RNA–Protein interactions for RNA: ENST00000491659.5

USP39-217, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 648 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-217ENST00000491659 DDI1Q8WTU0 396 aa15.74■□□□□ 0.11
USP39-217ENST00000491659 NOX5Q96PH1 765 aa15.74■□□□□ 0.11
USP39-217ENST00000491659 SLC4A5Q9BY07 1137 aa15.74■□□□□ 0.11
USP39-217ENST00000491659 TPSD1Q9BZJ3 242 aa15.74■□□□□ 0.11
USP39-217ENST00000491659 AJAP1Q9UKB5 411 aaPredicted RBP15.74■□□□□ 0.11
USP39-217ENST00000491659 STARD13Q9Y3M8 1113 aa15.74■□□□□ 0.11
USP39-217ENST00000491659 PLXND1Q9Y4D7 1925 aa15.73■□□□□ 0.11
USP39-217ENST00000491659 MYO18AQ92614 2054 aaKnown RBP15.73■□□□□ 0.11
USP39-217ENST00000491659 TCRBV21S2A2A0A5A6 115 aa15.73■□□□□ 0.11
USP39-217ENST00000491659 E5RJQ4 531 aa15.73■□□□□ 0.11
USP39-217ENST00000491659 CAPN9O14815 690 aa15.73■□□□□ 0.11
USP39-217ENST00000491659 ADAM23O75077 832 aa15.73■□□□□ 0.11
USP39-217ENST00000491659 HOXB2P14652 356 aa15.73■□□□□ 0.11
USP39-217ENST00000491659 NTSR1P30989 418 aa15.73■□□□□ 0.11
USP39-217ENST00000491659 LMNB2Q03252 620 aa15.73■□□□□ 0.11
USP39-217ENST00000491659 SPEM2Q0P670 501 aa15.73■□□□□ 0.11
USP39-217ENST00000491659 RAPGEF1Q13905 1077 aa15.73■□□□□ 0.11
USP39-217ENST00000491659 ELF2Q15723 593 aa15.73■□□□□ 0.11
USP39-217ENST00000491659 MPPE1Q53F39 396 aa15.73■□□□□ 0.11
USP39-217ENST00000491659 EGFLAMQ63HQ2 1017 aa15.73■□□□□ 0.11
USP39-217ENST00000491659 KBTBD6Q86V97 674 aa15.73■□□□□ 0.11
USP39-217ENST00000491659 C11orf74Q86VG3 221 aa15.73■□□□□ 0.11
USP39-217ENST00000491659 UNC45BQ8IWX7 931 aa15.73■□□□□ 0.11
USP39-217ENST00000491659 SCUBE3Q8IX30 993 aa15.73■□□□□ 0.11
USP39-217ENST00000491659 CHPFQ8IZ52 775 aa15.73■□□□□ 0.11
USP39-217ENST00000491659 LOXL4Q96JB6 756 aa15.73■□□□□ 0.11
USP39-217ENST00000491659 SERPINB11Q96P15 392 aa15.73■□□□□ 0.11
USP39-217ENST00000491659 ANO10Q9NW15 660 aa15.73■□□□□ 0.11
USP39-217ENST00000491659 TAB2Q9NYJ8 693 aa15.73■□□□□ 0.11
USP39-217ENST00000491659 PCDHGC3Q9UN70 934 aa15.73■□□□□ 0.11
USP39-217ENST00000491659 SLC27A6Q9Y2P4 619 aa15.73■□□□□ 0.11
USP39-217ENST00000491659 GPR179Q6PRD1 2367 aa15.72■□□□□ 0.11
USP39-217ENST00000491659 PRRT4C9JH25 899 aa15.72■□□□□ 0.11
USP39-217ENST00000491659 PAPSS1O43252 624 aaPredicted RBP15.72■□□□□ 0.11
USP39-217ENST00000491659 CISD3P0C7P0 127 aa15.72■□□□□ 0.11
USP39-217ENST00000491659 HNRNPLP14866 589 aaKnown RBP eCLIP15.72■□□□□ 0.11
USP39-217ENST00000491659 ID4P47928 161 aa15.72■□□□□ 0.11
USP39-217ENST00000491659 SLC11A2P49281 568 aa15.72■□□□□ 0.11
USP39-217ENST00000491659 TBX4P57082 545 aa15.72■□□□□ 0.11
USP39-217ENST00000491659 BPIFB4P59827 614 aa15.72■□□□□ 0.11
USP39-217ENST00000491659 RING1Q06587 406 aa15.72■□□□□ 0.11
USP39-217ENST00000491659 CCDC183Q5T5S1 534 aa15.72■□□□□ 0.11
USP39-217ENST00000491659 ADGRF1Q5T601 910 aa15.72■□□□□ 0.11
USP39-217ENST00000491659 ANKS1BQ7Z6G8 1248 aa15.72■□□□□ 0.11
USP39-217ENST00000491659 PASD1Q8IV76 773 aa15.72■□□□□ 0.11
USP39-217ENST00000491659 PGBD3Q8N328 593 aa15.72■□□□□ 0.11
USP39-217ENST00000491659 DQX1Q8TE96 717 aaKnown RBP15.72■□□□□ 0.11
USP39-217ENST00000491659 UCMAQ8WVF2 138 aa15.72■□□□□ 0.11
USP39-217ENST00000491659 ZC3H10Q96K80 434 aaKnown RBP15.72■□□□□ 0.11
USP39-217ENST00000491659 SPACA7Q96KW9 195 aa15.72■□□□□ 0.11
USP39-217ENST00000491659 LSM14BQ9BX40 385 aaKnown RBP15.72■□□□□ 0.11
USP39-217ENST00000491659 SLC2A11Q9BYW1 496 aa15.72■□□□□ 0.11
USP39-217ENST00000491659 CYTH4Q9UIA0 394 aa15.72■□□□□ 0.11
USP39-217ENST00000491659 STOML2Q9UJZ1 356 aa15.72■□□□□ 0.11
USP39-217ENST00000491659 FBXO10Q9UK96 956 aa15.72■□□□□ 0.11
USP39-217ENST00000491659 CEP83Q9Y592 693 aa15.72■□□□□ 0.11
USP39-217ENST00000491659 FHOD1Q9Y613 1164 aa15.72■□□□□ 0.11
USP39-217ENST00000491659 CFAP54Q96N23 3096 aa15.72■□□□□ 0.11
USP39-217ENST00000491659 ZBTB24O43167 697 aaPredicted RBP15.71■□□□□ 0.11
USP39-217ENST00000491659 TSPAN3O60637 253 aa15.71■□□□□ 0.11
USP39-217ENST00000491659 RHOBTB1O94844 696 aa15.71■□□□□ 0.11
USP39-217ENST00000491659 EPN2O95208 641 aa15.71■□□□□ 0.11
USP39-217ENST00000491659 IGLV3-27P01718 113 aa15.71■□□□□ 0.11
USP39-217ENST00000491659 PNMA6AP0CW24 399 aaPredicted RBP15.71■□□□□ 0.11
USP39-217ENST00000491659 GBP1P32455 592 aa15.71■□□□□ 0.11
USP39-217ENST00000491659 KRT9P35527 623 aa15.71■□□□□ 0.11
USP39-217ENST00000491659 WASP42768 502 aa15.71■□□□□ 0.11
USP39-217ENST00000491659 SNX16P57768 344 aa15.71■□□□□ 0.11
USP39-217ENST00000491659 KCNMA1Q12791 1236 aa15.71■□□□□ 0.11
USP39-217ENST00000491659 NNTQ13423 1086 aa15.71■□□□□ 0.11
USP39-217ENST00000491659 E2F5Q15329 346 aa15.71■□□□□ 0.11
USP39-217ENST00000491659 PLK5Q496M5 336 aa15.71■□□□□ 0.11
USP39-217ENST00000491659 KLHDC7AQ5VTJ3 777 aa15.71■□□□□ 0.11
USP39-217ENST00000491659 CDKAL1Q5VV42 579 aa15.71■□□□□ 0.11
USP39-217ENST00000491659 C11orf57Q6ZUT1 292 aaPredicted RBP15.71■□□□□ 0.11
USP39-217ENST00000491659 BEND5Q7L4P6 421 aa15.71■□□□□ 0.11
USP39-217ENST00000491659 TMEM110Q86TL2 294 aa15.71■□□□□ 0.11
USP39-217ENST00000491659 ANKRD20A12PQ8NF67 263 aa15.71■□□□□ 0.11
USP39-217ENST00000491659 IPO4Q8TEX9 1081 aaKnown RBP15.71■□□□□ 0.11
USP39-217ENST00000491659 HMGB4Q8WW32 186 aa15.71■□□□□ 0.11
USP39-217ENST00000491659 P2RY11Q96G91 374 aa15.71■□□□□ 0.11
USP39-217ENST00000491659 PPP1R13BQ96KQ4 1090 aa15.71■□□□□ 0.11
USP39-217ENST00000491659 LHX5Q9H2C1 402 aa15.71■□□□□ 0.11
USP39-217ENST00000491659 POPDC2Q9HBU9 364 aa15.71■□□□□ 0.11
USP39-217ENST00000491659 PARD6AQ9NPB6 346 aa15.71■□□□□ 0.11
USP39-217ENST00000491659 SEMA4GQ9NTN9 838 aa15.71■□□□□ 0.11
USP39-217ENST00000491659 NAALADL1Q9UQQ1 740 aa15.71■□□□□ 0.11
USP39-217ENST00000491659 TLR6Q9Y2C9 796 aa15.71■□□□□ 0.11
USP39-217ENST00000491659 THADAQ6YHU6 1953 aa15.7■□□□□ 0.1
USP39-217ENST00000491659 TYW5A2RUC4 315 aaKnown RBP15.7■□□□□ 0.1
USP39-217ENST00000491659 PRR5-ARHGAP8B1AHC4 643 aa15.7■□□□□ 0.1
USP39-217ENST00000491659 FOXN3O00409 490 aaPredicted RBP15.7■□□□□ 0.1
USP39-217ENST00000491659 DCLK1O15075 740 aa15.7■□□□□ 0.1
USP39-217ENST00000491659 FOXD2O60548 495 aaPredicted RBP15.7■□□□□ 0.1
USP39-217ENST00000491659 FYNP06241 537 aa15.7■□□□□ 0.1
USP39-217ENST00000491659 CLCN1P35523 988 aa15.7■□□□□ 0.1
USP39-217ENST00000491659 YWHAZP63104 245 aaKnown RBP15.7■□□□□ 0.1
USP39-217ENST00000491659 ARHGAP8P85298 464 aa15.7■□□□□ 0.1
USP39-217ENST00000491659 MYL5Q02045 173 aa15.7■□□□□ 0.1
USP39-217ENST00000491659 BYSLQ13895 437 aaKnown RBP15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms