RNA–Protein interactions for RNA: ENST00000490993.5

NPHP3-208, Transcript of nephrocystin 3, humanhuman

TSL 5

Gene NPHP3, Length 5,197 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-208ENST00000490993 SERPINI1Q99574 410 aa7.58□□□□□ -1.2
NPHP3-208ENST00000490993 ULBP1Q9BZM6 244 aa7.58□□□□□ -1.2
NPHP3-208ENST00000490993 ACSS3Q9H6R3 686 aa7.58□□□□□ -1.2
NPHP3-208ENST00000490993 NPHS2Q9NP85 383 aa7.58□□□□□ -1.2
NPHP3-208ENST00000490993 ABCC13Q9NSE7 274 aa7.58□□□□□ -1.2
NPHP3-208ENST00000490993 C20orf96Q9NUD7 363 aaPredicted RBP7.58□□□□□ -1.2
NPHP3-208ENST00000490993 TRIM66O15016 1216 aa7.58□□□□□ -1.2
NPHP3-208ENST00000490993 GMNNO75496 209 aa7.58□□□□□ -1.2
NPHP3-208ENST00000490993 SERPINB8P50452 374 aa7.58□□□□□ -1.2
NPHP3-208ENST00000490993 STX1BP61266 288 aa7.58□□□□□ -1.2
NPHP3-208ENST00000490993 RPS6KA2Q15349 733 aa7.58□□□□□ -1.2
NPHP3-208ENST00000490993 NBPF20Q3BBV1 942 aa7.58□□□□□ -1.2
NPHP3-208ENST00000490993 CXCL17Q6UXB2 119 aa7.58□□□□□ -1.2
NPHP3-208ENST00000490993 ZNF669Q96BR6 464 aaPredicted RBP7.58□□□□□ -1.2
NPHP3-208ENST00000490993 SERPINB11Q96P15 392 aa7.58□□□□□ -1.2
NPHP3-208ENST00000490993 EIF2AQ9BY44 585 aaKnown RBP7.58□□□□□ -1.2
NPHP3-208ENST00000490993 PTPRHQ9HD43 1115 aa7.58□□□□□ -1.2
NPHP3-208ENST00000490993 STARD7Q9NQZ5 370 aa7.58□□□□□ -1.2
NPHP3-208ENST00000490993 ABI2Q9NYB9 513 aaPredicted RBP7.58□□□□□ -1.2
NPHP3-208ENST00000490993 NOP53Q9NZM5 478 aaKnown RBP7.58□□□□□ -1.2
NPHP3-208ENST00000490993 PCDHB5Q9Y5E4 795 aa7.58□□□□□ -1.2
NPHP3-208ENST00000490993 RPS6KL1Q9Y6S9 549 aa7.58□□□□□ -1.2
NPHP3-208ENST00000490993 PTPRJQ12913 1337 aa7.57□□□□□ -1.2
NPHP3-208ENST00000490993 FGF10O15520 208 aaPredicted RBP7.57□□□□□ -1.2
NPHP3-208ENST00000490993 TREHO43280 583 aa7.57□□□□□ -1.2
NPHP3-208ENST00000490993 SNAI1O95863 264 aaPredicted RBP7.57□□□□□ -1.2
NPHP3-208ENST00000490993 POMCP01189 267 aa7.57□□□□□ -1.2
NPHP3-208ENST00000490993 ATP5BP06576 529 aaKnown RBP7.57□□□□□ -1.2
NPHP3-208ENST00000490993 SSTR1P30872 391 aa7.57□□□□□ -1.2
NPHP3-208ENST00000490993 PRAMEP78395 509 aa7.57□□□□□ -1.2
NPHP3-208ENST00000490993 SCARA3Q6AZY7 606 aa7.57□□□□□ -1.2
NPHP3-208ENST00000490993 DCLRE1AQ6PJP8 1040 aa7.57□□□□□ -1.2
NPHP3-208ENST00000490993 EXOC3L1Q86VI1 746 aa7.57□□□□□ -1.2
NPHP3-208ENST00000490993 TDRPQ86YL5 185 aa7.57□□□□□ -1.2
NPHP3-208ENST00000490993 FTHL17Q9BXU8 183 aa7.57□□□□□ -1.2
NPHP3-208ENST00000490993 FETUBQ9UGM5 382 aa7.57□□□□□ -1.2
NPHP3-208ENST00000490993 ANGPTL2Q9UKU9 493 aa7.57□□□□□ -1.2
NPHP3-208ENST00000490993 CCDC195A0A1B0GUA6 201 aa7.57□□□□□ -1.2
NPHP3-208ENST00000490993 RNF103O00237 685 aa7.57□□□□□ -1.2
NPHP3-208ENST00000490993 IGF2BP3O00425 579 aaKnown RBP eCLIP7.57□□□□□ -1.2
NPHP3-208ENST00000490993 F2P00734 622 aa7.57□□□□□ -1.2
NPHP3-208ENST00000490993 SCNN1GP51170 649 aa7.57□□□□□ -1.2
NPHP3-208ENST00000490993 PKN2Q16513 984 aaKnown RBP7.57□□□□□ -1.2
NPHP3-208ENST00000490993 CTXN3Q4LDR2 81 aa7.57□□□□□ -1.2
NPHP3-208ENST00000490993 ACBD5Q5T8D3 534 aaPredicted RBP7.57□□□□□ -1.2
NPHP3-208ENST00000490993 GRTP1Q5TC63 336 aa7.57□□□□□ -1.2
NPHP3-208ENST00000490993 ELMOD1Q8N336 334 aa7.57□□□□□ -1.2
NPHP3-208ENST00000490993 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.57□□□□□ -1.2
NPHP3-208ENST00000490993 IRGQQ8WZA9 623 aa7.57□□□□□ -1.2
NPHP3-208ENST00000490993 PTPRN2Q92932 1015 aa7.57□□□□□ -1.2
NPHP3-208ENST00000490993 ADAM2Q99965 735 aa7.57□□□□□ -1.2
NPHP3-208ENST00000490993 C16orf70Q9BSU1 422 aa7.57□□□□□ -1.2
NPHP3-208ENST00000490993 RXFP1Q9HBX9 757 aa7.57□□□□□ -1.2
NPHP3-208ENST00000490993 SAE1Q9UBE0 346 aaPredicted RBP7.57□□□□□ -1.2
NPHP3-208ENST00000490993 RTN3O95197 1032 aaPredicted RBP7.57□□□□□ -1.2
NPHP3-208ENST00000490993 NCF2P19878 526 aaPredicted RBP7.57□□□□□ -1.2
NPHP3-208ENST00000490993 YY1P25490 414 aa7.57□□□□□ -1.2
NPHP3-208ENST00000490993 MGAT5BQ3V5L5 792 aa7.57□□□□□ -1.2
NPHP3-208ENST00000490993 ANKRD20A2Q5SQ80 823 aa7.57□□□□□ -1.2
NPHP3-208ENST00000490993 RNASEH2BQ5TBB1 312 aaKnown RBP7.57□□□□□ -1.2
NPHP3-208ENST00000490993 MROH9Q5TGP6 573 aa7.57□□□□□ -1.2
NPHP3-208ENST00000490993 ANKRD20A1Q5TYW2 823 aa7.57□□□□□ -1.2
NPHP3-208ENST00000490993 NPNTQ6UXI9 565 aa7.57□□□□□ -1.2
NPHP3-208ENST00000490993 LRRC49Q8IUZ0 686 aa7.57□□□□□ -1.2
NPHP3-208ENST00000490993 RAB3IL1Q8TBN0 382 aa7.57□□□□□ -1.2
NPHP3-208ENST00000490993 FAM111AQ96PZ2 611 aa7.57□□□□□ -1.2
NPHP3-208ENST00000490993 SIKE1Q9BRV8 207 aa7.57□□□□□ -1.2
NPHP3-208ENST00000490993 SLC4A5Q9BY07 1137 aa7.57□□□□□ -1.2
NPHP3-208ENST00000490993 MRPL9Q9BYD2 267 aaKnown RBP7.57□□□□□ -1.2
NPHP3-208ENST00000490993 EML4Q9HC35 981 aaKnown RBP7.57□□□□□ -1.2
NPHP3-208ENST00000490993 NDE1Q9NXR1 346 aa7.57□□□□□ -1.2
NPHP3-208ENST00000490993 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.57□□□□□ -1.2
NPHP3-208ENST00000490993 KCNE1P15382 129 aa7.57□□□□□ -1.2
NPHP3-208ENST00000490993 TPSB2P20231 275 aa7.57□□□□□ -1.2
NPHP3-208ENST00000490993 NFKBIAP25963 317 aa7.57□□□□□ -1.2
NPHP3-208ENST00000490993 SCTRP47872 440 aa7.57□□□□□ -1.2
NPHP3-208ENST00000490993 EPHB1P54762 984 aa7.57□□□□□ -1.2
NPHP3-208ENST00000490993 TPSAB1Q15661 275 aa7.57□□□□□ -1.2
NPHP3-208ENST00000490993 DPY19L2P1Q6NXN4 242 aa7.57□□□□□ -1.2
NPHP3-208ENST00000490993 PMF1Q6P1K2 205 aa7.57□□□□□ -1.2
NPHP3-208ENST00000490993 CRYBG2Q8N1P7 616 aa7.57□□□□□ -1.2
NPHP3-208ENST00000490993 MCUQ8NE86 351 aa7.57□□□□□ -1.2
NPHP3-208ENST00000490993 ERP27Q96DN0 273 aa7.57□□□□□ -1.2
NPHP3-208ENST00000490993 KLF6Q99612 283 aaPredicted RBP7.57□□□□□ -1.2
NPHP3-208ENST00000490993 SEPT5Q99719 369 aaPredicted RBP7.57□□□□□ -1.2
NPHP3-208ENST00000490993 XYLT2Q9H1B5 865 aa7.57□□□□□ -1.2
NPHP3-208ENST00000490993 SSU72Q9NP77 194 aaKnown RBP7.57□□□□□ -1.2
NPHP3-208ENST00000490993 TBC1D13Q9NVG8 400 aa7.57□□□□□ -1.2
NPHP3-208ENST00000490993 PCDHA11Q9Y5I1 949 aa7.57□□□□□ -1.2
NPHP3-208ENST00000490993 TIMM13Q9Y5L4 95 aaPredicted RBP7.57□□□□□ -1.2
NPHP3-208ENST00000490993 F8W8V4 182 aa7.56□□□□□ -1.2
NPHP3-208ENST00000490993 KLHL2O95198 593 aa7.56□□□□□ -1.2
NPHP3-208ENST00000490993 CDH17Q12864 832 aa7.56□□□□□ -1.2
NPHP3-208ENST00000490993 MMRN1Q13201 1228 aa7.56□□□□□ -1.2
NPHP3-208ENST00000490993 ZC3H12AQ5D1E8 599 aaKnown RBP7.56□□□□□ -1.2
NPHP3-208ENST00000490993 C10orf120Q5SQS8 335 aa7.56□□□□□ -1.2
NPHP3-208ENST00000490993 TMEM110Q86TL2 294 aa7.56□□□□□ -1.2
NPHP3-208ENST00000490993 FAM35AQ86V20 835 aa7.56□□□□□ -1.2
NPHP3-208ENST00000490993 UNC45BQ8IWX7 931 aa7.56□□□□□ -1.2
NPHP3-208ENST00000490993 TMEM192Q8IY95 271 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms