RNA–Protein interactions for RNA: ENST00000490831.1

COL27A1-206, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 3

Gene COL27A1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-206ENST00000490831 TXNDC5Q8NBS9 432 aaKnown RBP15.87■□□□□ 0.13
COL27A1-206ENST00000490831 AZIN2Q96A70 460 aa15.87■□□□□ 0.13
COL27A1-206ENST00000490831 TRIM62Q9BVG3 475 aa15.87■□□□□ 0.13
COL27A1-206ENST00000490831 IRX2Q9BZI1 471 aaPredicted RBP15.87■□□□□ 0.13
COL27A1-206ENST00000490831 FANCLQ9NW38 375 aa15.87■□□□□ 0.13
COL27A1-206ENST00000490831 TAB2Q9NYJ8 693 aa15.87■□□□□ 0.13
COL27A1-206ENST00000490831 TMEM63CQ9P1W3 806 aa15.87■□□□□ 0.13
COL27A1-206ENST00000490831 FHOD1Q9Y613 1164 aa15.87■□□□□ 0.13
COL27A1-206ENST00000490831 EML5Q05BV3 1969 aa15.86■□□□□ 0.13
COL27A1-206ENST00000490831 LRRC10BA6NIK2 292 aa15.86■□□□□ 0.13
COL27A1-206ENST00000490831 PRRT4C9JH25 899 aa15.86■□□□□ 0.13
COL27A1-206ENST00000490831 SGK1O00141 431 aa15.86■□□□□ 0.13
COL27A1-206ENST00000490831 MSI1O43347 362 aaKnown RBP15.86■□□□□ 0.13
COL27A1-206ENST00000490831 RPP40O75818 363 aaKnown RBP15.86■□□□□ 0.13
COL27A1-206ENST00000490831 HNRNPLP14866 589 aaKnown RBP eCLIP15.86■□□□□ 0.13
COL27A1-206ENST00000490831 ZNF18P17022 549 aa15.86■□□□□ 0.13
COL27A1-206ENST00000490831 MYL5Q02045 173 aa15.86■□□□□ 0.13
COL27A1-206ENST00000490831 ADGRF1Q5T601 910 aa15.86■□□□□ 0.13
COL27A1-206ENST00000490831 NUGGCQ68CJ6 796 aa15.86■□□□□ 0.13
COL27A1-206ENST00000490831 RNF43Q68DV7 783 aa15.86■□□□□ 0.13
COL27A1-206ENST00000490831 TMEM92Q6UXU6 159 aa15.86■□□□□ 0.13
COL27A1-206ENST00000490831 TOGARAM2Q6ZUX3 1019 aa15.86■□□□□ 0.13
COL27A1-206ENST00000490831 TRMT11Q7Z4G4 463 aaKnown RBP15.86■□□□□ 0.13
COL27A1-206ENST00000490831 SLC47A2Q86VL8 602 aa15.86■□□□□ 0.13
COL27A1-206ENST00000490831 UNC45BQ8IWX7 931 aa15.86■□□□□ 0.13
COL27A1-206ENST00000490831 DCLK2Q8N568 766 aa15.86■□□□□ 0.13
COL27A1-206ENST00000490831 ZNF513Q8N8E2 541 aaPredicted RBP15.86■□□□□ 0.13
COL27A1-206ENST00000490831 TSTD1Q8NFU3 115 aa15.86■□□□□ 0.13
COL27A1-206ENST00000490831 DQX1Q8TE96 717 aaKnown RBP15.86■□□□□ 0.13
COL27A1-206ENST00000490831 SLC2A11Q9BYW1 496 aa15.86■□□□□ 0.13
COL27A1-206ENST00000490831 PLK2Q9NYY3 685 aa15.86■□□□□ 0.13
COL27A1-206ENST00000490831 NCDNQ9UBB6 729 aa15.86■□□□□ 0.13
COL27A1-206ENST00000490831 RAB23Q9ULC3 237 aa15.86■□□□□ 0.13
COL27A1-206ENST00000490831 PES1O00541 588 aaKnown RBP15.85■□□□□ 0.13
COL27A1-206ENST00000490831 CYBBP04839 570 aa15.85■□□□□ 0.13
COL27A1-206ENST00000490831 RETP07949 1114 aa15.85■□□□□ 0.13
COL27A1-206ENST00000490831 GLI1P08151 1106 aa15.85■□□□□ 0.13
COL27A1-206ENST00000490831 PNMA6AP0CW24 399 aaPredicted RBP15.85■□□□□ 0.13
COL27A1-206ENST00000490831 NCAM1P13591 858 aa15.85■□□□□ 0.13
COL27A1-206ENST00000490831 TGM1P22735 817 aa15.85■□□□□ 0.13
COL27A1-206ENST00000490831 EIF4EBP2Q13542 120 aaPredicted RBP15.85■□□□□ 0.13
COL27A1-206ENST00000490831 NCAPHQ15003 741 aa15.85■□□□□ 0.13
COL27A1-206ENST00000490831 MPPE1Q53F39 396 aa15.85■□□□□ 0.13
COL27A1-206ENST00000490831 PRR23BQ6ZRT6 265 aa15.85■□□□□ 0.13
COL27A1-206ENST00000490831 GPR161Q8N6U8 529 aaKnown RBP15.85■□□□□ 0.13
COL27A1-206ENST00000490831 BHMTQ93088 406 aa15.85■□□□□ 0.13
COL27A1-206ENST00000490831 FAM149B1Q96BN6 582 aa15.85■□□□□ 0.13
COL27A1-206ENST00000490831 SLC39A13Q96H72 371 aa15.85■□□□□ 0.13
COL27A1-206ENST00000490831 PIWIL1Q96J94 861 aaKnown RBP15.85■□□□□ 0.13
COL27A1-206ENST00000490831 ZC3H10Q96K80 434 aaKnown RBP15.85■□□□□ 0.13
COL27A1-206ENST00000490831 SERPINB11Q96P15 392 aa15.85■□□□□ 0.13
COL27A1-206ENST00000490831 CPXM1Q96SM3 734 aa15.85■□□□□ 0.13
COL27A1-206ENST00000490831 LSM14BQ9BX40 385 aaKnown RBP15.85■□□□□ 0.13
COL27A1-206ENST00000490831 STK33Q9BYT3 514 aa15.85■□□□□ 0.13
COL27A1-206ENST00000490831 VPS16Q9H269 839 aa15.85■□□□□ 0.13
COL27A1-206ENST00000490831 GANQ9H2C0 597 aa15.85■□□□□ 0.13
COL27A1-206ENST00000490831 HSD3B7Q9H2F3 369 aa15.85■□□□□ 0.13
COL27A1-206ENST00000490831 POPDC2Q9HBU9 364 aa15.85■□□□□ 0.13
COL27A1-206ENST00000490831 ASNSD1Q9NWL6 643 aa15.85■□□□□ 0.13
COL27A1-206ENST00000490831 TJP2Q9UDY2 1190 aa15.85■□□□□ 0.13
COL27A1-206ENST00000490831 LIMA1Q9UHB6 759 aaKnown RBP15.85■□□□□ 0.13
COL27A1-206ENST00000490831 GMEB2Q9UKD1 530 aa15.85■□□□□ 0.13
COL27A1-206ENST00000490831 NAALADL1Q9UQQ1 740 aa15.85■□□□□ 0.13
COL27A1-206ENST00000490831 TLR6Q9Y2C9 796 aa15.85■□□□□ 0.13
COL27A1-206ENST00000490831 DAAM1Q9Y4D1 1078 aa15.85■□□□□ 0.13
COL27A1-206ENST00000490831 SPAG17Q6Q759 2223 aa15.84■□□□□ 0.13
COL27A1-206ENST00000490831 F8VZ95 297 aa15.84■□□□□ 0.13
COL27A1-206ENST00000490831 LRP3O75074 770 aa15.84■□□□□ 0.13
COL27A1-206ENST00000490831 IGLV3-25P01717 112 aa15.84■□□□□ 0.13
COL27A1-206ENST00000490831 CYP11B1P15538 503 aa15.84■□□□□ 0.13
COL27A1-206ENST00000490831 CDH5P33151 784 aaPredicted RBP15.84■□□□□ 0.13
COL27A1-206ENST00000490831 KRT9P35527 623 aa15.84■□□□□ 0.13
COL27A1-206ENST00000490831 TBX4P57082 545 aa15.84■□□□□ 0.13
COL27A1-206ENST00000490831 YWHAZP63104 245 aaKnown RBP15.84■□□□□ 0.13
COL27A1-206ENST00000490831 TYRO3Q06418 890 aa15.84■□□□□ 0.13
COL27A1-206ENST00000490831 RAPGEF1Q13905 1077 aa15.84■□□□□ 0.13
COL27A1-206ENST00000490831 MPP7Q5T2T1 576 aa15.84■□□□□ 0.13
COL27A1-206ENST00000490831 SYPL2Q5VXT5 272 aa15.84■□□□□ 0.13
COL27A1-206ENST00000490831 EGFLAMQ63HQ2 1017 aa15.84■□□□□ 0.13
COL27A1-206ENST00000490831 CEP68Q76N32 757 aa15.84■□□□□ 0.13
COL27A1-206ENST00000490831 CACNA2D4Q7Z3S7 1137 aa15.84■□□□□ 0.13
COL27A1-206ENST00000490831 OLIG1Q8TAK6 271 aa15.84■□□□□ 0.13
COL27A1-206ENST00000490831 DDX1Q92499 740 aaKnown RBP15.84■□□□□ 0.13
COL27A1-206ENST00000490831 LOXL4Q96JB6 756 aa15.84■□□□□ 0.13
COL27A1-206ENST00000490831 PPP1R13BQ96KQ4 1090 aa15.84■□□□□ 0.13
COL27A1-206ENST00000490831 FCRL2Q96LA5 508 aaPredicted RBP15.84■□□□□ 0.13
COL27A1-206ENST00000490831 HINFPQ9BQA5 517 aa15.84■□□□□ 0.13
COL27A1-206ENST00000490831 CD248Q9HCU0 757 aa15.84■□□□□ 0.13
COL27A1-206ENST00000490831 POLMQ9NP87 494 aaPredicted RBP15.84■□□□□ 0.13
COL27A1-206ENST00000490831 ALDH1A2O94788 518 aa15.83■□□□□ 0.12
COL27A1-206ENST00000490831 TPM2P07951 284 aa15.83■□□□□ 0.12
COL27A1-206ENST00000490831 HOXD9P28356 352 aaPredicted RBP15.83■□□□□ 0.12
COL27A1-206ENST00000490831 NTSR1P30989 418 aa15.83■□□□□ 0.12
COL27A1-206ENST00000490831 SLC11A2P49281 568 aa15.83■□□□□ 0.12
COL27A1-206ENST00000490831 COPB1P53618 953 aaKnown RBP15.83■□□□□ 0.12
COL27A1-206ENST00000490831 LPAL2Q16609 132 aa15.83■□□□□ 0.12
COL27A1-206ENST00000490831 FAM133BQ5BKY9 247 aaKnown RBP15.83■□□□□ 0.12
COL27A1-206ENST00000490831 ANO7Q6IWH7 933 aa15.83■□□□□ 0.12
COL27A1-206ENST00000490831 APTXQ7Z2E3 356 aaKnown RBP15.83■□□□□ 0.12
COL27A1-206ENST00000490831 TAC4Q86UU9 113 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms