM	Q9NWH9	1034 aa	Known RBP eCLIP	13.67	□□□□□ -0.22	7e-9	■■■□□ 15.8
AGAP3-223	ENST00000492234	MRPS17	Q9Y2R5	130 aa	Known RBP	13.67	□□□□□ -0.22
AGAP3-223	ENST00000492234	GOLGA6L7	A0A1B0GV03	622 aa		13.66	□□□□□ -0.22
AGAP3-223	ENST00000492234	KANSL1L	A0AUZ9	987 aa		13.66	□□□□□ -0.22
AGAP3-223	ENST00000492234	C2CD4B	A6NLJ0	364 aa		13.66	□□□□□ -0.22
AGAP3-223	ENST00000492234	FAM170B	A6NMN3	283 aa		13.66	□□□□□ -0.22
AGAP3-223	ENST00000492234	NEDD8-MDP1	E9PL57	170 aa		13.66	□□□□□ -0.22
AGAP3-223	ENST00000492234	ACSL4	O60488	711 aa		13.66	□□□□□ -0.22
AGAP3-223	ENST00000492234	IGLV3-25	P01717	112 aa		13.66	□□□□□ -0.22
AGAP3-223	ENST00000492234	IGLV3-27	P01718	113 aa		13.66	□□□□□ -0.22
AGAP3-223	ENST00000492234	CYBB	P04839	570 aa		13.66	□□□□□ -0.22
AGAP3-223	ENST00000492234	DES	P17661	470 aa		13.66	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms