RNA–Protein interactions for RNA: ENST00000490910.5

CRNKL1-204, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best)

Gene CRNKL1, Length 4,183 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-204ENST00000490910 DPY19L2Q6NUT2 758 aa11.6□□□□□ -0.55
CRNKL1-204ENST00000490910 TRAF7Q6Q0C0 670 aa11.6□□□□□ -0.55
CRNKL1-204ENST00000490910 KBTBD2Q8IY47 623 aa11.6□□□□□ -0.55
CRNKL1-204ENST00000490910 PCDH20Q8N6Y1 951 aaKnown RBP11.6□□□□□ -0.55
CRNKL1-204ENST00000490910 PSPC1Q8WXF1 523 aaKnown RBP11.6□□□□□ -0.55
CRNKL1-204ENST00000490910 SERAC1Q96JX3 654 aa11.6□□□□□ -0.55
CRNKL1-204ENST00000490910 RAD21L1Q9H4I0 556 aa11.6□□□□□ -0.55
CRNKL1-204ENST00000490910 TRPC7Q9HCX4 862 aa11.6□□□□□ -0.55
CRNKL1-204ENST00000490910 SLC39A10Q9ULF5 831 aa11.6□□□□□ -0.55
CRNKL1-204ENST00000490910 POLIQ9UNA4 740 aa11.6□□□□□ -0.55
CRNKL1-204ENST00000490910 CAB39Q9Y376 341 aaPredicted RBP11.6□□□□□ -0.55
CRNKL1-204ENST00000490910 SDR42E2A6NKP2 422 aa11.6□□□□□ -0.55
CRNKL1-204ENST00000490910 APOC4-APOC2K7ER74 178 aa11.6□□□□□ -0.55
CRNKL1-204ENST00000490910 NDUFB10O96000 172 aa11.6□□□□□ -0.55
CRNKL1-204ENST00000490910 APOC2P02655 101 aa11.6□□□□□ -0.55
CRNKL1-204ENST00000490910 PSAPP07602 524 aa11.6□□□□□ -0.55
CRNKL1-204ENST00000490910 SFNP31947 248 aa11.6□□□□□ -0.55
CRNKL1-204ENST00000490910 CACNB3P54284 484 aa11.6□□□□□ -0.55
CRNKL1-204ENST00000490910 PTP4A2Q12974 167 aa11.6□□□□□ -0.55
CRNKL1-204ENST00000490910 ITGA7Q13683 1181 aa11.6□□□□□ -0.55
CRNKL1-204ENST00000490910 DPYSQ14117 519 aa11.6□□□□□ -0.55
CRNKL1-204ENST00000490910 AGKQ53H12 422 aa11.6□□□□□ -0.55
CRNKL1-204ENST00000490910 PLA2G4FQ68DD2 849 aa11.6□□□□□ -0.55
CRNKL1-204ENST00000490910 PTAR1Q7Z6K3 402 aaPredicted RBP11.6□□□□□ -0.55
CRNKL1-204ENST00000490910 RNF135Q8IUD6 432 aa11.6□□□□□ -0.55
CRNKL1-204ENST00000490910 RP9Q8TA86 221 aaKnown RBP11.6□□□□□ -0.55
CRNKL1-204ENST00000490910 LRRC39Q96DD0 335 aa11.6□□□□□ -0.55
CRNKL1-204ENST00000490910 EBF4Q9BQW3 602 aa11.6□□□□□ -0.55
CRNKL1-204ENST00000490910 NAT9Q9BTE0 207 aa11.6□□□□□ -0.55
CRNKL1-204ENST00000490910 C9orf16Q9BUW7 83 aa11.6□□□□□ -0.55
CRNKL1-204ENST00000490910 CXorf21Q9HAI6 301 aa11.6□□□□□ -0.55
CRNKL1-204ENST00000490910 STK39Q9UEW8 545 aa11.6□□□□□ -0.55
CRNKL1-204ENST00000490910 V9GYQ6 96 aa11.6□□□□□ -0.55
CRNKL1-204ENST00000490910 ZNF335Q9H4Z2 1342 aaPredicted RBP11.6□□□□□ -0.55
CRNKL1-204ENST00000490910 PRKAA1Q13131 559 aa11.6□□□□□ -0.55
CRNKL1-204ENST00000490910 DGKDQ16760 1214 aa11.6□□□□□ -0.55
CRNKL1-204ENST00000490910 DUOXA2Q1HG44 320 aa11.6□□□□□ -0.55
CRNKL1-204ENST00000490910 AASDHQ4L235 1098 aaPredicted RBP11.6□□□□□ -0.55
CRNKL1-204ENST00000490910 TMEM110Q86TL2 294 aa11.6□□□□□ -0.55
CRNKL1-204ENST00000490910 TREML1Q86YW5 311 aa11.6□□□□□ -0.55
CRNKL1-204ENST00000490910 LARGE2Q8N3Y3 721 aa11.6□□□□□ -0.55
CRNKL1-204ENST00000490910 RYBPQ8N488 228 aaPredicted RBP11.6□□□□□ -0.55
CRNKL1-204ENST00000490910 ZFP28Q8NHY6 868 aa11.6□□□□□ -0.55
CRNKL1-204ENST00000490910 ACTRT2Q8TDY3 377 aa11.6□□□□□ -0.55
CRNKL1-204ENST00000490910 CPT1BQ92523 772 aa11.6□□□□□ -0.55
CRNKL1-204ENST00000490910 ZFYVE19Q96K21 471 aa11.6□□□□□ -0.55
CRNKL1-204ENST00000490910 AGAP3Q96P47 875 aa11.6□□□□□ -0.55
CRNKL1-204ENST00000490910 POLR3FQ9H1D9 316 aaPredicted RBP11.6□□□□□ -0.55
CRNKL1-204ENST00000490910 RNPEPQ9H4A4 650 aa11.6□□□□□ -0.55
CRNKL1-204ENST00000490910 DHX33Q9H6R0 707 aaKnown RBP11.6□□□□□ -0.55
CRNKL1-204ENST00000490910 SYBUQ9NX95 663 aa11.6□□□□□ -0.55
CRNKL1-204ENST00000490910 DAGLAQ9Y4D2 1042 aa11.6□□□□□ -0.55
CRNKL1-204ENST00000490910 RGPD1P0DJD0 1748 aa11.6□□□□□ -0.55
CRNKL1-204ENST00000490910 LRRC37A3O60309 1634 aa11.6□□□□□ -0.55
CRNKL1-204ENST00000490910 TRIM38O00635 465 aa11.6□□□□□ -0.55
CRNKL1-204ENST00000490910 GSNP06396 782 aa11.6□□□□□ -0.55
CRNKL1-204ENST00000490910 ALOX5P09917 674 aa11.6□□□□□ -0.55
CRNKL1-204ENST00000490910 CDK9P50750 372 aaKnown RBP11.6□□□□□ -0.55
CRNKL1-204ENST00000490910 AP3M2P53677 418 aa11.6□□□□□ -0.55
CRNKL1-204ENST00000490910 GABPAQ06546 454 aa11.6□□□□□ -0.55
CRNKL1-204ENST00000490910 NFIL3Q16649 462 aa11.6□□□□□ -0.55
CRNKL1-204ENST00000490910 ANO4Q32M45 955 aa11.6□□□□□ -0.55
CRNKL1-204ENST00000490910 FNBP1LQ5T0N5 605 aa11.6□□□□□ -0.55
CRNKL1-204ENST00000490910 ZNF606Q8WXB4 792 aa11.6□□□□□ -0.55
CRNKL1-204ENST00000490910 COQ7Q99807 217 aa11.6□□□□□ -0.55
CRNKL1-204ENST00000490910 DDX43Q9NXZ2 648 aaKnown RBP11.6□□□□□ -0.55
CRNKL1-204ENST00000490910 SH3PXD2BA1X283 911 aa11.59□□□□□ -0.55
CRNKL1-204ENST00000490910 AP3B1O00203 1094 aa11.59□□□□□ -0.55
CRNKL1-204ENST00000490910 EXTL3O43909 919 aa11.59□□□□□ -0.55
CRNKL1-204ENST00000490910 EIF4BP23588 611 aaKnown RBP11.59□□□□□ -0.55
CRNKL1-204ENST00000490910 PIK3R1P27986 724 aa11.59□□□□□ -0.55
CRNKL1-204ENST00000490910 GABRB2P47870 512 aa11.59□□□□□ -0.55
CRNKL1-204ENST00000490910 PEX6Q13608 980 aa11.59□□□□□ -0.55
CRNKL1-204ENST00000490910 MYLK3Q32MK0 819 aa11.59□□□□□ -0.55
CRNKL1-204ENST00000490910 C6orf183Q5T699 404 aa11.59□□□□□ -0.55
CRNKL1-204ENST00000490910 RWDD4Q6NW29 188 aaKnown RBP11.59□□□□□ -0.55
CRNKL1-204ENST00000490910 TAS2R42Q7RTR8 314 aa11.59□□□□□ -0.55
CRNKL1-204ENST00000490910 FAM160B2Q86V87 743 aa11.59□□□□□ -0.55
CRNKL1-204ENST00000490910 RELL1Q8IUW5 271 aa11.59□□□□□ -0.55
CRNKL1-204ENST00000490910 EMC1Q8N766 993 aa11.59□□□□□ -0.55
CRNKL1-204ENST00000490910 C7orf31Q8N865 590 aa11.59□□□□□ -0.55
CRNKL1-204ENST00000490910 NKD2Q969F2 451 aaPredicted RBP11.59□□□□□ -0.55
CRNKL1-204ENST00000490910 WNK4Q96J92 1243 aa11.59□□□□□ -0.55
CRNKL1-204ENST00000490910 SH3GL1Q99961 368 aa11.59□□□□□ -0.55
CRNKL1-204ENST00000490910 FAIMQ9NVQ4 179 aa11.59□□□□□ -0.55
CRNKL1-204ENST00000490910 NYAP2Q9P242 653 aa11.59□□□□□ -0.55
CRNKL1-204ENST00000490910 GABBR1Q9UBS5 961 aa11.59□□□□□ -0.55
CRNKL1-204ENST00000490910 TELO2Q9Y4R8 837 aa11.59□□□□□ -0.55
CRNKL1-204ENST00000490910 FAM155BO75949 473 aa11.59□□□□□ -0.55
CRNKL1-204ENST00000490910 CHEK2O96017 543 aa11.59□□□□□ -0.55
CRNKL1-204ENST00000490910 MAPTP10636 758 aaKnown RBP11.59□□□□□ -0.55
CRNKL1-204ENST00000490910 FCGR1AP12314 374 aa11.59□□□□□ -0.55
CRNKL1-204ENST00000490910 SLC27A3Q5K4L6 730 aa11.59□□□□□ -0.55
CRNKL1-204ENST00000490910 ABRAXAS1Q6UWZ7 409 aa11.59□□□□□ -0.55
CRNKL1-204ENST00000490910 OTOP1Q7RTM1 612 aa11.59□□□□□ -0.55
CRNKL1-204ENST00000490910 CCDC60Q8IWA6 550 aaPredicted RBP11.59□□□□□ -0.55
CRNKL1-204ENST00000490910 SIX5Q8N196 739 aa11.59□□□□□ -0.55
CRNKL1-204ENST00000490910 PLEKHO2Q8TD55 490 aa11.59□□□□□ -0.55
CRNKL1-204ENST00000490910 ZNF518BQ9C0D4 1074 aa11.59□□□□□ -0.55
CRNKL1-204ENST00000490910 NRBP2Q9NSY0 501 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms