RNA–Protein interactions for RNA: ENST00000491552.1

MSH5-SAPCD1-206, Transcript of MSH5-SAPCD1 readthrough (NMD candidate), humanhuman

TSL 3

Gene MSH5-SAPCD1, Length 706 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-SAPCD1-206ENST00000491552 NEDD8-MDP1E9PL57 170 aa16.95■□□□□ 0.3
MSH5-SAPCD1-206ENST00000491552 GOLGA8SH3BPF8 625 aa16.95■□□□□ 0.3
MSH5-SAPCD1-206ENST00000491552 TRUB2O95900 331 aaKnown RBP16.95■□□□□ 0.3
MSH5-SAPCD1-206ENST00000491552 IGLV3-25P01717 112 aa16.95■□□□□ 0.3
MSH5-SAPCD1-206ENST00000491552 TNFAIP3P21580 790 aa16.95■□□□□ 0.3
MSH5-SAPCD1-206ENST00000491552 PRKCIP41743 596 aa16.95■□□□□ 0.3
MSH5-SAPCD1-206ENST00000491552 PITX1P78337 314 aaPredicted RBP16.95■□□□□ 0.3
MSH5-SAPCD1-206ENST00000491552 C12orf40Q86WS4 652 aa16.95■□□□□ 0.3
MSH5-SAPCD1-206ENST00000491552 CPXM2Q8N436 756 aa16.95■□□□□ 0.3
MSH5-SAPCD1-206ENST00000491552 FCRL2Q96LA5 508 aaPredicted RBP16.95■□□□□ 0.3
MSH5-SAPCD1-206ENST00000491552 SYT11Q9BT88 431 aa16.95■□□□□ 0.3
MSH5-SAPCD1-206ENST00000491552 IER2Q9BTL4 223 aa16.95■□□□□ 0.3
MSH5-SAPCD1-206ENST00000491552 BBS2Q9BXC9 721 aa16.95■□□□□ 0.3
MSH5-SAPCD1-206ENST00000491552 NUCKS1Q9H1E3 243 aaKnown RBP16.95■□□□□ 0.3
MSH5-SAPCD1-206ENST00000491552 CHRDQ9H2X0 955 aa16.95■□□□□ 0.3
MSH5-SAPCD1-206ENST00000491552 HAUS4Q9H6D7 363 aa16.95■□□□□ 0.3
MSH5-SAPCD1-206ENST00000491552 FAM204AQ9H8W3 233 aa16.95■□□□□ 0.3
MSH5-SAPCD1-206ENST00000491552 FBRSL1Q9HCM7 1045 aaKnown RBP16.95■□□□□ 0.3
MSH5-SAPCD1-206ENST00000491552 WDR35Q9P2L0 1181 aa16.95■□□□□ 0.3
MSH5-SAPCD1-206ENST00000491552 CAPN11Q9UMQ6 739 aa16.95■□□□□ 0.3
MSH5-SAPCD1-206ENST00000491552 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.95■□□□□ 0.31e-7■□□□□ 10.5
MSH5-SAPCD1-206ENST00000491552 ZNF318Q5VUA4 2279 aa16.94■□□□□ 0.3
MSH5-SAPCD1-206ENST00000491552 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.94■□□□□ 0.3
MSH5-SAPCD1-206ENST00000491552 EGFP01133 1207 aa16.94■□□□□ 0.3
MSH5-SAPCD1-206ENST00000491552 GYPCP04921 128 aa16.94■□□□□ 0.3
MSH5-SAPCD1-206ENST00000491552 TYRP14679 529 aa16.94■□□□□ 0.3
MSH5-SAPCD1-206ENST00000491552 GBP1P32455 592 aa16.94■□□□□ 0.3
MSH5-SAPCD1-206ENST00000491552 NOS2P35228 1153 aa16.94■□□□□ 0.3
MSH5-SAPCD1-206ENST00000491552 MATKP42679 507 aa16.94■□□□□ 0.3
MSH5-SAPCD1-206ENST00000491552 SLC11A2P49281 568 aa16.94■□□□□ 0.3
MSH5-SAPCD1-206ENST00000491552 RNASE9P60153 205 aaKnown RBP16.94■□□□□ 0.3
MSH5-SAPCD1-206ENST00000491552 ZBED6P86452 979 aa16.94■□□□□ 0.3
MSH5-SAPCD1-206ENST00000491552 KLHL30Q0D2K2 578 aa16.94■□□□□ 0.3
MSH5-SAPCD1-206ENST00000491552 PHF13Q86YI8 300 aaPredicted RBP16.94■□□□□ 0.3
MSH5-SAPCD1-206ENST00000491552 ETFBKMTQ8IXQ9 262 aa16.94■□□□□ 0.3
MSH5-SAPCD1-206ENST00000491552 SYNPOQ8N3V7 929 aa16.94■□□□□ 0.3
MSH5-SAPCD1-206ENST00000491552 PRSS33Q8NF86 280 aa16.94■□□□□ 0.3
MSH5-SAPCD1-206ENST00000491552 OLIG1Q8TAK6 271 aa16.94■□□□□ 0.3
MSH5-SAPCD1-206ENST00000491552 CPLX3Q8WVH0 158 aa16.94■□□□□ 0.3
MSH5-SAPCD1-206ENST00000491552 SLC39A13Q96H72 371 aa16.94■□□□□ 0.3
MSH5-SAPCD1-206ENST00000491552 XPO6Q96QU8 1125 aaKnown RBP16.94■□□□□ 0.3
MSH5-SAPCD1-206ENST00000491552 PNKPQ96T60 521 aa16.94■□□□□ 0.3
MSH5-SAPCD1-206ENST00000491552 SPATA6Q9NWH7 488 aaPredicted RBP16.94■□□□□ 0.3
MSH5-SAPCD1-206ENST00000491552 DDIT4Q9NX09 232 aa16.94■□□□□ 0.3
MSH5-SAPCD1-206ENST00000491552 RRN3Q9NYV6 651 aa16.94■□□□□ 0.3
MSH5-SAPCD1-206ENST00000491552 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.94■□□□□ 0.3
MSH5-SAPCD1-206ENST00000491552 ADAM22Q9P0K1 906 aa16.94■□□□□ 0.3
MSH5-SAPCD1-206ENST00000491552 RAPGEFL1Q9UHV5 662 aa16.94■□□□□ 0.3
MSH5-SAPCD1-206ENST00000491552 STOML2Q9UJZ1 356 aa16.94■□□□□ 0.3
MSH5-SAPCD1-206ENST00000491552 KIAA1549LQ6ZVL6 1849 aa16.93■□□□□ 0.3
MSH5-SAPCD1-206ENST00000491552 CACNG3O60359 315 aa16.93■□□□□ 0.3
MSH5-SAPCD1-206ENST00000491552 APOEP02649 317 aa16.93■□□□□ 0.3
MSH5-SAPCD1-206ENST00000491552 CYBBP04839 570 aa16.93■□□□□ 0.3
MSH5-SAPCD1-206ENST00000491552 CALB1P05937 261 aa16.93■□□□□ 0.3
MSH5-SAPCD1-206ENST00000491552 SLC6A11P48066 632 aa16.93■□□□□ 0.3
MSH5-SAPCD1-206ENST00000491552 GSCP56915 257 aaPredicted RBP16.93■□□□□ 0.3
MSH5-SAPCD1-206ENST00000491552 KDSRQ06136 332 aa16.93■□□□□ 0.3
MSH5-SAPCD1-206ENST00000491552 PTP4A2Q12974 167 aa16.93■□□□□ 0.3
MSH5-SAPCD1-206ENST00000491552 TRIM14Q14142 442 aa16.93■□□□□ 0.3
MSH5-SAPCD1-206ENST00000491552 FBXO43Q4G163 708 aa16.93■□□□□ 0.3
MSH5-SAPCD1-206ENST00000491552 PREPLQ4J6C6 727 aaPredicted RBP16.93■□□□□ 0.3
MSH5-SAPCD1-206ENST00000491552 ADGRF1Q5T601 910 aa16.93■□□□□ 0.3
MSH5-SAPCD1-206ENST00000491552 SPECC1LQ69YQ0 1117 aa16.93■□□□□ 0.3
MSH5-SAPCD1-206ENST00000491552 Q6ZS52 159 aa16.93■□□□□ 0.3
MSH5-SAPCD1-206ENST00000491552 MON1BQ7L1V2 547 aa16.93■□□□□ 0.3
MSH5-SAPCD1-206ENST00000491552 ZNF571Q7Z3V5 609 aaPredicted RBP16.93■□□□□ 0.3
MSH5-SAPCD1-206ENST00000491552 NAT16Q8N8M0 369 aa16.93■□□□□ 0.3
MSH5-SAPCD1-206ENST00000491552 SYN2Q92777 582 aaPredicted RBP16.93■□□□□ 0.3
MSH5-SAPCD1-206ENST00000491552 BHMTQ93088 406 aa16.93■□□□□ 0.3
MSH5-SAPCD1-206ENST00000491552 AZIN2Q96A70 460 aa16.93■□□□□ 0.3
MSH5-SAPCD1-206ENST00000491552 METTL5Q9NRN9 209 aaKnown RBP16.93■□□□□ 0.3
MSH5-SAPCD1-206ENST00000491552 STAP1Q9ULZ2 295 aa16.93■□□□□ 0.3
MSH5-SAPCD1-206ENST00000491552 LUC7L2Q9Y383 392 aaKnown RBP16.93■□□□□ 0.3
MSH5-SAPCD1-206ENST00000491552 ZDBF2Q9HCK1 2354 aa16.92■□□□□ 0.3
MSH5-SAPCD1-206ENST00000491552 SYNJ2BP-COX16A0A087WUM0 186 aa16.92■□□□□ 0.3
MSH5-SAPCD1-206ENST00000491552 ACSL4O60488 711 aa16.92■□□□□ 0.3
MSH5-SAPCD1-206ENST00000491552 TULP3O75386 442 aa16.92■□□□□ 0.3
MSH5-SAPCD1-206ENST00000491552 MOCS2O96007 188 aaPredicted RBP16.92■□□□□ 0.3
MSH5-SAPCD1-206ENST00000491552 PENKP01210 267 aaPredicted RBP16.92■□□□□ 0.3
MSH5-SAPCD1-206ENST00000491552 APODP05090 189 aa16.92■□□□□ 0.3
MSH5-SAPCD1-206ENST00000491552 SKILP12757 684 aa16.92■□□□□ 0.3
MSH5-SAPCD1-206ENST00000491552 CASP14P31944 242 aa16.92■□□□□ 0.3
MSH5-SAPCD1-206ENST00000491552 SULT1E1P49888 294 aa16.92■□□□□ 0.3
MSH5-SAPCD1-206ENST00000491552 C1QBPQ07021 282 aaKnown RBP16.92■□□□□ 0.3
MSH5-SAPCD1-206ENST00000491552 MTAPQ13126 283 aa16.92■□□□□ 0.3
MSH5-SAPCD1-206ENST00000491552 EIF4EBP2Q13542 120 aaPredicted RBP16.92■□□□□ 0.3
MSH5-SAPCD1-206ENST00000491552 TDRD12Q587J7 1177 aaKnown RBP16.92■□□□□ 0.3
MSH5-SAPCD1-206ENST00000491552 ZC3H12AQ5D1E8 599 aaKnown RBP16.92■□□□□ 0.3
MSH5-SAPCD1-206ENST00000491552 FYB2Q5VWT5 728 aa16.92■□□□□ 0.3
MSH5-SAPCD1-206ENST00000491552 ACAD10Q6JQN1 1059 aa16.92■□□□□ 0.3
MSH5-SAPCD1-206ENST00000491552 PPP1R2P3Q6NXS1 205 aa16.92■□□□□ 0.3
MSH5-SAPCD1-206ENST00000491552 SARM1Q6SZW1 724 aa16.92■□□□□ 0.3
MSH5-SAPCD1-206ENST00000491552 C1orf210Q8IVY1 113 aa16.92■□□□□ 0.3
MSH5-SAPCD1-206ENST00000491552 VSTM4Q8IW00 320 aa16.92■□□□□ 0.3
MSH5-SAPCD1-206ENST00000491552 PHTF2Q8N3S3 785 aa16.92■□□□□ 0.3
MSH5-SAPCD1-206ENST00000491552 EZH1Q92800 747 aaPredicted RBP16.92■□□□□ 0.3
MSH5-SAPCD1-206ENST00000491552 NPY6RQ99463 290 aa16.92■□□□□ 0.3
MSH5-SAPCD1-206ENST00000491552 RBSNQ9H1K0 784 aa16.92■□□□□ 0.3
MSH5-SAPCD1-206ENST00000491552 ARHGEF4Q9NR80 690 aa16.92■□□□□ 0.3
MSH5-SAPCD1-206ENST00000491552 DNAJC17Q9NVM6 304 aaKnown RBP16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms